Protein–RNA interactions for Protein: Q9UBX1

CTSF, Cathepsin F, humanhuman

Predictions only

Length 484 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTSFQ9UBX1 KRTAP5-AS1-201ENST00000424148 2265 ntTSL 2 BASIC18.06■□□□□ 0.48
CTSFQ9UBX1 AGAP1-205ENST00000409538 6138 ntTSL 5 BASIC18.06■□□□□ 0.48
CTSFQ9UBX1 ZIM2-206ENST00000599935 2226 ntAPPRIS P1 TSL 5 BASIC18.06■□□□□ 0.48
CTSFQ9UBX1 TRMU-201ENST00000290846 1940 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
CTSFQ9UBX1 GSTM4-201ENST00000326729 1321 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
CTSFQ9UBX1 TOR1B-201ENST00000259339 2769 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
CTSFQ9UBX1 STRN4-202ENST00000391910 3628 ntAPPRIS ALT1 TSL 5 BASIC18.06■□□□□ 0.48
CTSFQ9UBX1 PCCB-208ENST00000468777 1877 ntAPPRIS ALT2 TSL 3 BASIC18.06■□□□□ 0.48
CTSFQ9UBX1 DEDD2-204ENST00000595337 1894 ntAPPRIS P3 TSL 3 BASIC18.06■□□□□ 0.48
CTSFQ9UBX1 POMZP3-201ENST00000275569 1259 ntTSL 2 BASIC18.06■□□□□ 0.48
CTSFQ9UBX1 CHCHD6-201ENST00000290913 1006 ntAPPRIS P2 TSL 1 (best) BASIC18.06■□□□□ 0.48
CTSFQ9UBX1 DGCR6-201ENST00000331444 1214 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
CTSFQ9UBX1 CKS1B-203ENST00000368439 912 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
CTSFQ9UBX1 ERICH4-201ENST00000378187 946 ntAPPRIS P1 TSL 5 BASIC18.06■□□□□ 0.48
CTSFQ9UBX1 TRPT1-203ENST00000394547 865 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
CTSFQ9UBX1 UBE2F-205ENST00000414443 2100 ntTSL 2 BASIC18.06■□□□□ 0.48
CTSFQ9UBX1 AC005056.1-201ENST00000435932 532 ntTSL 4 BASIC18.06■□□□□ 0.48
CTSFQ9UBX1 AC098864.1-204ENST00000513752 805 ntTSL 4 BASIC18.06■□□□□ 0.48
CTSFQ9UBX1 LY6E-211ENST00000521699 1256 ntAPPRIS P2 TSL 5 BASIC18.06■□□□□ 0.48
CTSFQ9UBX1 AC010203.1-204ENST00000548782 407 ntBASIC18.06■□□□□ 0.48
CTSFQ9UBX1 KANSL1-AS1-203ENST00000572973 424 ntTSL 3 BASIC18.06■□□□□ 0.48
CTSFQ9UBX1 UBE2E1-201ENST00000306627 1511 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
CTSFQ9UBX1 SLC22A18-202ENST00000347936 1542 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
CTSFQ9UBX1 ARHGAP22-204ENST00000417247 2340 ntTSL 2 BASIC18.06■□□□□ 0.48
CTSFQ9UBX1 TREX1-205ENST00000625293 1783 ntBASIC18.06■□□□□ 0.48
CTSFQ9UBX1 GNB1-201ENST00000378609 3132 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
CTSFQ9UBX1 PRDM8-202ENST00000415738 3124 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
CTSFQ9UBX1 NAT6-204ENST00000443094 1464 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
CTSFQ9UBX1 SHISA7-201ENST00000376325 6033 ntAPPRIS P2 TSL 2 BASIC18.06■□□□□ 0.48
CTSFQ9UBX1 TREX2-203ENST00000338525 2116 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
CTSFQ9UBX1 KANK4-202ENST00000354381 2103 ntTSL 2 BASIC18.05■□□□□ 0.48
CTSFQ9UBX1 MTX1-202ENST00000368376 1632 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
