Protein–RNA interactions for Protein: Q96PU9

ODF3, Outer dense fiber protein 3, humanhuman

Predictions only

Length 254 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ODF3Q96PU9 SEMA3D-202ENST00000444867 1605 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
ODF3Q96PU9 FAM160A2-201ENST00000265978 3481 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
ODF3Q96PU9 AC073107.1-201ENST00000633579 1962 ntTSL 5 BASIC14.18□□□□□ -0.14
ODF3Q96PU9 CYHR1-202ENST00000403000 1477 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
ODF3Q96PU9 FER1L4-211ENST00000616283 1818 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
ODF3Q96PU9 ACSS3-201ENST00000261206 2666 ntAPPRIS ALT1 TSL 1 (best) BASIC14.18□□□□□ -0.14
ODF3Q96PU9 STX17-212ENST00000534052 2424 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
ODF3Q96PU9 GCSH-201ENST00000315467 1597 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
ODF3Q96PU9 PKD2-201ENST00000237596 5056 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
ODF3Q96PU9 DDX31-206ENST00000480876 1333 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
ODF3Q96PU9 CHRNA10-201ENST00000250699 1945 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
ODF3Q96PU9 MON1A-202ENST00000417270 2527 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
ODF3Q96PU9 RELB-201ENST00000221452 2294 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
ODF3Q96PU9 DENND1A-203ENST00000373624 5010 ntAPPRIS P4 TSL 5 BASIC14.17□□□□□ -0.14
ODF3Q96PU9 PRR5-ARHGAP8-201ENST00000352766 2043 ntAPPRIS P1 TSL 2 BASIC14.17□□□□□ -0.14
ODF3Q96PU9 MMP28-204ENST00000615136 2033 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
ODF3Q96PU9 CWH43-201ENST00000226432 2472 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
ODF3Q96PU9 UTP18-201ENST00000225298 1894 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
ODF3Q96PU9 ESPN-205ENST00000461727 1869 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
ODF3Q96PU9 PARL-201ENST00000311101 1240 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
ODF3Q96PU9 DUSP23-201ENST00000368107 756 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
ODF3Q96PU9 RTL8A-201ENST00000370775 1244 ntAPPRIS P1 BASIC14.17□□□□□ -0.14
ODF3Q96PU9 DYNLT3-203ENST00000432389 719 ntTSL 5 BASIC14.17□□□□□ -0.14
ODF3Q96PU9 AL359747.1-201ENST00000442370 536 ntTSL 2 BASIC14.17□□□□□ -0.14
ODF3Q96PU9 AC026366.1-201ENST00000488803 879 ntBASIC14.17□□□□□ -0.14
ODF3Q96PU9 FAM163B-202ENST00000496132 811 ntAPPRIS P1 TSL 3 BASIC14.17□□□□□ -0.14
ODF3Q96PU9 B3GAT3-205ENST00000534026 1120 ntTSL 2 BASIC14.17□□□□□ -0.14
ODF3Q96PU9 MIXL1-202ENST00000542034 839 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
ODF3Q96PU9 C14orf28-204ENST00000557112 1097 ntTSL 5 BASIC14.17□□□□□ -0.14
ODF3Q96PU9 GNAO1-211ENST00000570235 568 ntTSL 2 BASIC14.17□□□□□ -0.14
ODF3Q96PU9 AC008403.3-201ENST00000598924 454 ntBASIC14.17□□□□□ -0.14
ODF3Q96PU9 ZNF264-205ENST00000599653 705 ntTSL 2 BASIC14.17□□□□□ -0.14
ODF3Q96PU9 AC069544.1-201ENST00000609399 999 ntBASIC14.17□□□□□ -0.14
ODF3Q96PU9 MAGIX-206ENST00000615626 1057 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
ODF3Q96PU9 C20orf204-205ENST00000636176 961 ntAPPRIS P5 TSL 5 BASIC14.17□□□□□ -0.14
ODF3Q96PU9 P3H4-201ENST00000355468 2791 ntAPPRIS P2 TSL 2 BASIC14.17□□□□□ -0.14
ODF3Q96PU9 AC004408.2-201ENST00000623613 2777 ntBASIC14.17□□□□□ -0.14
ODF3Q96PU9 IDH3G-202ENST00000370092 1712 ntTSL 5 BASIC14.17□□□□□ -0.14
ODF3Q96PU9 ADAM33-203ENST00000379861 3674 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
ODF3Q96PU9 CNTNAP3B-203ENST00000377561 5379 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
ODF3Q96PU9 COL4A3BP-201ENST00000261415 2262 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
ODF3Q96PU9 ZAR1L-202ENST00000533490 1564 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
ODF3Q96PU9 RBFOX1-204ENST00000422070 1684 ntTSL 2 BASIC14.17□□□□□ -0.14
ODF3Q96PU9 FOXN3-214ENST00000557258 2692 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
ODF3Q96PU9 TRPV3-209ENST00000576742 2766 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
ODF3Q96PU9 Z98044.1-201ENST00000632503 1764 ntBASIC14.17□□□□□ -0.14
ODF3Q96PU9 ETV4-201ENST00000319349 2429 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
ODF3Q96PU9 IL10RB-201ENST00000290200 1963 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
