Protein–RNA interactions for Protein: Q9H270

VPS11, Vacuolar protein sorting-associated protein 11 homolog, humanhuman

Predictions only

Length 941 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11Q9H270 IKBKGP1-201ENST00000612193 1073 ntBASIC19.3■□□□□ 0.68
VPS11Q9H270 AC092437.1-201ENST00000624794 1048 ntBASIC19.3■□□□□ 0.68
VPS11Q9H270 TMEM79-203ENST00000405535 2201 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
VPS11Q9H270 TFDP2-202ENST00000467072 1853 ntAPPRIS P3 TSL 1 (best) BASIC19.3■□□□□ 0.68
VPS11Q9H270 AR-207ENST00000612010 3896 ntTSL 5 BASIC19.3■□□□□ 0.68
VPS11Q9H270 SYNDIG1L-201ENST00000331628 2607 ntAPPRIS P1 TSL 5 BASIC19.3■□□□□ 0.68
VPS11Q9H270 SLC38A10-201ENST00000288439 2708 ntAPPRIS P3 TSL 1 (best) BASIC19.3■□□□□ 0.68
VPS11Q9H270 KAZN-203ENST00000376030 6030 ntAPPRIS P1 TSL 5 BASIC19.3■□□□□ 0.68
VPS11Q9H270 NUP50-AS1-201ENST00000426282 2076 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
VPS11Q9H270 TLE4-205ENST00000376544 4871 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
VPS11Q9H270 PKN1-201ENST00000242783 3069 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
VPS11Q9H270 KIF1BP-204ENST00000626493 2337 ntTSL 5 BASIC19.29■□□□□ 0.68
VPS11Q9H270 ESPN-205ENST00000461727 1869 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
VPS11Q9H270 MSLN-207ENST00000566549 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
VPS11Q9H270 AC074212.1-201ENST00000559756 1402 ntTSL 3 BASIC19.29■□□□□ 0.68
VPS11Q9H270 RER1-204ENST00000378518 522 ntTSL 3 BASIC19.29■□□□□ 0.68
VPS11Q9H270 MIR663A-201ENST00000385250 93 ntBASIC19.29■□□□□ 0.68
VPS11Q9H270 MELTF-AS1-202ENST00000415244 951 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
VPS11Q9H270 GRPEL2-202ENST00000416916 1006 ntTSL 2 BASIC19.29■□□□□ 0.68
VPS11Q9H270 CDCA4P2-201ENST00000441182 718 ntBASIC19.29■□□□□ 0.68
VPS11Q9H270 NME6-213ENST00000451657 871 ntTSL 2 BASIC19.29■□□□□ 0.68
VPS11Q9H270 AC107464.1-203ENST00000468356 2120 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
VPS11Q9H270 C5orf38-206ENST00000505778 509 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
VPS11Q9H270 TPD52L1-207ENST00000527711 999 ntTSL 2 BASIC19.29■□□□□ 0.68
VPS11Q9H270 CAPNS1-205ENST00000588780 1035 ntAPPRIS ALT2 TSL 5 BASIC19.29■□□□□ 0.68
VPS11Q9H270 AC243773.2-201ENST00000616341 490 ntTSL 2 BASIC19.29■□□□□ 0.68
VPS11Q9H270 PTCRA-204ENST00000616441 1125 ntAPPRIS ALT2 TSL 2 BASIC19.29■□□□□ 0.68
VPS11Q9H270 AC006557.6-201ENST00000623071 864 ntBASIC19.29■□□□□ 0.68
VPS11Q9H270 STK10-201ENST00000176763 6060 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
VPS11Q9H270 OGFOD2-207ENST00000536150 1956 ntTSL 2 BASIC19.29■□□□□ 0.68
VPS11Q9H270 CARD9-202ENST00000371734 1814 ntTSL 5 BASIC19.29■□□□□ 0.68
VPS11Q9H270 MRGPRG-AS1-201ENST00000420873 1818 ntTSL 2 BASIC19.29■□□□□ 0.68
VPS11Q9H270 AC124283.5-201ENST00000624661 1809 ntBASIC19.29■□□□□ 0.68
VPS11Q9H270 CDK5R1-201ENST00000313401 4325 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
VPS11Q9H270 HSD11B1L-219ENST00000581893 1540 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
VPS11Q9H270 PPP2R2B-203ENST00000394411 2071 ntAPPRIS P1 TSL 2 BASIC19.29■□□□□ 0.68
VPS11Q9H270 NEUROD2-201ENST00000302584 2041 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
VPS11Q9H270 AP001351.1-201ENST00000501397 1865 ntTSL 2 BASIC19.28■□□□□ 0.68
VPS11Q9H270 PHC1-212ENST00000543824 4292 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
VPS11Q9H270 UCHL5-204ENST00000367451 1346 ntTSL 5 BASIC19.28■□□□□ 0.68
VPS11Q9H270 AC008060.1-201ENST00000401499 1551 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
VPS11Q9H270 ETS1-208ENST00000535549 4594 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
VPS11Q9H270 AP001626.1-201ENST00000424890 2854 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
VPS11Q9H270 ZNF385A-202ENST00000352268 2076 ntTSL 2 BASIC19.28■□□□□ 0.68
VPS11Q9H270 ZNF395-211ENST00000523202 2068 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
VPS11Q9H270 MMP9-201ENST00000372330 2336 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
VPS11Q9H270 VBP1-201ENST00000286428 1686 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
VPS11Q9H270 FOXI3-201ENST00000428390 2804 ntAPPRIS P1 TSL 3 BASIC19.28■□□□□ 0.68
VPS11Q9H270 CHRNA10-201ENST00000250699 1945 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
