Protein–RNA interactions for Protein: Q9UMX0

UBQLN1, Ubiquilin-1, humanhuman

Known RBP Predictions only

Length 589 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBQLN1Q9UMX0 EMILIN2-201ENST00000254528 5910 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
UBQLN1Q9UMX0 PHOX2B-201ENST00000226382 3030 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
UBQLN1Q9UMX0 SMIM10L2B-201ENST00000433425 2737 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
UBQLN1Q9UMX0 TAF5L-201ENST00000258281 3112 ntAPPRIS P1 TSL 5 BASIC20.6■□□□□ 0.89
UBQLN1Q9UMX0 AKAP8L-201ENST00000397410 2146 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
UBQLN1Q9UMX0 Z82202.1-201ENST00000623446 1880 ntBASIC20.6■□□□□ 0.89
UBQLN1Q9UMX0 UTP4-201ENST00000314423 2322 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
UBQLN1Q9UMX0 DOC2A-201ENST00000350119 2071 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
UBQLN1Q9UMX0 CDX1-202ENST00000616154 1343 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
UBQLN1Q9UMX0 EEF1A2-201ENST00000217182 2006 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
UBQLN1Q9UMX0 PLEKHH3-201ENST00000293349 2987 ntAPPRIS ALT1 TSL 5 BASIC20.6■□□□□ 0.89
UBQLN1Q9UMX0 STX6-204ENST00000542060 4809 ntTSL 2 BASIC20.6■□□□□ 0.89
UBQLN1Q9UMX0 TMED4-201ENST00000289577 2203 ntTSL 2 BASIC20.6■□□□□ 0.89
UBQLN1Q9UMX0 CHCHD6-201ENST00000290913 1006 ntAPPRIS P2 TSL 1 (best) BASIC20.6■□□□□ 0.89
UBQLN1Q9UMX0 MRPL54-201ENST00000330133 626 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
UBQLN1Q9UMX0 ICAM4-201ENST00000340992 1176 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
UBQLN1Q9UMX0 AFG3L1P-217ENST00000557444 2447 ntBASIC20.6■□□□□ 0.89
UBQLN1Q9UMX0 STARD3-209ENST00000544210 1666 ntTSL 2 BASIC20.6■□□□□ 0.89
UBQLN1Q9UMX0 AC026412.3-201ENST00000605200 1661 ntTSL 5 BASIC20.6■□□□□ 0.89
UBQLN1Q9UMX0 ARHGAP22-204ENST00000417247 2340 ntTSL 2 BASIC20.6■□□□□ 0.89
UBQLN1Q9UMX0 AC092338.2-201ENST00000568827 1415 ntBASIC20.6■□□□□ 0.89
UBQLN1Q9UMX0 ITPKC-201ENST00000263370 3385 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
UBQLN1Q9UMX0 RBPMS-210ENST00000520191 1613 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
UBQLN1Q9UMX0 RFC2-213ENST00000621097 1635 ntTSL 5 BASIC20.6■□□□□ 0.89
UBQLN1Q9UMX0 RUVBL2-206ENST00000595090 2009 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
UBQLN1Q9UMX0 IL17RC-203ENST00000403601 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
UBQLN1Q9UMX0 UCHL5-202ENST00000367449 1507 ntAPPRIS ALT1 TSL 1 (best) BASIC20.59■□□□□ 0.89
UBQLN1Q9UMX0 RABEPK-202ENST00000373538 1504 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
UBQLN1Q9UMX0 AC139491.1-201ENST00000512675 1516 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
UBQLN1Q9UMX0 LIMS2-207ENST00000409808 2315 ntAPPRIS ALT1 TSL 5 BASIC20.59■□□□□ 0.89