CTSFQ9UBX1 AC007743.1-203ENST00000447423 1623 ntTSL 2 BASIC18.05■□□□□ 0.48
CTSFQ9UBX1 PI4KB-213ENST00000529142 2603 ntTSL 2 BASIC18.05■□□□□ 0.48
CTSFQ9UBX1 ST3GAL3-205ENST00000347631 1324 ntTSL 5 BASIC18.05■□□□□ 0.48
CTSFQ9UBX1 DDAH2-211ENST00000375787 1330 ntAPPRIS P1 TSL 5 BASIC18.05■□□□□ 0.48
CTSFQ9UBX1 RAX-202ENST00000334889 3197 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
CTSFQ9UBX1 ACAA1-201ENST00000301810 1540 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
CTSFQ9UBX1 AL390860.1-201ENST00000449298 1541 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
CTSFQ9UBX1 COL15A1-201ENST00000375001 5496 ntAPPRIS P2 TSL 1 (best) BASIC18.05■□□□□ 0.48
CTSFQ9UBX1 RTBDN-202ENST00000393233 1000 ntAPPRIS ALT2 TSL 3 BASIC18.05■□□□□ 0.48
CTSFQ9UBX1 SLC25A1P2-201ENST00000430693 912 ntBASIC18.05■□□□□ 0.48
CTSFQ9UBX1 CT47A1-201ENST00000433030 1288 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
CTSFQ9UBX1 HMGB3P22-201ENST00000442010 597 ntTSL 2 BASIC18.05■□□□□ 0.48
CTSFQ9UBX1 AC128688.1-201ENST00000487626 519 ntBASIC18.05■□□□□ 0.48
CTSFQ9UBX1 SLC52A2-205ENST00000526752 710 ntTSL 3 BASIC18.05■□□□□ 0.48
CTSFQ9UBX1 PSMD9-208ENST00000542602 516 ntTSL 3 BASIC18.05■□□□□ 0.48
CTSFQ9UBX1 AC116562.4-202ENST00000641738 218 ntBASIC18.05■□□□□ 0.48
CTSFQ9UBX1 FBXL18-203ENST00000453700 1932 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
CTSFQ9UBX1 ETS1-207ENST00000531611 2134 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
CTSFQ9UBX1 IKBKG-207ENST00000611071 2103 ntAPPRIS P3 TSL 1 (best) BASIC18.05■□□□□ 0.48
CTSFQ9UBX1 HIKESHI-207ENST00000533986 1694 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
CTSFQ9UBX1 KLC1-208ENST00000452929 2453 ntTSL 5 BASIC18.05■□□□□ 0.48
CTSFQ9UBX1 SIX5-201ENST00000317578 3318 ntAPPRIS P2 TSL 1 (best) BASIC18.05■□□□□ 0.48
CTSFQ9UBX1 INSM2-201ENST00000307169 3013 ntAPPRIS P1 BASIC18.04■□□□□ 0.48
CTSFQ9UBX1 KCNC2-204ENST00000540018 2168 ntAPPRIS ALT2 TSL 2 BASIC18.04■□□□□ 0.48
CTSFQ9UBX1 MPZL1-201ENST00000359523 5010 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
CTSFQ9UBX1 TUBA8-201ENST00000316027 1518 ntTSL 2 BASIC18.04■□□□□ 0.48
CTSFQ9UBX1 CXXC4-201ENST00000394767 5565 ntAPPRIS P1 TSL 5 BASIC18.04■□□□□ 0.48
CTSFQ9UBX1 SCYL2-201ENST00000360820 5779 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
CTSFQ9UBX1 NAB2-202ENST00000342556 2318 ntTSL 5 BASIC18.04■□□□□ 0.48
CTSFQ9UBX1 ZNF707-202ENST00000418203 2661 ntAPPRIS P1 TSL 5 BASIC18.04■□□□□ 0.48
CTSFQ9UBX1 MMP11-201ENST00000215743 2291 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
CTSFQ9UBX1 AP000679.1-202ENST00000319763 2081 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
CTSFQ9UBX1 PCSK6-214ENST00000611716 4409 ntAPPRIS P4 TSL 1 (best) BASIC18.04■□□□□ 0.48
CTSFQ9UBX1 IL17C-201ENST00000244241 1044 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
CTSFQ9UBX1 LRRC23-202ENST00000323702 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