ODF3Q96PU9 PPM1B-201ENST00000282412 2606 ntAPPRIS P4 TSL 1 (best) BASIC14.16□□□□□ -0.14
ODF3Q96PU9 ZNF326-202ENST00000361911 1538 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
ODF3Q96PU9 CIRBP-215ENST00000588030 1509 ntAPPRIS P3 TSL 5 BASIC14.16□□□□□ -0.14
ODF3Q96PU9 MOXD1-203ENST00000392401 2191 ntTSL 4 BASIC14.16□□□□□ -0.14
ODF3Q96PU9 SLMAP-201ENST00000295951 5433 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
ODF3Q96PU9 CPZ-202ENST00000360986 2267 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
ODF3Q96PU9 TMEM8A-204ENST00000431232 3691 ntAPPRIS P2 TSL 1 (best) BASIC14.16□□□□□ -0.14
ODF3Q96PU9 OTOP3-201ENST00000328801 2363 ntAPPRIS P1 TSL 2 BASIC14.16□□□□□ -0.14
ODF3Q96PU9 TNFRSF8-202ENST00000413146 2363 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
ODF3Q96PU9 LSM4-203ENST00000593829 1908 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
ODF3Q96PU9 WDR74-202ENST00000311713 1153 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
ODF3Q96PU9 AC005056.1-201ENST00000435932 532 ntTSL 4 BASIC14.16□□□□□ -0.14
ODF3Q96PU9 AC073316.3-201ENST00000437354 982 ntTSL 3 BASIC14.16□□□□□ -0.14
ODF3Q96PU9 HOXB-AS3-204ENST00000466037 522 ntTSL 3 BASIC14.16□□□□□ -0.14
ODF3Q96PU9 GLRB-205ENST00000512619 728 ntTSL 3 BASIC14.16□□□□□ -0.14
ODF3Q96PU9 RNASEK-202ENST00000548577 810 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
ODF3Q96PU9 MTDHP1-201ENST00000605323 784 ntBASIC14.16□□□□□ -0.14
ODF3Q96PU9 HLA-A-209ENST00000638375 975 ntBASIC14.16□□□□□ -0.14
ODF3Q96PU9 ARHGEF18-202ENST00000359920 5733 ntAPPRIS ALT2 TSL 2 BASIC14.16□□□□□ -0.14
ODF3Q96PU9 C2orf81-201ENST00000290390 2227 ntAPPRIS P5 TSL 5 BASIC14.16□□□□□ -0.14
ODF3Q96PU9 EPOR-201ENST00000222139 2411 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
ODF3Q96PU9 IL6R-208ENST00000622330 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
ODF3Q96PU9 RSAD1-201ENST00000258955 2528 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
ODF3Q96PU9 PIK3R1-201ENST00000320694 2625 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
ODF3Q96PU9 NPIPA8-201ENST00000525596 1565 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
ODF3Q96PU9 KSR1-205ENST00000509603 2731 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
ODF3Q96PU9 CBSL-210ENST00000624934 1992 ntTSL 5 BASIC14.16□□□□□ -0.14
ODF3Q96PU9 HBEGF-201ENST00000230990 2386 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
ODF3Q96PU9 EDN3-204ENST00000371028 2397 ntAPPRIS P4 TSL 5 BASIC14.16□□□□□ -0.14
ODF3Q96PU9 PTRH1-204ENST00000419060 2692 ntAPPRIS P1 TSL 2 BASIC14.16□□□□□ -0.14
ODF3Q96PU9 RNASEH2C-203ENST00000528220 1337 ntTSL 2 BASIC14.15□□□□□ -0.14
ODF3Q96PU9 GABRD-205ENST00000638771 1707 ntAPPRIS ALT2 TSL 3 BASIC14.15□□□□□ -0.14
ODF3Q96PU9 PGAM1-201ENST00000334828 1830 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
ODF3Q96PU9 PODNL1-203ENST00000538371 1826 ntAPPRIS ALT2 TSL 2 BASIC14.15□□□□□ -0.14
ODF3Q96PU9 RASSF1-210ENST00000616212 1842 ntTSL 2 BASIC14.15□□□□□ -0.14
ODF3Q96PU9 PCBP3-206ENST00000400314 2202 ntAPPRIS P2 TSL 5 BASIC14.15□□□□□ -0.14
ODF3Q96PU9 PPP1R3F-202ENST00000376188 2443 ntTSL 2 BASIC14.15□□□□□ -0.14
ODF3Q96PU9 VAV1-201ENST00000304076 2825 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
ODF3Q96PU9 AC020922.1-201ENST00000591954 3058 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
ODF3Q96PU9 ZNF213-202ENST00000416391 2996 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
ODF3Q96PU9 HCCS-201ENST00000321143 2277 ntAPPRIS P1 TSL 2 BASIC14.15□□□□□ -0.14
ODF3Q96PU9 AC138356.1-201ENST00000330539 2086 ntTSL 2 BASIC14.15□□□□□ -0.14
ODF3Q96PU9 ENOPH1-203ENST00000509635 1874 ntTSL 3 BASIC14.15□□□□□ -0.14
ODF3Q96PU9 TMEM230-206ENST00000379283 1660 ntAPPRIS P1 TSL 3 BASIC14.15□□□□□ -0.14
ODF3Q96PU9 GSEC-202ENST00000629441 1572 ntTSL 2 BASIC14.15□□□□□ -0.14
ODF3Q96PU9 TSC22D4-202ENST00000393991 1469 ntTSL 2 BASIC14.15□□□□□ -0.14
ODF3Q96PU9 SOX15-201ENST00000250055 1396 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
ODF3Q96PU9 SPSB1-203ENST00000377399 1007 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
ODF3Q96PU9 HLA-L-209ENST00000420110 1011 ntBASIC14.15□□□□□ -0.14
ODF3Q96PU9 MAGI2-AS3-209ENST00000448195 774 ntTSL 3 BASIC14.15□□□□□ -0.14
ODF3Q96PU9 F2R-202ENST00000505600 442 ntTSL 2 BASIC14.15□□□□□ -0.14
ODF3Q96PU9 CYB561-214ENST00000582034 1193 ntTSL 2 BASIC14.15□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 45.5 ms