UBQLN1Q9UMX0 SNX8-201ENST00000222990 4727 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
UBQLN1Q9UMX0 GOSR2-210ENST00000576910 1891 ntAPPRIS ALT1 TSL 5 BASIC20.59■□□□□ 0.89
UBQLN1Q9UMX0 TMEM53-201ENST00000372235 890 ntTSL 2 BASIC20.59■□□□□ 0.89
UBQLN1Q9UMX0 TIMM17B-201ENST00000376582 950 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
UBQLN1Q9UMX0 AC007663.1-201ENST00000438948 1240 ntBASIC20.59■□□□□ 0.89
UBQLN1Q9UMX0 HMGB3P22-201ENST00000442010 597 ntTSL 2 BASIC20.59■□□□□ 0.89
UBQLN1Q9UMX0 RAB11B-AS1-201ENST00000593581 1013 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
UBQLN1Q9UMX0 FAM87A-204ENST00000613235 858 ntBASIC20.59■□□□□ 0.89
UBQLN1Q9UMX0 AC010653.2-201ENST00000623505 997 ntBASIC20.59■□□□□ 0.89
UBQLN1Q9UMX0 POLI-202ENST00000406285 2030 ntTSL 2 BASIC20.59■□□□□ 0.89
UBQLN1Q9UMX0 ST3GAL3-204ENST00000335430 1805 ntTSL 5 BASIC20.59■□□□□ 0.89
UBQLN1Q9UMX0 FAM3A-215ENST00000447601 1800 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
UBQLN1Q9UMX0 EBF4-202ENST00000380648 2910 ntAPPRIS P2 TSL 5 BASIC20.59■□□□□ 0.89
UBQLN1Q9UMX0 PDIA5-201ENST00000316218 1799 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
UBQLN1Q9UMX0 AC005906.2-207ENST00000639005 1580 ntTSL 5 BASIC20.59■□□□□ 0.89
UBQLN1Q9UMX0 NRXN2-201ENST00000265459 6621 ntAPPRIS P3 TSL 5 BASIC20.58■□□□□ 0.89
UBQLN1Q9UMX0 PCDHA13-203ENST00000617769 2427 ntAPPRIS ALT2 BASIC20.58■□□□□ 0.89
UBQLN1Q9UMX0 HOXB8-201ENST00000239144 1823 ntAPPRIS P2 TSL 2 BASIC20.58■□□□□ 0.89
UBQLN1Q9UMX0 QPCTL-202ENST00000366382 1814 ntTSL 2 BASIC20.58■□□□□ 0.89
UBQLN1Q9UMX0 LMO4-202ENST00000370544 5405 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
UBQLN1Q9UMX0 SSBP3-216ENST00000610401 3168 ntTSL 5 BASIC20.58■□□□□ 0.89
UBQLN1Q9UMX0 CNOT9-209ENST00000627282 1621 ntTSL 2 BASIC20.58■□□□□ 0.89
UBQLN1Q9UMX0 TMEM234-201ENST00000309777 1082 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
UBQLN1Q9UMX0 LRRC23-202ENST00000323702 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.89
UBQLN1Q9UMX0 AC005521.1-201ENST00000393351 872 ntBASIC20.58■□□□□ 0.89
UBQLN1Q9UMX0 AL137013.1-201ENST00000432946 1228 ntBASIC20.58■□□□□ 0.89
UBQLN1Q9UMX0 AL353719.1-201ENST00000566847 864 ntBASIC20.58■□□□□ 0.89
UBQLN1Q9UMX0 AC010531.1-201ENST00000568879 953 ntAPPRIS P1 TSL 4 BASIC20.58■□□□□ 0.89
UBQLN1Q9UMX0 NCK2-205ENST00000451463 1795 ntTSL 2 BASIC20.58■□□□□ 0.89
UBQLN1Q9UMX0 BTD-202ENST00000383778 2261 ntAPPRIS ALT2 TSL 2 BASIC20.58■□□□□ 0.88
UBQLN1Q9UMX0 FARSA-207ENST00000588025 2057 ntTSL 5 BASIC20.58■□□□□ 0.88
UBQLN1Q9UMX0 GPR137-204ENST00000438980 1596 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
UBQLN1Q9UMX0 RELB-202ENST00000505236 2219 ntAPPRIS ALT2 TSL 5 BASIC20.58■□□□□ 0.88
UBQLN1Q9UMX0 YTHDF3-213ENST00000621820 2363 ntTSL 2 BASIC20.58■□□□□ 0.88
UBQLN1Q9UMX0 NFIX-202ENST00000360105 5459 ntTSL 5 BASIC20.58■□□□□ 0.88
UBQLN1Q9UMX0 HNRNPLL-203ENST00000378915 2523 ntTSL 5 BASIC20.58■□□□□ 0.88
