Protein–RNA interactions for Protein: Q9Y4Z0

LSM4, U6 snRNA-associated Sm-like protein LSm4, humanhuman

Known RBP Predictions only

Length 139 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LSM4Q9Y4Z0 AC005225.2-202ENST00000617980 408 ntTSL 4 BASIC15.35■□□□□ 0.05
LSM4Q9Y4Z0 FAM197Y4-202ENST00000622692 608 ntBASIC15.35■□□□□ 0.05
LSM4Q9Y4Z0 SMPD3-201ENST00000219334 5453 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
LSM4Q9Y4Z0 ARHGDIA-202ENST00000400721 1568 ntTSL 2 BASIC15.35■□□□□ 0.05
LSM4Q9Y4Z0 ATPAF2-206ENST00000474627 1564 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
LSM4Q9Y4Z0 GCDH-216ENST00000591470 1867 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
LSM4Q9Y4Z0 PRSS12-201ENST00000296498 4809 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
LSM4Q9Y4Z0 EVX1-202ENST00000496902 2955 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
LSM4Q9Y4Z0 SENP6-202ENST00000370010 4644 ntAPPRIS P3 TSL 1 (best) BASIC15.35■□□□□ 0.05
LSM4Q9Y4Z0 MICU2-201ENST00000382374 1920 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
LSM4Q9Y4Z0 PTPA-223ENST00000452489 2526 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
LSM4Q9Y4Z0 SLC47A1-202ENST00000395585 1998 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
LSM4Q9Y4Z0 MPZ-206ENST00000533357 1955 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
LSM4Q9Y4Z0 TEPSIN-201ENST00000300714 2287 ntAPPRIS P2 TSL 1 (best) BASIC15.34■□□□□ 0.05
LSM4Q9Y4Z0 ADARB1-201ENST00000348831 6882 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
LSM4Q9Y4Z0 SOCS2-210ENST00000551556 1716 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
LSM4Q9Y4Z0 SMARCC1-201ENST00000254480 6375 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
LSM4Q9Y4Z0 AP1AR-202ENST00000309703 2337 ntAPPRIS ALT1 TSL 1 (best) BASIC15.34■□□□□ 0.05
LSM4Q9Y4Z0 EDEM1-201ENST00000256497 6146 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
LSM4Q9Y4Z0 SCARF1-202ENST00000348987 2619 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
LSM4Q9Y4Z0 PDLIM2-205ENST00000397761 1491 ntAPPRIS P1 TSL 5 BASIC15.34■□□□□ 0.05
LSM4Q9Y4Z0 MORF4L1-215ENST00000559345 1468 ntTSL 2 BASIC15.34■□□□□ 0.05
LSM4Q9Y4Z0 PGP-201ENST00000333503 2727 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
LSM4Q9Y4Z0 AC009113.1-201ENST00000570267 2443 ntBASIC15.34■□□□□ 0.05
LSM4Q9Y4Z0 ASPHD2-201ENST00000215906 3357 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
LSM4Q9Y4Z0 SMPD1-201ENST00000342245 2452 ntAPPRIS ALT1 TSL 1 (best) BASIC15.34■□□□□ 0.05
LSM4Q9Y4Z0 EFCAB11-202ENST00000538485 1870 ntTSL 2 BASIC15.34■□□□□ 0.05
LSM4Q9Y4Z0 AC092368.3-202ENST00000574180 1591 ntBASIC15.34■□□□□ 0.05
LSM4Q9Y4Z0 ETHE1-201ENST00000292147 963 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
LSM4Q9Y4Z0 LRRC26-201ENST00000371542 1209 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
LSM4Q9Y4Z0 LINC00304-202ENST00000562248 1095 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
