Protein–RNA interactions for Protein: Q9Y2H6

FNDC3A, Fibronectin type-III domain-containing protein 3A, humanhuman

Known RBP Predictions only

Length 1,198 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FNDC3AQ9Y2H6 UBE2Z-201ENST00000360943 3122 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
FNDC3AQ9Y2H6 PIGQ-204ENST00000409527 1915 ntAPPRIS P1 TSL 2 BASIC19.59■□□□□ 0.73
FNDC3AQ9Y2H6 TBC1D4-204ENST00000431480 6347 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
FNDC3AQ9Y2H6 FOXP4-205ENST00000409208 3341 ntAPPRIS P1 TSL 5 BASIC19.59■□□□□ 0.73
FNDC3AQ9Y2H6 CCM2-202ENST00000381112 1881 ntAPPRIS ALT2 TSL 2 BASIC19.59■□□□□ 0.73
FNDC3AQ9Y2H6 MRM1-204ENST00000614766 1857 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
FNDC3AQ9Y2H6 FLYWCH1-201ENST00000253928 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
FNDC3AQ9Y2H6 CLDND2-201ENST00000291715 974 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
FNDC3AQ9Y2H6 AL035541.1-201ENST00000424850 823 ntTSL 2 BASIC19.59■□□□□ 0.73
FNDC3AQ9Y2H6 MCRIP1-201ENST00000455127 1209 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
FNDC3AQ9Y2H6 USP46-AS1-201ENST00000503051 1048 ntTSL 3 BASIC19.59■□□□□ 0.73
FNDC3AQ9Y2H6 HLX-AS1-201ENST00000552026 563 ntTSL 4 BASIC19.59■□□□□ 0.73
FNDC3AQ9Y2H6 SMAGP-206ENST00000604188 433 ntTSL 3 BASIC19.59■□□□□ 0.73
FNDC3AQ9Y2H6 FP475955.1-201ENST00000624937 553 ntTSL 4 BASIC19.59■□□□□ 0.73
FNDC3AQ9Y2H6 FNBP1-203ENST00000443566 5227 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
FNDC3AQ9Y2H6 RGS11-204ENST00000397770 2390 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
FNDC3AQ9Y2H6 USP21-203ENST00000368002 2342 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
FNDC3AQ9Y2H6 GOLGA6L3-201ENST00000507199 1679 ntBASIC19.59■□□□□ 0.73
FNDC3AQ9Y2H6 CRMP1-201ENST00000324989 3146 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
FNDC3AQ9Y2H6 C1orf198-201ENST00000366663 3858 ntAPPRIS P3 TSL 1 (best) BASIC19.58■□□□□ 0.73
FNDC3AQ9Y2H6 AC044802.1-201ENST00000501143 2894 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
FNDC3AQ9Y2H6 KCNN2-207ENST00000610748 2091 ntTSL 3 BASIC19.58■□□□□ 0.73
FNDC3AQ9Y2H6 ADM-207ENST00000530439 1839 ntTSL 2 BASIC19.58■□□□□ 0.73
FNDC3AQ9Y2H6 CAB39-203ENST00000410084 1324 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
FNDC3AQ9Y2H6 CENPH-206ENST00000515001 1305 ntTSL 2 BASIC19.58■□□□□ 0.73
FNDC3AQ9Y2H6 ZIM2-208ENST00000629319 2253 ntAPPRIS P1 TSL 5 BASIC19.58■□□□□ 0.73
FNDC3AQ9Y2H6 POLR1D-203ENST00000399697 2036 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
FNDC3AQ9Y2H6 RCCD1-201ENST00000394258 2689 ntAPPRIS P2 TSL 1 (best) BASIC19.58■□□□□ 0.73
FNDC3AQ9Y2H6 AC098829.1-201ENST00000502344 630 ntTSL 3 BASIC19.58■□□□□ 0.72
FNDC3AQ9Y2H6 GOLGA2P7-203ENST00000557881 896 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
FNDC3AQ9Y2H6 AC100839.1-201ENST00000559589 577 ntTSL 4 BASIC19.58■□□□□ 0.72
FNDC3AQ9Y2H6 NAPSB-206ENST00000562112 1266 ntBASIC19.58■□□□□ 0.72
