Protein–RNA interactions for Protein: Q9UMQ6

CAPN11, Calpain-11, humanhuman

Predictions only

Length 739 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN11Q9UMQ6 LRRC29-209ENST00000629962 1303 ntAPPRIS P1 TSL 5 BASIC20.76■□□□□ 0.91
CAPN11Q9UMQ6 SMARCC2-203ENST00000394023 4271 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
CAPN11Q9UMQ6 EPB41L4B-201ENST00000374557 4006 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
CAPN11Q9UMQ6 FGF17-201ENST00000359441 1714 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
CAPN11Q9UMQ6 KXD1-202ENST00000539106 1496 ntAPPRIS P1 TSL 3 BASIC20.75■□□□□ 0.91
CAPN11Q9UMQ6 LRRC36-201ENST00000329956 2395 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
CAPN11Q9UMQ6 RHOBTB2-201ENST00000251822 5451 ntAPPRIS P3 TSL 1 (best) BASIC20.75■□□□□ 0.91
CAPN11Q9UMQ6 CACTIN-201ENST00000221899 2797 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
CAPN11Q9UMQ6 YAP1-201ENST00000282441 5386 ntAPPRIS P3 TSL 1 (best) BASIC20.75■□□□□ 0.91
CAPN11Q9UMQ6 CAVIN3-201ENST00000303927 1174 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
CAPN11Q9UMQ6 HCFC1R1-202ENST00000354679 765 ntTSL 2 BASIC20.75■□□□□ 0.91
CAPN11Q9UMQ6 COA6-202ENST00000366613 641 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
CAPN11Q9UMQ6 AL807752.2-201ENST00000435463 301 ntTSL 3 BASIC20.75■□□□□ 0.91
CAPN11Q9UMQ6 PNMA6B-201ENST00000538162 1200 ntBASIC20.75■□□□□ 0.91
CAPN11Q9UMQ6 KCTD10-211ENST00000540411 866 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
CAPN11Q9UMQ6 LITAF-205ENST00000570904 1118 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
CAPN11Q9UMQ6 AC006435.1-201ENST00000571775 1065 ntTSL 5 BASIC20.75■□□□□ 0.91
CAPN11Q9UMQ6 IGFBP3-211ENST00000615754 792 ntTSL 5 BASIC20.75■□□□□ 0.91
CAPN11Q9UMQ6 KCNQ5-207ENST00000403813 6539 ntAPPRIS ALT2 TSL 5 BASIC20.75■□□□□ 0.91
CAPN11Q9UMQ6 DNAJC28-204ENST00000617313 2237 ntAPPRIS P1 TSL 5 BASIC20.75■□□□□ 0.91
CAPN11Q9UMQ6 TTLL3-209ENST00000426895 2767 ntAPPRIS P2 TSL 2 BASIC20.75■□□□□ 0.91
CAPN11Q9UMQ6 KCNS2-201ENST00000287042 5219 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
CAPN11Q9UMQ6 HAUS4-204ENST00000490506 1447 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
CAPN11Q9UMQ6 MPV17L2-204ENST00000599612 1408 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
CAPN11Q9UMQ6 STX6-204ENST00000542060 4809 ntTSL 2 BASIC20.75■□□□□ 0.91
CAPN11Q9UMQ6 FBXO27-207ENST00000600828 1557 ntAPPRIS ALT1 TSL 5 BASIC20.75■□□□□ 0.91
CAPN11Q9UMQ6 CBFA2T2-201ENST00000342704 2864 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
CAPN11Q9UMQ6 RIMBP3-201ENST00000619918 6105 ntAPPRIS P1 BASIC20.75■□□□□ 0.91
CAPN11Q9UMQ6 SCARF1-202ENST00000348987 2619 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
CAPN11Q9UMQ6 C2CD2-202ENST00000380486 6345 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
CAPN11Q9UMQ6 DYNC1LI2-201ENST00000258198 4515 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
