Protein–RNA interactions for Protein: Q9UN70

PCDHGC3, Protocadherin gamma-C3, humanhuman

Predictions only

Length 934 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGC3Q9UN70 FAM197Y1-201ENST00000421178 764 ntBASIC20.27■□□□□ 0.84
PCDHGC3Q9UN70 WDR86-AS1-203ENST00000480632 704 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
PCDHGC3Q9UN70 CHAC1-203ENST00000487220 853 ntTSL 3 BASIC20.27■□□□□ 0.84
PCDHGC3Q9UN70 CXCL2-202ENST00000508487 1218 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
PCDHGC3Q9UN70 ADGRD1-AS1-202ENST00000542980 1277 ntTSL 4 BASIC20.27■□□□□ 0.84
PCDHGC3Q9UN70 GRAP-204ENST00000573099 846 ntTSL 3 BASIC20.27■□□□□ 0.84
PCDHGC3Q9UN70 USP36-216ENST00000589424 970 ntTSL 5 BASIC20.27■□□□□ 0.84
PCDHGC3Q9UN70 AP001412.1-201ENST00000608405 714 ntBASIC20.27■□□□□ 0.84
PCDHGC3Q9UN70 RHOT2-201ENST00000315082 2539 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
PCDHGC3Q9UN70 SLC39A1-209ENST00000537590 2022 ntTSL 2 BASIC20.27■□□□□ 0.84
PCDHGC3Q9UN70 PSPC1-206ENST00000619300 2013 ntAPPRIS P1 TSL 5 BASIC20.27■□□□□ 0.84
PCDHGC3Q9UN70 NPAS1-201ENST00000439365 1341 ntTSL 2 BASIC20.27■□□□□ 0.83
PCDHGC3Q9UN70 SLC25A20-201ENST00000319017 1879 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
PCDHGC3Q9UN70 TH-203ENST00000352909 1889 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
PCDHGC3Q9UN70 TBXA2R-201ENST00000375190 2608 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
PCDHGC3Q9UN70 ATP9A-202ENST00000338821 8106 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
PCDHGC3Q9UN70 GRIN1-208ENST00000371561 5149 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
PCDHGC3Q9UN70 AC098818.2-201ENST00000564925 2320 ntBASIC20.26■□□□□ 0.83
PCDHGC3Q9UN70 BACE2-202ENST00000330333 2993 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
PCDHGC3Q9UN70 MMP28-204ENST00000615136 2033 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
PCDHGC3Q9UN70 FER1L4-211ENST00000616283 1818 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
PCDHGC3Q9UN70 HIST1H2AM-201ENST00000359611 393 ntAPPRIS P1 BASIC20.26■□□□□ 0.83
PCDHGC3Q9UN70 CCDC74B-203ENST00000409128 789 ntAPPRIS ALT2 TSL 2 BASIC20.26■□□□□ 0.83
PCDHGC3Q9UN70 AL359747.1-201ENST00000442370 536 ntTSL 2 BASIC20.26■□□□□ 0.83
PCDHGC3Q9UN70 SGO1-AS1-202ENST00000448208 819 ntTSL 3 BASIC20.26■□□□□ 0.83
PCDHGC3Q9UN70 AF131216.3-201ENST00000525867 1099 ntTSL 2 BASIC20.26■□□□□ 0.83
PCDHGC3Q9UN70 FOSL1-204ENST00000532401 1132 ntTSL 2 BASIC20.26■□□□□ 0.83
PCDHGC3Q9UN70 KDM2B-217ENST00000543852 1188 ntTSL 5 BASIC20.26■□□□□ 0.83
PCDHGC3Q9UN70 AC005786.3-201ENST00000589360 565 ntTSL 3 BASIC20.26■□□□□ 0.83
PCDHGC3Q9UN70 AC130371.2-201ENST00000619443 611 ntBASIC20.26■□□□□ 0.83
PCDHGC3Q9UN70 AC113410.3-201ENST00000623366 203 ntBASIC20.26■□□□□ 0.83
PCDHGC3Q9UN70 AL049637.2-201ENST00000641778 930 ntBASIC20.26■□□□□ 0.83
PCDHGC3Q9UN70 CPZ-202ENST00000360986 2267 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