FNDC3AQ9Y2H6 AC002094.1-201ENST00000591482 1050 ntTSL 2 BASIC19.58■□□□□ 0.72
FNDC3AQ9Y2H6 GOLGA2P10-205ENST00000618267 983 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
FNDC3AQ9Y2H6 CR392000.1-201ENST00000624770 1228 ntBASIC19.58■□□□□ 0.72
FNDC3AQ9Y2H6 AC008735.6-201ENST00000635964 1292 ntAPPRIS P1 TSL 2 BASIC19.58■□□□□ 0.72
FNDC3AQ9Y2H6 PAIP1-203ENST00000436644 1734 ntAPPRIS ALT1 TSL 1 (best) BASIC19.58■□□□□ 0.72
FNDC3AQ9Y2H6 EARS2-206ENST00000563232 1709 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
FNDC3AQ9Y2H6 TPCN2-208ENST00000637342 2856 ntTSL 5 BASIC19.58■□□□□ 0.72
FNDC3AQ9Y2H6 EYA2-210ENST00000611592 2612 ntTSL 5 BASIC19.58■□□□□ 0.72
FNDC3AQ9Y2H6 RABEPK-204ENST00000394125 1466 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
FNDC3AQ9Y2H6 HEMK1-206ENST00000455834 1499 ntAPPRIS P1 TSL 5 BASIC19.58■□□□□ 0.72
FNDC3AQ9Y2H6 DCAKD-208ENST00000614054 2054 ntAPPRIS P1 TSL 2 BASIC19.58■□□□□ 0.72
FNDC3AQ9Y2H6 AMDHD1-201ENST00000266736 2260 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
FNDC3AQ9Y2H6 TLE4-205ENST00000376544 4871 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
FNDC3AQ9Y2H6 LTBP1-203ENST00000404816 6333 ntAPPRIS P4 TSL 5 BASIC19.58■□□□□ 0.72
FNDC3AQ9Y2H6 CADPS-201ENST00000283269 4591 ntAPPRIS P4 TSL 1 (best) BASIC19.58■□□□□ 0.72
FNDC3AQ9Y2H6 COL13A1-205ENST00000398978 3093 ntAPPRIS P4 TSL 5 BASIC19.57■□□□□ 0.72
FNDC3AQ9Y2H6 SPOCK3-215ENST00000510741 1963 ntAPPRIS ALT2 TSL 5 BASIC19.57■□□□□ 0.72
FNDC3AQ9Y2H6 BRSK1-201ENST00000309383 3079 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
FNDC3AQ9Y2H6 PAQR4-203ENST00000572687 2251 ntTSL 2 BASIC19.57■□□□□ 0.72
FNDC3AQ9Y2H6 ACD-214ENST00000620338 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
FNDC3AQ9Y2H6 LETM2-208ENST00000524874 1459 ntTSL 5 BASIC19.57■□□□□ 0.72
FNDC3AQ9Y2H6 RAMP1-204ENST00000409726 734 ntTSL 3 BASIC19.57■□□□□ 0.72
FNDC3AQ9Y2H6 AC103564.1-201ENST00000437330 562 ntTSL 5 BASIC19.57■□□□□ 0.72
FNDC3AQ9Y2H6 RMI2-205ENST00000576027 818 ntTSL 2 BASIC19.57■□□□□ 0.72
FNDC3AQ9Y2H6 TGIF1-222ENST00000577543 729 ntTSL 3 BASIC19.57■□□□□ 0.72
FNDC3AQ9Y2H6 CCDC28A-203ENST00000617445 1240 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
FNDC3AQ9Y2H6 MCTP1-218ENST00000515393 5396 ntAPPRIS P3 TSL 1 (best) BASIC19.57■□□□□ 0.72
FNDC3AQ9Y2H6 TLE3-214ENST00000558939 6004 ntAPPRIS P4 TSL 1 (best) BASIC19.57■□□□□ 0.72
FNDC3AQ9Y2H6 SNX11-203ENST00000452859 1601 ntTSL 2 BASIC19.57■□□□□ 0.72
FNDC3AQ9Y2H6 SOCS2-206ENST00000549122 2391 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
FNDC3AQ9Y2H6 PDE4DIP-214ENST00000479408 2746 ntTSL 5 BASIC19.57■□□□□ 0.72
FNDC3AQ9Y2H6 TNPO2-203ENST00000450764 4993 ntAPPRIS ALT1 TSL 1 (best) BASIC19.57■□□□□ 0.72
FNDC3AQ9Y2H6 UHRF1-203ENST00000615884 2651 ntAPPRIS P1 TSL 2 BASIC19.57■□□□□ 0.72
FNDC3AQ9Y2H6 DPYSL3-202ENST00000398514 5309 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