LSM4Q9Y4Z0 MIR4497-201ENST00000583208 89 ntBASIC15.34■□□□□ 0.05
LSM4Q9Y4Z0 BRWD1-AS2-201ENST00000603064 1028 ntBASIC15.34■□□□□ 0.05
LSM4Q9Y4Z0 RCAN3-205ENST00000436717 2574 ntTSL 3 BASIC15.34■□□□□ 0.05
LSM4Q9Y4Z0 ZNF768-202ENST00000562803 1999 ntAPPRIS ALT2 TSL 3 BASIC15.34■□□□□ 0.05
LSM4Q9Y4Z0 FOXP4-202ENST00000373057 3300 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
LSM4Q9Y4Z0 HIKESHI-207ENST00000533986 1694 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
LSM4Q9Y4Z0 AC020922.1-201ENST00000591954 3058 ntAPPRIS P1 TSL 5 BASIC15.34■□□□□ 0.05
LSM4Q9Y4Z0 RORA-204ENST00000449337 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
LSM4Q9Y4Z0 KRT87P-201ENST00000529785 1700 ntTSL 2 BASIC15.34■□□□□ 0.05
LSM4Q9Y4Z0 NAT8L-201ENST00000331662 5571 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
LSM4Q9Y4Z0 CPEB2-207ENST00000507071 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
LSM4Q9Y4Z0 MTX1-201ENST00000316721 1441 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
LSM4Q9Y4Z0 DBNDD2-203ENST00000372710 1417 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
LSM4Q9Y4Z0 LZTS2-202ENST00000370223 2883 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
LSM4Q9Y4Z0 LETM1P2-201ENST00000597330 2178 ntBASIC15.34■□□□□ 0.05
LSM4Q9Y4Z0 GMPPA-213ENST00000622191 1473 ntTSL 5 BASIC15.33■□□□□ 0.05
LSM4Q9Y4Z0 B3GALNT2-201ENST00000313984 1874 ntTSL 1 (best) BASIC15.33■□□□□ 0.05
LSM4Q9Y4Z0 MLST8-232ENST00000569417 1870 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.05
LSM4Q9Y4Z0 AC026471.1-201ENST00000564629 3026 ntBASIC15.33■□□□□ 0.05
LSM4Q9Y4Z0 PQLC2-203ENST00000400548 1548 ntTSL 1 (best) BASIC15.33■□□□□ 0.05
LSM4Q9Y4Z0 UPP1-201ENST00000331803 1932 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
LSM4Q9Y4Z0 TMEM191A-208ENST00000450925 1961 ntTSL 2 BASIC15.33■□□□□ 0.05
LSM4Q9Y4Z0 SHANK3-203ENST00000445220 5175 ntAPPRIS ALT2 TSL 5 BASIC15.33■□□□□ 0.04
LSM4Q9Y4Z0 TAF6-211ENST00000453269 2464 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
LSM4Q9Y4Z0 GRK6-201ENST00000355472 2939 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.04
LSM4Q9Y4Z0 BMP1-202ENST00000306385 4229 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
LSM4Q9Y4Z0 PHF12-201ENST00000268756 2957 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
LSM4Q9Y4Z0 GGTLC1-203ENST00000335694 1046 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
LSM4Q9Y4Z0 AVP-201ENST00000380293 619 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
LSM4Q9Y4Z0 PDE6B-202ENST00000429163 2120 ntTSL 2 BASIC15.33■□□□□ 0.04
LSM4Q9Y4Z0 AC073896.1-201ENST00000549318 937 ntAPPRIS P1 TSL 5 BASIC15.33■□□□□ 0.04
LSM4Q9Y4Z0 ATRAID-208ENST00000611786 1256 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
LSM4Q9Y4Z0 SLC38A8-201ENST00000299709 1308 ntAPPRIS P1 TSL 5 BASIC15.33■□□□□ 0.04
LSM4Q9Y4Z0 ZNF843-203ENST00000618063 1765 ntAPPRIS P2 TSL 1 (best) BASIC15.33■□□□□ 0.04
