Protein–RNA interactions for Protein: Q9UBU9

NXF1, Nuclear RNA export factor 1, humanhuman

Known RBP Predictions only

Length 619 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NXF1Q9UBU9 TM9SF1-203ENST00000524835 1938 ntTSL 2 BASIC20.63■□□□□ 0.89
NXF1Q9UBU9 AC087482.1-204ENST00000636067 2431 ntTSL 5 BASIC20.63■□□□□ 0.89
NXF1Q9UBU9 FN3KRP-201ENST00000269373 1849 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
NXF1Q9UBU9 TSPAN14-205ENST00000372158 1095 ntAPPRIS P1 TSL 5 BASIC20.63■□□□□ 0.89
NXF1Q9UBU9 VSIG2-202ENST00000403470 1191 ntTSL 2 BASIC20.63■□□□□ 0.89
NXF1Q9UBU9 BX322234.1-201ENST00000444188 980 ntTSL 3 BASIC20.63■□□□□ 0.89
NXF1Q9UBU9 AC091390.4-202ENST00000476426 537 ntBASIC20.63■□□□□ 0.89
NXF1Q9UBU9 PACRGL-207ENST00000502938 810 ntTSL 4 BASIC20.63■□□□□ 0.89
NXF1Q9UBU9 AC004803.1-203ENST00000539259 501 ntTSL 2 BASIC20.63■□□□□ 0.89
NXF1Q9UBU9 ZNF667-AS1-206ENST00000591797 535 ntTSL 5 BASIC20.63■□□□□ 0.89
NXF1Q9UBU9 AC130371.2-201ENST00000619443 611 ntBASIC20.63■□□□□ 0.89
NXF1Q9UBU9 FAM19A4-201ENST00000295569 2292 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
NXF1Q9UBU9 AGAP3-202ENST00000397238 3225 ntAPPRIS P2 TSL 1 (best) BASIC20.63■□□□□ 0.89
NXF1Q9UBU9 ANKRD29-201ENST00000322980 1658 ntTSL 2 BASIC20.63■□□□□ 0.89
NXF1Q9UBU9 SLC34A3-201ENST00000361134 2124 ntAPPRIS P1 TSL 2 BASIC20.63■□□□□ 0.89
NXF1Q9UBU9 JMJD4-202ENST00000438896 2502 ntTSL 2 BASIC20.63■□□□□ 0.89
NXF1Q9UBU9 EARS2-210ENST00000564501 2027 ntTSL 5 BASIC20.63■□□□□ 0.89
NXF1Q9UBU9 SMPD3-201ENST00000219334 5453 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
NXF1Q9UBU9 MFSD1-219ENST00000622669 2361 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
NXF1Q9UBU9 PRKAG2-203ENST00000418337 2318 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
NXF1Q9UBU9 NKX2-1-202ENST00000498187 2338 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
NXF1Q9UBU9 TMEM25-203ENST00000354284 1456 ntTSL 2 BASIC20.62■□□□□ 0.89
NXF1Q9UBU9 BPIFB3-201ENST00000375494 1454 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
NXF1Q9UBU9 RASSF1-202ENST00000357043 1864 ntAPPRIS P3 TSL 1 (best) BASIC20.62■□□□□ 0.89
NXF1Q9UBU9 ADGRB1-201ENST00000323289 5527 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
NXF1Q9UBU9 LRRC23-207ENST00000433346 1387 ntTSL 5 BASIC20.62■□□□□ 0.89
NXF1Q9UBU9 SET-201ENST00000322030 2915 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
NXF1Q9UBU9 TLE3-201ENST00000317509 5207 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
NXF1Q9UBU9 ZNF331-214ENST00000511154 2120 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
NXF1Q9UBU9 TPD52-209ENST00000518937 2856 ntTSL 2 BASIC20.62■□□□□ 0.89
NXF1Q9UBU9 CENPA-201ENST00000233505 1299 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
NXF1Q9UBU9 DERL1-203ENST00000419562 918 ntTSL 2 BASIC20.62■□□□□ 0.89
NXF1Q9UBU9 CHAC1-203ENST00000487220 853 ntTSL 3 BASIC20.62■□□□□ 0.89