FNDC3AQ9Y2H6 TMEM189-201ENST00000371650 2222 ntAPPRIS ALT1 TSL 1 (best) BASIC19.56■□□□□ 0.72
FNDC3AQ9Y2H6 WFIKKN1-201ENST00000319070 2028 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
FNDC3AQ9Y2H6 NRP2-206ENST00000417189 2386 ntTSL 2 BASIC19.56■□□□□ 0.72
FNDC3AQ9Y2H6 ISCA1-203ENST00000375991 1958 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
FNDC3AQ9Y2H6 KRT1-201ENST00000252244 2451 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
FNDC3AQ9Y2H6 TERF1P1-201ENST00000311003 1181 ntBASIC19.56■□□□□ 0.72
FNDC3AQ9Y2H6 ING1-202ENST00000338450 1189 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
FNDC3AQ9Y2H6 NPY-202ENST00000405982 565 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
FNDC3AQ9Y2H6 NIFKP9-201ENST00000419265 221 ntBASIC19.56■□□□□ 0.72
FNDC3AQ9Y2H6 AC134772.1-201ENST00000438872 885 ntTSL 3 BASIC19.56■□□□□ 0.72
FNDC3AQ9Y2H6 FITM1-202ENST00000559294 800 ntBASIC19.56■□□□□ 0.72
FNDC3AQ9Y2H6 AC010947.1-201ENST00000623454 693 ntBASIC19.56■□□□□ 0.72
FNDC3AQ9Y2H6 GALNT2-201ENST00000366672 4454 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
FNDC3AQ9Y2H6 WNT7B-202ENST00000409496 2285 ntAPPRIS ALT1 TSL 2 BASIC19.56■□□□□ 0.72
FNDC3AQ9Y2H6 WISP2-201ENST00000190983 1403 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
FNDC3AQ9Y2H6 CCAR2-214ENST00000613179 1421 ntTSL 5 BASIC19.56■□□□□ 0.72
FNDC3AQ9Y2H6 LSM4-203ENST00000593829 1908 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
FNDC3AQ9Y2H6 GCSH-201ENST00000315467 1597 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
FNDC3AQ9Y2H6 WWOX-202ENST00000402655 1594 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
FNDC3AQ9Y2H6 ZNF692-202ENST00000366471 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
FNDC3AQ9Y2H6 DHRS3-204ENST00000616661 1722 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
FNDC3AQ9Y2H6 SLC35B1-201ENST00000240333 1850 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
FNDC3AQ9Y2H6 SHE-201ENST00000304760 6243 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
FNDC3AQ9Y2H6 PNCK-201ENST00000340888 1508 ntAPPRIS P1 TSL 5 BASIC19.56■□□□□ 0.72
FNDC3AQ9Y2H6 C18orf25-204ENST00000615553 2329 ntTSL 5 BASIC19.56■□□□□ 0.72
FNDC3AQ9Y2H6 P2RY6-210ENST00000542092 1674 ntAPPRIS P1 TSL 2 BASIC19.56■□□□□ 0.72
FNDC3AQ9Y2H6 PYCR1-204ENST00000403172 1811 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
FNDC3AQ9Y2H6 ATRN-201ENST00000262919 8633 ntAPPRIS P4 TSL 5 BASIC19.55■□□□□ 0.72
FNDC3AQ9Y2H6 ETFA-202ENST00000433983 1346 ntTSL 2 BASIC19.55■□□□□ 0.72
FNDC3AQ9Y2H6 LGALS9C-212ENST00000583322 1602 ntAPPRIS ALT1 TSL 5 BASIC19.55■□□□□ 0.72
FNDC3AQ9Y2H6 PSMD8-201ENST00000215071 1553 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
FNDC3AQ9Y2H6 CDKN1B-202ENST00000396340 897 ntTSL 3 BASIC19.55■□□□□ 0.72
FNDC3AQ9Y2H6 LINC01122-201ENST00000422723 675 ntTSL 3 BASIC19.55■□□□□ 0.72
FNDC3AQ9Y2H6 KSR1P1-201ENST00000446298 240 ntBASIC19.55■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 22.9 ms