Protein–RNA interactions for Protein: Q9Y548

YIPF1, Protein YIPF1, humanhuman

Predictions only

Length 306 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
YIPF1Q9Y548 HOMER2P1-201ENST00000455653 964 ntBASIC20.06■□□□□ 0.8
YIPF1Q9Y548 C7orf43-206ENST00000456769 2046 ntTSL 2 BASIC20.06■□□□□ 0.8
YIPF1Q9Y548 REPIN1-210ENST00000482680 1029 ntTSL 2 BASIC20.06■□□□□ 0.8
YIPF1Q9Y548 REEP1-207ENST00000535845 1196 ntTSL 2 BASIC20.06■□□□□ 0.8
YIPF1Q9Y548 NDUFB10-202ENST00000543683 830 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
YIPF1Q9Y548 AL132780.2-201ENST00000557615 1021 ntTSL 3 BASIC20.06■□□□□ 0.8
YIPF1Q9Y548 UBA52-210ENST00000598780 668 ntAPPRIS P1 TSL 3 BASIC20.06■□□□□ 0.8
YIPF1Q9Y548 AL358472.4-201ENST00000633140 710 ntBASIC20.06■□□□□ 0.8
YIPF1Q9Y548 RNF187-203ENST00000639044 708 ntAPPRIS P2 TSL 1 (best) BASIC20.06■□□□□ 0.8
YIPF1Q9Y548 LSR-214ENST00000621372 2274 ntAPPRIS P4 TSL 1 (best) BASIC20.06■□□□□ 0.8
YIPF1Q9Y548 NOL3-211ENST00000568146 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
YIPF1Q9Y548 RAB5A-201ENST00000273047 2536 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
YIPF1Q9Y548 DNM2-205ENST00000585892 2774 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
YIPF1Q9Y548 MTX1-202ENST00000368376 1632 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
YIPF1Q9Y548 HMOX2-208ENST00000570646 2147 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
YIPF1Q9Y548 UBE2E3-209ENST00000602710 1556 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
YIPF1Q9Y548 TBC1D10A-204ENST00000403477 1950 ntAPPRIS ALT2 TSL 2 BASIC20.05■□□□□ 0.8
YIPF1Q9Y548 TSG101-201ENST00000251968 1824 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
YIPF1Q9Y548 WDSUB1-203ENST00000392796 1812 ntAPPRIS P1 TSL 2 BASIC20.05■□□□□ 0.8
YIPF1Q9Y548 BUD23-201ENST00000265758 1230 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
YIPF1Q9Y548 GUCA2B-201ENST00000372581 597 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
YIPF1Q9Y548 AC114763.1-202ENST00000414911 867 ntTSL 3 BASIC20.05■□□□□ 0.8
YIPF1Q9Y548 AC074183.1-201ENST00000439105 782 ntTSL 5 BASIC20.05■□□□□ 0.8
YIPF1Q9Y548 CR769775.1-204ENST00000439760 747 ntTSL 5 BASIC20.05■□□□□ 0.8
YIPF1Q9Y548 AL359075.1-203ENST00000462729 1002 ntBASIC20.05■□□□□ 0.8
YIPF1Q9Y548 AZIN1-AS1-214ENST00000522850 473 ntTSL 3 BASIC20.05■□□□□ 0.8
YIPF1Q9Y548 AP006284.1-202ENST00000527113 527 ntTSL 4 BASIC20.05■□□□□ 0.8
YIPF1Q9Y548 CLN6-204ENST00000564752 900 ntTSL 3 BASIC20.05■□□□□ 0.8
YIPF1Q9Y548 NT5C-210ENST00000582160 860 ntTSL 2 BASIC20.05■□□□□ 0.8
YIPF1Q9Y548 AC243829.1-201ENST00000615128 1059 ntTSL 2 BASIC20.05■□□□□ 0.8
YIPF1Q9Y548 PTAR1-205ENST00000472967 1689 ntTSL 2 BASIC20.05■□□□□ 0.8
YIPF1Q9Y548 ACBD4-215ENST00000592162 1684 ntTSL 5 BASIC20.05■□□□□ 0.8
YIPF1Q9Y548 AC026412.3-201ENST00000605200 1661 ntTSL 5 BASIC20.05■□□□□ 0.8
YIPF1Q9Y548 SEC11C-202ENST00000509791 2054 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