NXF1Q9UBU9 SMAGP-204ENST00000603838 816 ntTSL 2 BASIC20.62■□□□□ 0.89
NXF1Q9UBU9 AC097662.2-201ENST00000641359 267 ntAPPRIS P1 BASIC20.62■□□□□ 0.89
NXF1Q9UBU9 SMARCB1-204ENST00000407422 1643 ntAPPRIS ALT1 TSL 1 (best) BASIC20.62■□□□□ 0.89
NXF1Q9UBU9 MEN1-209ENST00000394376 3034 ntAPPRIS P3 TSL 5 BASIC20.62■□□□□ 0.89
NXF1Q9UBU9 SLC25A3-201ENST00000188376 1909 ntAPPRIS ALT1 TSL 1 (best) BASIC20.62■□□□□ 0.89
NXF1Q9UBU9 CYP2E1-205ENST00000463117 1912 ntAPPRIS P1 TSL 5 BASIC20.62■□□□□ 0.89
NXF1Q9UBU9 GJB3-202ENST00000373366 2217 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
NXF1Q9UBU9 PCID2-202ENST00000337344 1898 ntAPPRIS P1 TSL 2 BASIC20.62■□□□□ 0.89
NXF1Q9UBU9 KIF26A-202ENST00000423312 5649 ntAPPRIS P2 TSL 5 BASIC20.62■□□□□ 0.89
NXF1Q9UBU9 ANXA8L1-203ENST00000613703 1874 ntTSL 2 BASIC20.62■□□□□ 0.89
NXF1Q9UBU9 HOXC4-201ENST00000303406 1524 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
NXF1Q9UBU9 AL032819.2-201ENST00000624543 2162 ntBASIC20.62■□□□□ 0.89
NXF1Q9UBU9 MRM3-201ENST00000304478 1809 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
NXF1Q9UBU9 TMEM234-203ENST00000373593 1411 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
NXF1Q9UBU9 AKIRIN2-201ENST00000257787 1662 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
NXF1Q9UBU9 MELTF-202ENST00000296351 1650 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
NXF1Q9UBU9 STARD3-209ENST00000544210 1666 ntTSL 2 BASIC20.61■□□□□ 0.89
NXF1Q9UBU9 DUT-202ENST00000455976 1935 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
NXF1Q9UBU9 DDAH2-211ENST00000375787 1330 ntAPPRIS P1 TSL 5 BASIC20.61■□□□□ 0.89
NXF1Q9UBU9 EIF2B1-201ENST00000424014 2477 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
NXF1Q9UBU9 HOXA9-202ENST00000396345 797 ntTSL 2 BASIC20.61■□□□□ 0.89
NXF1Q9UBU9 MDK-205ENST00000405308 1166 ntAPPRIS P2 TSL 2 BASIC20.61■□□□□ 0.89
NXF1Q9UBU9 CNEP1R1-203ENST00000458059 2965 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
NXF1Q9UBU9 PHF11-218ENST00000496623 1173 ntAPPRIS ALT2 TSL 2 BASIC20.61■□□□□ 0.89
NXF1Q9UBU9 CDC42EP2-202ENST00000533419 1279 ntAPPRIS P1 TSL 3 BASIC20.61■□□□□ 0.89
NXF1Q9UBU9 FOXN3-AS1-201ENST00000555562 1077 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
NXF1Q9UBU9 NRL-206ENST00000561028 2103 ntAPPRIS P1 TSL 2 BASIC20.61■□□□□ 0.89
NXF1Q9UBU9 LINC02256-201ENST00000561999 366 ntTSL 3 BASIC20.61■□□□□ 0.89
NXF1Q9UBU9 KANK3-205ENST00000610351 1191 ntTSL 5 BASIC20.61■□□□□ 0.89
NXF1Q9UBU9 AL590094.1-202ENST00000634619 1131 ntTSL 5 BASIC20.61■□□□□ 0.89
NXF1Q9UBU9 ZNF324B-202ENST00000545523 2368 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
NXF1Q9UBU9 SUDS3-204ENST00000543473 4897 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
NXF1Q9UBU9 DOC2A-201ENST00000350119 2071 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