VPS11Q9H270 NAA20-202ENST00000334982 1260 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
VPS11Q9H270 GGT1-206ENST00000404223 952 ntTSL 2 BASIC19.28■□□□□ 0.68
VPS11Q9H270 CSF1-205ENST00000420111 1083 ntTSL 5 BASIC19.28■□□□□ 0.68
VPS11Q9H270 C17orf49-202ENST00000546495 996 ntAPPRIS ALT1 TSL 2 BASIC19.28■□□□□ 0.68
VPS11Q9H270 PLEKHJ1-205ENST00000587394 937 ntTSL 2 BASIC19.28■□□□□ 0.68
VPS11Q9H270 YIF1B-213ENST00000591755 1077 ntTSL 2 BASIC19.28■□□□□ 0.68
VPS11Q9H270 GGTLC2-204ENST00000613850 973 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
VPS11Q9H270 GGTLC2-205ENST00000618722 1047 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
VPS11Q9H270 ADGRA3-202ENST00000334304 4566 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
VPS11Q9H270 PRR5-201ENST00000006251 1767 ntTSL 2 BASIC19.28■□□□□ 0.68
VPS11Q9H270 RBM15B-201ENST00000563281 6641 ntAPPRIS P1 BASIC19.28■□□□□ 0.68
VPS11Q9H270 SUPT4H1-202ENST00000577396 1643 ntTSL 2 BASIC19.28■□□□□ 0.68
VPS11Q9H270 TLNRD1-201ENST00000267984 4845 ntAPPRIS P1 BASIC19.28■□□□□ 0.68
VPS11Q9H270 PGLYRP2-202ENST00000340880 2230 ntAPPRIS P2 TSL 1 (best) BASIC19.28■□□□□ 0.68
VPS11Q9H270 ZNF302-206ENST00000505242 2849 ntAPPRIS P3 TSL 1 (best) BASIC19.28■□□□□ 0.68
VPS11Q9H270 ANKMY1-209ENST00000405523 1827 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
VPS11Q9H270 SGCE-207ENST00000447873 1597 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
VPS11Q9H270 MZT1-201ENST00000377818 2299 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
VPS11Q9H270 ST6GALNAC4-201ENST00000335791 1691 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
VPS11Q9H270 CPT2-207ENST00000636867 2643 ntTSL 5 BASIC19.27■□□□□ 0.68
VPS11Q9H270 ENOPH1-201ENST00000273920 2025 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
VPS11Q9H270 AC087457.1-201ENST00000503496 2727 ntTSL 2 BASIC19.27■□□□□ 0.68
VPS11Q9H270 BICD1-207ENST00000551848 1962 ntBASIC19.27■□□□□ 0.68
VPS11Q9H270 LCE2A-201ENST00000368779 592 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
VPS11Q9H270 SLC22A15-201ENST00000369502 1230 ntTSL 2 BASIC19.27■□□□□ 0.68
VPS11Q9H270 AC026185.1-201ENST00000445748 174 ntBASIC19.27■□□□□ 0.68
VPS11Q9H270 LINC01962-201ENST00000513771 411 ntTSL 2 BASIC19.27■□□□□ 0.68
VPS11Q9H270 PSMG4-209ENST00000473000 4603 ntTSL 2 BASIC19.27■□□□□ 0.68
VPS11Q9H270 RAB4A-205ENST00000618010 2799 ntTSL 3 BASIC19.27■□□□□ 0.68
VPS11Q9H270 RBM7-201ENST00000375490 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC19.27■□□□□ 0.68
VPS11Q9H270 SASH1-201ENST00000367467 7711 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
VPS11Q9H270 TM7SF2-202ENST00000345348 1490 ntTSL 1 (best) BASIC19.27■□□□□ 0.67
VPS11Q9H270 R3HCC1-210ENST00000625275 1489 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.67
VPS11Q9H270 USP39-202ENST00000409025 1946 ntTSL 5 BASIC19.27■□□□□ 0.67
VPS11Q9H270 UBL4A-202ENST00000369660 2382 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
VPS11Q9H270 RRN3-205ENST00000563559 2128 ntTSL 5 BASIC19.27■□□□□ 0.67
VPS11Q9H270 SIM2-201ENST00000290399 4442 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
VPS11Q9H270 ASIC3-202ENST00000349064 1895 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
VPS11Q9H270 GTF2IP1-210ENST00000622829 3605 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
VPS11Q9H270 NLGN2-204ENST00000575301 4374 ntAPPRIS P1 TSL 5 BASIC19.26■□□□□ 0.67
VPS11Q9H270 BEGAIN-202ENST00000443071 2744 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
VPS11Q9H270 AC005332.8-201ENST00000622750 2735 ntBASIC19.26■□□□□ 0.67
VPS11Q9H270 TTC34-201ENST00000401095 8814 ntAPPRIS ALT2 TSL 5 BASIC19.26■□□□□ 0.67
VPS11Q9H270 WT1-211ENST00000639907 1545 ntAPPRIS ALT2 TSL 2 BASIC19.26■□□□□ 0.67
VPS11Q9H270 DACH1-202ENST00000613252 5233 ntAPPRIS P2 TSL 1 (best) BASIC19.26■□□□□ 0.67
VPS11Q9H270 SLC6A9-201ENST00000357730 2168 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
VPS11Q9H270 PDLIM4-201ENST00000253754 2282 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
VPS11Q9H270 SEMA3D-202ENST00000444867 1605 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
VPS11Q9H270 LGALS7B-201ENST00000314980 483 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
VPS11Q9H270 SULT1A1-202ENST00000350842 1282 ntTSL 3 BASIC19.26■□□□□ 0.67
VPS11Q9H270 RAB4A-201ENST00000366690 2966 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 33.1 ms