YIPF1Q9Y548 DTX2-212ENST00000446820 1770 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
YIPF1Q9Y548 EDEM1-204ENST00000445686 1363 ntTSL 2 BASIC20.05■□□□□ 0.8
YIPF1Q9Y548 AC243965.2-201ENST00000612576 2671 ntTSL 5 BASIC20.05■□□□□ 0.8
YIPF1Q9Y548 TNFRSF19-202ENST00000382258 1625 ntAPPRIS P4 TSL 1 (best) BASIC20.05■□□□□ 0.8
YIPF1Q9Y548 MSANTD1-203ENST00000507492 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
YIPF1Q9Y548 CLK3-202ENST00000395066 2621 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
YIPF1Q9Y548 OR13J1-201ENST00000377981 1339 ntAPPRIS P1 BASIC20.04■□□□□ 0.8
YIPF1Q9Y548 PEX16-202ENST00000378750 1335 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
YIPF1Q9Y548 HOMEZ-201ENST00000357460 4971 ntAPPRIS P2 TSL 1 (best) BASIC20.04■□□□□ 0.8
YIPF1Q9Y548 OLIG2-202ENST00000382357 2578 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
YIPF1Q9Y548 RDX-202ENST00000405097 2761 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
YIPF1Q9Y548 KREMEN2-206ENST00000575885 1798 ntTSL 2 BASIC20.04■□□□□ 0.8
YIPF1Q9Y548 RSPO1-201ENST00000356545 2621 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
YIPF1Q9Y548 TYMSOS-201ENST00000323813 844 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
YIPF1Q9Y548 NME1-202ENST00000336097 986 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
YIPF1Q9Y548 NME1-203ENST00000393196 940 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
YIPF1Q9Y548 CCNG1-211ENST00000512163 919 ntTSL 2 BASIC20.04■□□□□ 0.8
YIPF1Q9Y548 AC079385.1-202ENST00000549203 569 ntTSL 4 BASIC20.04■□□□□ 0.8
YIPF1Q9Y548 IFI27L2-206ENST00000556727 556 ntTSL 3 BASIC20.04■□□□□ 0.8
YIPF1Q9Y548 ETFA-216ENST00000560726 942 ntTSL 3 BASIC20.04■□□□□ 0.8
YIPF1Q9Y548 JOSD2-204ENST00000598418 996 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
YIPF1Q9Y548 LINC00304-201ENST00000321214 2243 ntTSL 2 BASIC20.04■□□□□ 0.8
YIPF1Q9Y548 HMBS-221ENST00000544387 1351 ntTSL 2 BASIC20.04■□□□□ 0.8
YIPF1Q9Y548 GPR42-201ENST00000454971 1804 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
YIPF1Q9Y548 BEST2-201ENST00000042931 1908 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
YIPF1Q9Y548 CIRBP-201ENST00000320936 1328 ntAPPRIS P3 TSL 1 (best) BASIC20.03■□□□□ 0.8
YIPF1Q9Y548 CIRBP-207ENST00000586472 1303 ntAPPRIS P3 TSL 3 BASIC20.03■□□□□ 0.8
YIPF1Q9Y548 FKBP8-206ENST00000596558 1756 ntAPPRIS ALT1 TSL 2 BASIC20.03■□□□□ 0.8
YIPF1Q9Y548 KCNJ12-202ENST00000583088 5425 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
YIPF1Q9Y548 ZNF276-208ENST00000568064 2203 ntTSL 5 BASIC20.03■□□□□ 0.8
YIPF1Q9Y548 SYTL1-210ENST00000616558 1878 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
YIPF1Q9Y548 FBXO27-201ENST00000292853 2330 ntAPPRIS P2 TSL 1 (best) BASIC20.03■□□□□ 0.8
YIPF1Q9Y548 PER3-203ENST00000377541 1524 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