LSM4Q9Y4Z0 KMT5B-203ENST00000401547 2666 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
LSM4Q9Y4Z0 P3H1-204ENST00000397054 2705 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
LSM4Q9Y4Z0 DENND1A-203ENST00000373624 5010 ntAPPRIS P4 TSL 5 BASIC15.33■□□□□ 0.04
LSM4Q9Y4Z0 DTD1-201ENST00000377452 1387 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
LSM4Q9Y4Z0 CCNL2-201ENST00000400809 2305 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
LSM4Q9Y4Z0 PRDM11-201ENST00000424263 1858 ntAPPRIS P3 TSL 2 BASIC15.33■□□□□ 0.04
LSM4Q9Y4Z0 ABCC6-209ENST00000640696 1893 ntTSL 5 BASIC15.33■□□□□ 0.04
LSM4Q9Y4Z0 RGS9BP-201ENST00000334176 2894 ntAPPRIS P1 BASIC15.33■□□□□ 0.04
LSM4Q9Y4Z0 CGRRF1-201ENST00000216420 2057 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
LSM4Q9Y4Z0 CAMKK2-206ENST00000402834 2051 ntAPPRIS P4 TSL 1 (best) BASIC15.32■□□□□ 0.04
LSM4Q9Y4Z0 GRM2-204ENST00000442933 2064 ntTSL 5 BASIC15.32■□□□□ 0.04
LSM4Q9Y4Z0 ZNF385C-201ENST00000436535 1572 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
LSM4Q9Y4Z0 TCAP-201ENST00000309889 2123 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
LSM4Q9Y4Z0 CADPS2-208ENST00000615869 6066 ntAPPRIS ALT1 TSL 5 BASIC15.32■□□□□ 0.04
LSM4Q9Y4Z0 STRN3-202ENST00000357479 2799 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
LSM4Q9Y4Z0 ANKS3-202ENST00000446014 2265 ntTSL 5 BASIC15.32■□□□□ 0.04
LSM4Q9Y4Z0 ST3GAL4-203ENST00000392669 1724 ntAPPRIS ALT1 TSL 1 (best) BASIC15.32■□□□□ 0.04
LSM4Q9Y4Z0 RNH1-206ENST00000438658 1725 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
LSM4Q9Y4Z0 HCK-206ENST00000518730 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
LSM4Q9Y4Z0 AC148477.3-202ENST00000376617 1766 ntTSL 2 BASIC15.32■□□□□ 0.04
LSM4Q9Y4Z0 GTF2IP1-210ENST00000622829 3605 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
LSM4Q9Y4Z0 CXCL3-201ENST00000296026 1075 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
LSM4Q9Y4Z0 METTL27-201ENST00000297873 941 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
LSM4Q9Y4Z0 C6orf132-202ENST00000356542 894 ntAPPRIS ALT2 TSL 2 BASIC15.32■□□□□ 0.04
LSM4Q9Y4Z0 YWHAZ-209ENST00000419477 891 ntAPPRIS P1 TSL 3 BASIC15.32■□□□□ 0.04
LSM4Q9Y4Z0 DLEU2-203ENST00000425586 1267 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
LSM4Q9Y4Z0 AL807752.2-201ENST00000435463 301 ntTSL 3 BASIC15.32■□□□□ 0.04
LSM4Q9Y4Z0 GRAMD1B-209ENST00000533341 707 ntTSL 2 BASIC15.32■□□□□ 0.04
LSM4Q9Y4Z0 AC010531.6-201ENST00000602282 401 ntTSL 2 BASIC15.32■□□□□ 0.04
LSM4Q9Y4Z0 AL024498.1-202ENST00000606652 480 ntTSL 2 BASIC15.32■□□□□ 0.04
LSM4Q9Y4Z0 CTBP2-214ENST00000531469 1918 ntAPPRIS P1 TSL 2 BASIC15.32■□□□□ 0.04
LSM4Q9Y4Z0 GBGT1-208ENST00000540636 1934 ntTSL 2 BASIC15.32■□□□□ 0.04
LSM4Q9Y4Z0 AC007613.1-201ENST00000572811 2597 ntBASIC15.32■□□□□ 0.04
LSM4Q9Y4Z0 AC104581.1-202ENST00000635932 2618 ntBASIC15.32■□□□□ 0.04
LSM4Q9Y4Z0 NXN-202ENST00000537628 1340 ntTSL 3 BASIC15.32■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 24.8 ms