CAPN11Q9UMQ6 PSPN-201ENST00000245810 471 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
CAPN11Q9UMQ6 MED10-201ENST00000255764 1141 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
CAPN11Q9UMQ6 TMPO-201ENST00000261210 820 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
CAPN11Q9UMQ6 CDC42EP2-201ENST00000279249 2023 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
CAPN11Q9UMQ6 VMO1-201ENST00000328739 766 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
CAPN11Q9UMQ6 PSRC1-202ENST00000369904 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
CAPN11Q9UMQ6 TREX2-204ENST00000370212 861 ntTSL 5 BASIC20.74■□□□□ 0.91
CAPN11Q9UMQ6 TREX2-205ENST00000370231 1255 ntAPPRIS P1 TSL 5 BASIC20.74■□□□□ 0.91
CAPN11Q9UMQ6 FAM213B-201ENST00000378424 2765 ntAPPRIS ALT2 TSL 5 BASIC20.74■□□□□ 0.91
CAPN11Q9UMQ6 TREX2-207ENST00000393862 907 ntAPPRIS P1 TSL 2 BASIC20.74■□□□□ 0.91
CAPN11Q9UMQ6 AC097658.1-201ENST00000475555 843 ntBASIC20.74■□□□□ 0.91
CAPN11Q9UMQ6 AKT1-211ENST00000554848 1595 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
CAPN11Q9UMQ6 MIR4758-201ENST00000577688 71 ntBASIC20.74■□□□□ 0.91
CAPN11Q9UMQ6 AC060766.5-201ENST00000590539 871 ntBASIC20.74■□□□□ 0.91
CAPN11Q9UMQ6 VIM-AS1-202ENST00000605833 918 ntTSL 3 BASIC20.74■□□□□ 0.91
CAPN11Q9UMQ6 AC011416.4-201ENST00000639283 2195 ntTSL 5 BASIC20.74■□□□□ 0.91
CAPN11Q9UMQ6 EVC-201ENST00000264956 6431 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
CAPN11Q9UMQ6 LIN28B-AS1-203ENST00000636682 1797 ntTSL 3 BASIC20.74■□□□□ 0.91
CAPN11Q9UMQ6 DHRS12-201ENST00000218981 1970 ntTSL 2 BASIC20.74■□□□□ 0.91
CAPN11Q9UMQ6 BICD1-207ENST00000551848 1962 ntBASIC20.74■□□□□ 0.91
CAPN11Q9UMQ6 CPT2-207ENST00000636867 2643 ntTSL 5 BASIC20.74■□□□□ 0.91
CAPN11Q9UMQ6 PRSS33-201ENST00000293851 1694 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
CAPN11Q9UMQ6 PGR-201ENST00000263463 2496 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
CAPN11Q9UMQ6 PHKA1-204ENST00000373545 6173 ntTSL 5 BASIC20.73■□□□□ 0.91
CAPN11Q9UMQ6 CD72-201ENST00000259633 1548 ntAPPRIS P2 TSL 1 (best) BASIC20.73■□□□□ 0.91
CAPN11Q9UMQ6 ASCC2-202ENST00000397771 2823 ntAPPRIS P1 TSL 5 BASIC20.73■□□□□ 0.91
CAPN11Q9UMQ6 INTS10-201ENST00000397977 2804 ntAPPRIS P1 TSL 2 BASIC20.73■□□□□ 0.91
CAPN11Q9UMQ6 SAE1-201ENST00000270225 2049 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
CAPN11Q9UMQ6 RNH1-201ENST00000354420 1894 ntAPPRIS P1 TSL 5 BASIC20.73■□□□□ 0.91
CAPN11Q9UMQ6 ARHGAP22-203ENST00000374172 2380 ntTSL 2 BASIC20.73■□□□□ 0.91
CAPN11Q9UMQ6 KTI12-201ENST00000371614 1714 ntAPPRIS P1 BASIC20.73■□□□□ 0.91
CAPN11Q9UMQ6 ENTPD8-202ENST00000371506 2222 ntAPPRIS P1 TSL 5 BASIC20.73■□□□□ 0.91
CAPN11Q9UMQ6 ZNF446-203ENST00000594369 2238 ntAPPRIS P2 TSL 1 (best) BASIC20.73■□□□□ 0.91
CAPN11Q9UMQ6 ZNF668-202ENST00000394983 2717 ntAPPRIS P1 TSL 5 BASIC20.73■□□□□ 0.91
CAPN11Q9UMQ6 EMX2-201ENST00000442245 2710 ntTSL 2 BASIC20.73■□□□□ 0.91
CAPN11Q9UMQ6 BEGAIN-202ENST00000443071 2744 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