NXF1Q9UBU9 DUSP1-201ENST00000239223 2019 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
NXF1Q9UBU9 BHLHE22-201ENST00000321870 3262 ntAPPRIS P1 BASIC20.61■□□□□ 0.89
NXF1Q9UBU9 LTBP4-201ENST00000204005 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
NXF1Q9UBU9 TBC1D4-201ENST00000377625 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
NXF1Q9UBU9 SBDS-201ENST00000246868 1631 ntAPPRIS P2 TSL 1 (best) BASIC20.6■□□□□ 0.89
NXF1Q9UBU9 OTOP2-201ENST00000331427 2147 ntAPPRIS P1 TSL 5 BASIC20.6■□□□□ 0.89
NXF1Q9UBU9 LRPPRC-202ENST00000409659 1610 ntTSL 5 BASIC20.6■□□□□ 0.89
NXF1Q9UBU9 PPFIA1-201ENST00000253925 5234 ntAPPRIS P4 TSL 1 (best) BASIC20.6■□□□□ 0.89
NXF1Q9UBU9 TM7SF3-201ENST00000343028 2709 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
NXF1Q9UBU9 SPNS1-201ENST00000311008 2208 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
NXF1Q9UBU9 SPSB1-203ENST00000377399 1007 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
NXF1Q9UBU9 HDAC11-205ENST00000404548 577 ntTSL 4 BASIC20.6■□□□□ 0.89
NXF1Q9UBU9 AL162231.1-203ENST00000416454 465 ntAPPRIS ALT2 TSL 2 BASIC20.6■□□□□ 0.89
NXF1Q9UBU9 AL390719.1-201ENST00000427998 977 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
NXF1Q9UBU9 RBM17P1-201ENST00000453646 1190 ntBASIC20.6■□□□□ 0.89
NXF1Q9UBU9 AC134349.1-201ENST00000543969 385 ntTSL 3 BASIC20.6■□□□□ 0.89
NXF1Q9UBU9 AC100839.1-201ENST00000559589 577 ntTSL 4 BASIC20.6■□□□□ 0.89
NXF1Q9UBU9 TGIF1-222ENST00000577543 729 ntTSL 3 BASIC20.6■□□□□ 0.89
NXF1Q9UBU9 GABBR1-202ENST00000376977 1739 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
NXF1Q9UBU9 P3H4-202ENST00000393928 2601 ntAPPRIS P2 TSL 1 (best) BASIC20.6■□□□□ 0.89
NXF1Q9UBU9 NECAB3-202ENST00000375238 1942 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
NXF1Q9UBU9 FAM117B-201ENST00000392238 5763 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
NXF1Q9UBU9 ECE1-205ENST00000436918 2328 ntTSL 2 BASIC20.6■□□□□ 0.89
NXF1Q9UBU9 SLC35E2-201ENST00000246421 1430 ntAPPRIS P3 TSL 1 (best) BASIC20.6■□□□□ 0.89
NXF1Q9UBU9 HTR1E-201ENST00000305344 2052 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
NXF1Q9UBU9 ASNS-206ENST00000437628 1638 ntTSL 2 BASIC20.6■□□□□ 0.89
NXF1Q9UBU9 ZSWIM8-220ENST00000604524 5465 ntTSL 5 BASIC20.6■□□□□ 0.89
NXF1Q9UBU9 AC008105.1-201ENST00000587534 2003 ntTSL 2 BASIC20.6■□□□□ 0.89
NXF1Q9UBU9 EPN3-216ENST00000537145 2223 ntTSL 5 BASIC20.59■□□□□ 0.89
NXF1Q9UBU9 NKX6-1-201ENST00000295886 2628 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
NXF1Q9UBU9 SDHA-201ENST00000264932 2390 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
NXF1Q9UBU9 PLA2G15-202ENST00000413021 1346 ntTSL 2 BASIC20.59■□□□□ 0.89
NXF1Q9UBU9 AC027031.2-201ENST00000521369 1318 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
NXF1Q9UBU9 LIMS2-204ENST00000409286 1678 ntTSL 2 BASIC20.59■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 18.5 ms