UBQLN1Q9UMX0 NRXN1-226ENST00000626899 2543 ntTSL 2 BASIC20.58■□□□□ 0.88
UBQLN1Q9UMX0 MELTF-202ENST00000296351 1650 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
UBQLN1Q9UMX0 OGG1-201ENST00000302003 1655 ntAPPRIS P4 TSL 1 (best) BASIC20.58■□□□□ 0.88
UBQLN1Q9UMX0 PLIN2-201ENST00000276914 1972 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
UBQLN1Q9UMX0 FBXL16-203ENST00000562563 2257 ntTSL 2 BASIC20.57■□□□□ 0.88
UBQLN1Q9UMX0 TEX13A-202ENST00000609007 1349 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
UBQLN1Q9UMX0 INPP4A-201ENST00000074304 6752 ntTSL 5 BASIC20.57■□□□□ 0.88
UBQLN1Q9UMX0 CFAP77-203ENST00000393216 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
UBQLN1Q9UMX0 SEC11C-202ENST00000509791 2054 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
UBQLN1Q9UMX0 ITPKB-203ENST00000429204 6162 ntAPPRIS P1 TSL 5 BASIC20.57■□□□□ 0.88
UBQLN1Q9UMX0 TERF1P1-201ENST00000311003 1181 ntBASIC20.57■□□□□ 0.88
UBQLN1Q9UMX0 INSIG1-202ENST00000342407 1127 ntTSL 2 BASIC20.57■□□□□ 0.88
UBQLN1Q9UMX0 TMEM88B-201ENST00000378821 492 ntAPPRIS P1 TSL 2 BASIC20.57■□□□□ 0.88
UBQLN1Q9UMX0 HMGA1P5-201ENST00000412453 271 ntBASIC20.57■□□□□ 0.88
UBQLN1Q9UMX0 SLC25A48-202ENST00000412661 1148 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
UBQLN1Q9UMX0 ACBD4-204ENST00000431281 2026 ntTSL 5 BASIC20.57■□□□□ 0.88
UBQLN1Q9UMX0 SLC25A48-204ENST00000433282 1111 ntAPPRIS P1 TSL 5 BASIC20.57■□□□□ 0.88
UBQLN1Q9UMX0 AP001059.1-201ENST00000442785 523 ntTSL 3 BASIC20.57■□□□□ 0.88
UBQLN1Q9UMX0 DCTN3-209ENST00000477738 713 ntTSL 3 BASIC20.57■□□□□ 0.88
UBQLN1Q9UMX0 IGHMBP2-205ENST00000539224 785 ntTSL 3 BASIC20.57■□□□□ 0.88
UBQLN1Q9UMX0 AC092865.7-201ENST00000641832 219 ntBASIC20.57■□□□□ 0.88
UBQLN1Q9UMX0 TEX22-201ENST00000451127 2571 ntAPPRIS P1 TSL 2 BASIC20.57■□□□□ 0.88
UBQLN1Q9UMX0 IRX5-202ENST00000394636 2401 ntAPPRIS P3 TSL 3 BASIC20.57■□□□□ 0.88
UBQLN1Q9UMX0 NBL1-209ENST00000548815 1953 ntAPPRIS P3 TSL 3 BASIC20.57■□□□□ 0.88
UBQLN1Q9UMX0 PLAUR-203ENST00000340093 1548 ntAPPRIS P3 TSL 1 (best) BASIC20.57■□□□□ 0.88
UBQLN1Q9UMX0 MLF2-202ENST00000435120 1379 ntAPPRIS P1 TSL 2 BASIC20.57■□□□□ 0.88
UBQLN1Q9UMX0 CSPG5-201ENST00000264723 4080 ntAPPRIS P3 TSL 1 (best) BASIC20.57■□□□□ 0.88
UBQLN1Q9UMX0 DHRS7-201ENST00000216500 2322 ntAPPRIS P1 TSL 5 BASIC20.56■□□□□ 0.88
UBQLN1Q9UMX0 GAS2L1P1-201ENST00000420145 1480 ntBASIC20.56■□□□□ 0.88
UBQLN1Q9UMX0 CYP2D7-203ENST00000433992 1740 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
UBQLN1Q9UMX0 CYP2D7-207ENST00000612115 1734 ntAPPRIS P1 TSL 5 BASIC20.56■□□□□ 0.88
UBQLN1Q9UMX0 GSN-204ENST00000373818 2657 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
UBQLN1Q9UMX0 UBE2E3-209ENST00000602710 1556 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
UBQLN1Q9UMX0 TOR1B-201ENST00000259339 2769 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 24 ms