PCDHGC3Q9UN70 NAGPA-AS1-202ENST00000632058 2265 ntTSL 2 BASIC20.26■□□□□ 0.83
PCDHGC3Q9UN70 FBXL17-205ENST00000542267 5188 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
PCDHGC3Q9UN70 ADORA2A-215ENST00000618076 2630 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
PCDHGC3Q9UN70 KCNIP4-206ENST00000447367 1641 ntTSL 5 BASIC20.26■□□□□ 0.83
PCDHGC3Q9UN70 DRD5-201ENST00000304374 2330 ntAPPRIS P1 BASIC20.26■□□□□ 0.83
PCDHGC3Q9UN70 KRT8P11-201ENST00000409686 1436 ntBASIC20.26■□□□□ 0.83
PCDHGC3Q9UN70 BTNL9-210ENST00000515271 1444 ntTSL 2 BASIC20.26■□□□□ 0.83
PCDHGC3Q9UN70 CD55-201ENST00000314754 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
PCDHGC3Q9UN70 NHLRC1-201ENST00000340650 2248 ntAPPRIS P1 BASIC20.26■□□□□ 0.83
PCDHGC3Q9UN70 CPEB2-202ENST00000345451 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
PCDHGC3Q9UN70 ALG9-214ENST00000614444 2028 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
PCDHGC3Q9UN70 C5orf47-201ENST00000340147 2522 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
PCDHGC3Q9UN70 CLDND1-203ENST00000394181 2170 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
PCDHGC3Q9UN70 CCT5-214ENST00000515676 1997 ntTSL 2 BASIC20.25■□□□□ 0.83
PCDHGC3Q9UN70 GAS6-201ENST00000327773 2490 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
PCDHGC3Q9UN70 SLC6A18-201ENST00000324642 2121 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
PCDHGC3Q9UN70 AK2-201ENST00000354858 1021 ntAPPRIS P4 TSL 1 (best) BASIC20.25■□□□□ 0.83
PCDHGC3Q9UN70 LCE2B-201ENST00000368780 612 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
PCDHGC3Q9UN70 LGALS7-201ENST00000378626 466 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
PCDHGC3Q9UN70 HOXA9-202ENST00000396345 797 ntTSL 2 BASIC20.25■□□□□ 0.83
PCDHGC3Q9UN70 MESTP1-201ENST00000404287 994 ntBASIC20.25■□□□□ 0.83
PCDHGC3Q9UN70 B3GAT3P1-201ENST00000471720 806 ntBASIC20.25■□□□□ 0.83
PCDHGC3Q9UN70 AC011506.1-201ENST00000474329 610 ntBASIC20.25■□□□□ 0.83
PCDHGC3Q9UN70 ROPN1L-202ENST00000503804 1291 ntAPPRIS P1 TSL 2 BASIC20.25■□□□□ 0.83
PCDHGC3Q9UN70 AC087498.1-201ENST00000572493 945 ntAPPRIS P1 BASIC20.25■□□□□ 0.83
PCDHGC3Q9UN70 ANAPC11-207ENST00000572639 578 ntAPPRIS P1 TSL 3 BASIC20.25■□□□□ 0.83
PCDHGC3Q9UN70 AC016582.3-201ENST00000589653 561 ntTSL 4 BASIC20.25■□□□□ 0.83
PCDHGC3Q9UN70 Z99916.2-201ENST00000604037 246 ntBASIC20.25■□□□□ 0.83
PCDHGC3Q9UN70 MIR6786-201ENST00000616843 113 ntBASIC20.25■□□□□ 0.83
PCDHGC3Q9UN70 ARMC6-202ENST00000392335 2383 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
PCDHGC3Q9UN70 NFE2-204ENST00000553070 1523 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
PCDHGC3Q9UN70 THOC3-208ENST00000513482 1796 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
PCDHGC3Q9UN70 THAP7-AS1-203ENST00000452284 2298 ntTSL 2 BASIC20.25■□□□□ 0.83
PCDHGC3Q9UN70 SRSF2-202ENST00000359995 1927 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