CTSFQ9UBX1 KRT17P2-202ENST00000326333 1174 ntTSL 2 BASIC18.04■□□□□ 0.48
CTSFQ9UBX1 TMEM88B-201ENST00000378821 492 ntAPPRIS P1 TSL 2 BASIC18.04■□□□□ 0.48
CTSFQ9UBX1 SHBG-203ENST00000416273 1042 ntAPPRIS ALT2 TSL 3 BASIC18.04■□□□□ 0.48
CTSFQ9UBX1 CCR12P-201ENST00000446203 998 ntBASIC18.04■□□□□ 0.48
CTSFQ9UBX1 SHBG-215ENST00000575903 1196 ntTSL 3 BASIC18.04■□□□□ 0.48
CTSFQ9UBX1 MARCH9-201ENST00000266643 2982 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
CTSFQ9UBX1 FAM118A-202ENST00000405673 1612 ntTSL 5 BASIC18.04■□□□□ 0.48
CTSFQ9UBX1 AC073508.3-201ENST00000619697 1419 ntBASIC18.04■□□□□ 0.48
CTSFQ9UBX1 CSPG5-201ENST00000264723 4080 ntAPPRIS P3 TSL 1 (best) BASIC18.04■□□□□ 0.48
CTSFQ9UBX1 DNASE1L2-203ENST00000564065 2194 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
CTSFQ9UBX1 PLSCR3-212ENST00000576201 1965 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
CTSFQ9UBX1 PVRIG-201ENST00000317271 1583 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
CTSFQ9UBX1 SMARCD1-201ENST00000381513 3237 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
CTSFQ9UBX1 LGALS9-202ENST00000313648 1378 ntTSL 3 BASIC18.04■□□□□ 0.48
CTSFQ9UBX1 BEST2-201ENST00000042931 1908 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
CTSFQ9UBX1 SLC11A2-208ENST00000546743 1740 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
CTSFQ9UBX1 B3GALNT2-201ENST00000313984 1874 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
CTSFQ9UBX1 ENGASE-205ENST00000579016 2579 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
CTSFQ9UBX1 HOXB6-201ENST00000225648 1660 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
CTSFQ9UBX1 KRAS-203ENST00000556131 1696 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
CTSFQ9UBX1 WFIKKN1-201ENST00000319070 2028 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
CTSFQ9UBX1 DALRD3-201ENST00000313778 1968 ntTSL 2 BASIC18.03■□□□□ 0.48
CTSFQ9UBX1 METTL5-201ENST00000260953 1010 ntAPPRIS P2 TSL 1 (best) BASIC18.03■□□□□ 0.48
CTSFQ9UBX1 TNNT3-206ENST00000381579 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
CTSFQ9UBX1 AC134772.1-201ENST00000438872 885 ntTSL 3 BASIC18.03■□□□□ 0.48
CTSFQ9UBX1 SELENOF-207ENST00000611507 1785 ntTSL 5 BASIC18.03■□□□□ 0.48
CTSFQ9UBX1 FAM87B-201ENST00000326734 1947 ntTSL 2 BASIC18.03■□□□□ 0.48
CTSFQ9UBX1 MAP4K4-210ENST00000425019 4403 ntTSL 5 BASIC18.03■□□□□ 0.48
CTSFQ9UBX1 ACD-214ENST00000620338 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
CTSFQ9UBX1 PPM1L-204ENST00000497343 1589 ntTSL 2 BASIC18.03■□□□□ 0.48
CTSFQ9UBX1 MCC-208ENST00000514701 2855 ntTSL 2 BASIC18.03■□□□□ 0.48
CTSFQ9UBX1 EPS8L1-201ENST00000201647 2536 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
CTSFQ9UBX1 EML3-217ENST00000531557 2509 ntTSL 5 BASIC18.03■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 60.5 ms