YIPF1Q9Y548 CXorf40A-208ENST00000434353 1524 ntAPPRIS ALT1 TSL 5 BASIC20.03■□□□□ 0.8
YIPF1Q9Y548 PHB2-203ENST00000535923 1515 ntAPPRIS P2 TSL 5 BASIC20.03■□□□□ 0.8
YIPF1Q9Y548 DMPK-203ENST00000354227 1982 ntTSL 2 BASIC20.03■□□□□ 0.8
YIPF1Q9Y548 NTNG2-202ENST00000393229 4792 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
YIPF1Q9Y548 JPT1-203ENST00000409753 1605 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
YIPF1Q9Y548 RBPMS-210ENST00000520191 1613 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
YIPF1Q9Y548 CTDP1-208ENST00000613122 5866 ntAPPRIS P3 TSL 1 (best) BASIC20.03■□□□□ 0.8
YIPF1Q9Y548 MRPL3-201ENST00000264995 1706 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
YIPF1Q9Y548 FAM129C-205ENST00000595684 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
YIPF1Q9Y548 PTGDS-202ENST00000371625 807 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
YIPF1Q9Y548 AP000523.1-201ENST00000398242 1049 ntBASIC20.03■□□□□ 0.8
YIPF1Q9Y548 IMP3-202ENST00000403490 1237 ntAPPRIS P1 BASIC20.03■□□□□ 0.8
YIPF1Q9Y548 AP006621.4-201ENST00000527021 532 ntTSL 5 BASIC20.03■□□□□ 0.8
YIPF1Q9Y548 TYROBP-209ENST00000589517 415 ntAPPRIS ALT1 TSL 1 (best) BASIC20.03■□□□□ 0.8
YIPF1Q9Y548 AC008622.2-201ENST00000617006 1229 ntBASIC20.03■□□□□ 0.8
YIPF1Q9Y548 C10orf142-201ENST00000619243 1110 ntAPPRIS P2 TSL 2 BASIC20.03■□□□□ 0.8
YIPF1Q9Y548 TMEM114-203ENST00000620492 945 ntAPPRIS P1 TSL 2 BASIC20.03■□□□□ 0.8
YIPF1Q9Y548 ABCC5-204ENST00000392579 1848 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
YIPF1Q9Y548 MOK-201ENST00000361847 1940 ntAPPRIS P3 TSL 1 (best) BASIC20.03■□□□□ 0.8
YIPF1Q9Y548 ARSB-201ENST00000264914 5327 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
YIPF1Q9Y548 ASMTL-202ENST00000381333 2035 ntAPPRIS ALT2 TSL 2 BASIC20.03■□□□□ 0.8
YIPF1Q9Y548 LINC01547-202ENST00000397841 2303 ntTSL 2 BASIC20.03■□□□□ 0.8
YIPF1Q9Y548 MYCN-201ENST00000281043 2602 ntAPPRIS P1 TSL 5 BASIC20.03■□□□□ 0.8
YIPF1Q9Y548 HSD17B1-202ENST00000585807 4982 ntAPPRIS P3 TSL 1 (best) BASIC20.03■□□□□ 0.8
YIPF1Q9Y548 BRSK2-208ENST00000528841 3586 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
YIPF1Q9Y548 KCNK12-201ENST00000327876 6227 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
YIPF1Q9Y548 TRIM3-202ENST00000359518 3042 ntAPPRIS P1 TSL 5 BASIC20.02■□□□□ 0.8
YIPF1Q9Y548 LHX3-202ENST00000371748 2365 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
YIPF1Q9Y548 CTCF-202ENST00000401394 2978 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
YIPF1Q9Y548 DBNL-219ENST00000490734 2004 ntTSL 2 BASIC20.02■□□□□ 0.8
YIPF1Q9Y548 UPK3B-201ENST00000257632 1296 ntAPPRIS P5 TSL 2 BASIC20.02■□□□□ 0.8
YIPF1Q9Y548 PYDC1-201ENST00000302964 813 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
YIPF1Q9Y548 AGTRAP-201ENST00000314340 1107 ntAPPRIS P3 TSL 1 (best) BASIC20.02■□□□□ 0.8
Retrieved 100 of 98,524 protein–RNA pairs in 67.7 ms