PCDHGC3Q9UN70 DMWD-201ENST00000270223 3305 ntAPPRIS P2 TSL 1 (best) BASIC20.25■□□□□ 0.83
PCDHGC3Q9UN70 SLC3A2-202ENST00000377889 1993 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
PCDHGC3Q9UN70 BPIFB3-201ENST00000375494 1454 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
PCDHGC3Q9UN70 TCTA-201ENST00000273590 2146 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
PCDHGC3Q9UN70 MARK2-204ENST00000402010 4728 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
PCDHGC3Q9UN70 HOXA11-201ENST00000006015 2295 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
PCDHGC3Q9UN70 UBE2H-201ENST00000355621 5151 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
PCDHGC3Q9UN70 WDR34-201ENST00000372715 1755 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
PCDHGC3Q9UN70 REEP2-201ENST00000254901 2099 ntAPPRIS P3 TSL 1 (best) BASIC20.24■□□□□ 0.83
PCDHGC3Q9UN70 KRT13-202ENST00000336861 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
PCDHGC3Q9UN70 FAM131A-204ENST00000418281 1664 ntTSL 5 BASIC20.24■□□□□ 0.83
PCDHGC3Q9UN70 PTMS-201ENST00000309083 1139 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
PCDHGC3Q9UN70 IGHV3-73-201ENST00000390636 437 ntAPPRIS P1 BASIC20.24■□□□□ 0.83
PCDHGC3Q9UN70 LINC01122-201ENST00000422723 675 ntTSL 3 BASIC20.24■□□□□ 0.83
PCDHGC3Q9UN70 AC008040.2-201ENST00000461049 708 ntBASIC20.24■□□□□ 0.83
PCDHGC3Q9UN70 PRSS44-201ENST00000515154 1146 ntBASIC20.24■□□□□ 0.83
PCDHGC3Q9UN70 REXO2-216ENST00000544196 452 ntTSL 3 BASIC20.24■□□□□ 0.83
PCDHGC3Q9UN70 AL354712.1-201ENST00000563570 477 ntTSL 3 BASIC20.24■□□□□ 0.83
PCDHGC3Q9UN70 AC011298.2-201ENST00000617989 482 ntBASIC20.24■□□□□ 0.83
PCDHGC3Q9UN70 PTBP1-220ENST00000627714 2201 ntTSL 5 BASIC20.24■□□□□ 0.83
PCDHGC3Q9UN70 ACOT4-201ENST00000326303 2362 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
PCDHGC3Q9UN70 PLK5-201ENST00000334770 2106 ntAPPRIS P2 TSL 2 BASIC20.24■□□□□ 0.83
PCDHGC3Q9UN70 CDK17-203ENST00000543119 2442 ntTSL 2 BASIC20.24■□□□□ 0.83
PCDHGC3Q9UN70 UBE2Z-201ENST00000360943 3122 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
PCDHGC3Q9UN70 ATPIF1-202ENST00000465645 1855 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
PCDHGC3Q9UN70 ADORA2A-201ENST00000337539 2569 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
PCDHGC3Q9UN70 FSCN1P1-201ENST00000568912 1481 ntBASIC20.24■□□□□ 0.83
PCDHGC3Q9UN70 RFC2-213ENST00000621097 1635 ntTSL 5 BASIC20.24■□□□□ 0.83
PCDHGC3Q9UN70 SLC31A2-201ENST00000259392 1785 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
PCDHGC3Q9UN70 RAB7A-201ENST00000265062 2244 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
PCDHGC3Q9UN70 LRWD1-201ENST00000292616 2215 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
PCDHGC3Q9UN70 AC073107.1-201ENST00000633579 1962 ntTSL 5 BASIC20.23■□□□□ 0.83
PCDHGC3Q9UN70 EGFL7-203ENST00000371699 2125 ntAPPRIS P1 TSL 2 BASIC20.23■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 22.5 ms