CAPN11Q9UMQ6 ZNF395-211ENST00000523202 2068 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
CAPN11Q9UMQ6 CCNA1-202ENST00000440264 1758 ntAPPRIS P1 TSL 2 BASIC20.73■□□□□ 0.91
CAPN11Q9UMQ6 TSPY6P-201ENST00000448518 926 ntBASIC20.73■□□□□ 0.91
CAPN11Q9UMQ6 AC006970.2-201ENST00000450065 779 ntBASIC20.73■□□□□ 0.91
CAPN11Q9UMQ6 AC092849.2-201ENST00000492523 333 ntTSL 3 BASIC20.73■□□□□ 0.91
CAPN11Q9UMQ6 RBPJL-203ENST00000372743 1623 ntAPPRIS ALT1 TSL 1 (best) BASIC20.73■□□□□ 0.91
CAPN11Q9UMQ6 ARSA-203ENST00000395619 1824 ntAPPRIS P1 TSL 5 BASIC20.73■□□□□ 0.91
CAPN11Q9UMQ6 TXNRD3-205ENST00000640797 1824 ntAPPRIS ALT2 TSL 2 BASIC20.73■□□□□ 0.91
CAPN11Q9UMQ6 APLP2-210ENST00000528499 2530 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
CAPN11Q9UMQ6 AC020922.1-201ENST00000591954 3058 ntAPPRIS P1 TSL 5 BASIC20.73■□□□□ 0.91
CAPN11Q9UMQ6 RIPK2-201ENST00000220751 2584 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
CAPN11Q9UMQ6 PSTPIP1-203ENST00000558012 1896 ntAPPRIS P2 TSL 1 (best) BASIC20.73■□□□□ 0.91
CAPN11Q9UMQ6 PROB1-201ENST00000434752 5122 ntAPPRIS P1 BASIC20.73■□□□□ 0.91
CAPN11Q9UMQ6 LLGL2-203ENST00000392550 3509 ntAPPRIS P2 TSL 1 (best) BASIC20.73■□□□□ 0.91
CAPN11Q9UMQ6 ADGRB1-201ENST00000323289 5527 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
CAPN11Q9UMQ6 PRSS12-201ENST00000296498 4809 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
CAPN11Q9UMQ6 ZNF302-206ENST00000505242 2849 ntAPPRIS P3 TSL 1 (best) BASIC20.73■□□□□ 0.91
CAPN11Q9UMQ6 AKAP17A-201ENST00000313871 3204 ntAPPRIS P2 TSL 1 (best) BASIC20.72■□□□□ 0.91
CAPN11Q9UMQ6 KXD1-203ENST00000540691 1592 ntAPPRIS P1 TSL 3 BASIC20.72■□□□□ 0.91
CAPN11Q9UMQ6 NPEPL1-203ENST00000525817 1780 ntTSL 2 BASIC20.72■□□□□ 0.91
CAPN11Q9UMQ6 MTSS1L-201ENST00000338779 4992 ntAPPRIS P2 TSL 1 (best) BASIC20.72■□□□□ 0.91
CAPN11Q9UMQ6 BMP1-202ENST00000306385 4229 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
CAPN11Q9UMQ6 NPTX2-201ENST00000265634 2700 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
CAPN11Q9UMQ6 TEKT5-201ENST00000283025 1612 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
CAPN11Q9UMQ6 LGALS9C-212ENST00000583322 1602 ntAPPRIS ALT1 TSL 5 BASIC20.72■□□□□ 0.91
CAPN11Q9UMQ6 EWSR1-207ENST00000406548 2207 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
CAPN11Q9UMQ6 CDC42EP5-201ENST00000301200 864 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
CAPN11Q9UMQ6 SLC29A4P1-201ENST00000398760 971 ntBASIC20.72■□□□□ 0.91
CAPN11Q9UMQ6 ZPBP-203ENST00000419417 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
CAPN11Q9UMQ6 AL161908.1-201ENST00000451449 449 ntTSL 2 BASIC20.72■□□□□ 0.91
CAPN11Q9UMQ6 AC008443.1-203ENST00000505151 886 ntTSL 2 BASIC20.72■□□□□ 0.91
CAPN11Q9UMQ6 SNAP23-210ENST00000564153 775 ntTSL 2 BASIC20.72■□□□□ 0.91
CAPN11Q9UMQ6 Z97986.1-201ENST00000565879 476 ntTSL 5 BASIC20.72■□□□□ 0.91
Retrieved 100 of 98,524 protein–RNA pairs in 27.5 ms