Protein–RNA interactions for Protein: Q96M91

CFAP53, Cilia- and flagella-associated protein 53, humanhuman

Predictions only

Length 514 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CFAP53Q96M91 DSCC1-201ENST00000313655 2314 ntAPPRIS P1 TSL 1 (best) BASIC25.68■■□□□ 1.7
CFAP53Q96M91 FOXD4-201ENST00000382500 1974 ntAPPRIS P1 BASIC25.67■■□□□ 1.7
CFAP53Q96M91 RNF170-205ENST00000526349 1338 ntTSL 1 (best) BASIC25.67■■□□□ 1.7
CFAP53Q96M91 CYP2D8P-201ENST00000433633 1490 ntBASIC25.67■■□□□ 1.7
CFAP53Q96M91 ZFC3H1-206ENST00000548100 1771 ntTSL 1 (best) BASIC25.67■■□□□ 1.7
CFAP53Q96M91 ZNF843-203ENST00000618063 1765 ntAPPRIS P2 TSL 1 (best) BASIC25.67■■□□□ 1.7
CFAP53Q96M91 TRMT6-202ENST00000453074 2239 ntTSL 2 BASIC25.67■■□□□ 1.7
CFAP53Q96M91 SUSD1-202ENST00000374263 2973 ntAPPRIS ALT2 TSL 2 BASIC25.67■■□□□ 1.7
CFAP53Q96M91 TINAGL1-201ENST00000271064 2187 ntAPPRIS P3 TSL 1 (best) BASIC25.67■■□□□ 1.7
CFAP53Q96M91 CYP2D6-201ENST00000359033 1433 ntTSL 1 (best) BASIC25.67■■□□□ 1.7
CFAP53Q96M91 FAM86C2P-201ENST00000525180 435 ntTSL 4 BASIC25.67■■□□□ 1.7
CFAP53Q96M91 CCDC28A-203ENST00000617445 1240 ntAPPRIS P1 TSL 1 (best) BASIC25.67■■□□□ 1.7
CFAP53Q96M91 ULK1-201ENST00000321867 5310 ntAPPRIS P1 TSL 1 (best) BASIC25.67■■□□□ 1.7
CFAP53Q96M91 BIRC2-206ENST00000530675 1927 ntTSL 2 BASIC25.67■■□□□ 1.7
CFAP53Q96M91 AC004890.2-202ENST00000463462 1494 ntTSL 1 (best) BASIC25.66■■□□□ 1.7
CFAP53Q96M91 PLD4-204ENST00000540372 2007 ntAPPRIS ALT2 TSL 2 BASIC25.66■■□□□ 1.7
CFAP53Q96M91 EARS2-210ENST00000564501 2027 ntTSL 5 BASIC25.66■■□□□ 1.7
CFAP53Q96M91 GOSR2-210ENST00000576910 1891 ntAPPRIS ALT1 TSL 5 BASIC25.66■■□□□ 1.7
CFAP53Q96M91 ATOH8-201ENST00000306279 2438 ntAPPRIS P1 TSL 1 (best) BASIC25.66■■□□□ 1.7
CFAP53Q96M91 PIGQ-209ENST00000470411 2112 ntTSL 1 (best) BASIC25.66■■□□□ 1.7
CFAP53Q96M91 AKIP1-207ENST00000529876 1421 ntTSL 2 BASIC25.66■■□□□ 1.7
CFAP53Q96M91 HPF1-201ENST00000393381 1230 ntAPPRIS P1 TSL 1 (best) BASIC25.66■■□□□ 1.7
CFAP53Q96M91 TRPT1-203ENST00000394547 865 ntTSL 1 (best) BASIC25.66■■□□□ 1.7
CFAP53Q96M91 MUC1-211ENST00000438413 927 ntTSL 1 (best) BASIC25.66■■□□□ 1.7
CFAP53Q96M91 AL359747.1-201ENST00000442370 536 ntTSL 2 BASIC25.66■■□□□ 1.7
CFAP53Q96M91 FBXO32-202ENST00000443022 1227 ntTSL 1 (best) BASIC25.66■■□□□ 1.7
CFAP53Q96M91 AC108025.1-201ENST00000453678 1058 ntTSL 5 BASIC25.66■■□□□ 1.7
CFAP53Q96M91 TMEM185A-204ENST00000507237 903 ntTSL 2 BASIC25.66■■□□□ 1.7
CFAP53Q96M91 IKBKB-210ENST00000518983 447 ntTSL 2 BASIC25.66■■□□□ 1.7
CFAP53Q96M91 NCAM1-AS1-201ENST00000526229 1081 ntTSL 2 BASIC25.66■■□□□ 1.7
CFAP53Q96M91 CBLN1-202ENST00000536749 718 ntAPPRIS P1 TSL 5 BASIC25.66■■□□□ 1.7
CFAP53Q96M91 LINC01023-201ENST00000606054 436 ntBASIC25.66■■□□□ 1.7
CFAP53Q96M91 AC010947.1-201ENST00000623454 693 ntBASIC25.66■■□□□ 1.7
CFAP53Q96M91 AC026412.3-201ENST00000605200 1661 ntTSL 5 BASIC25.66■■□□□ 1.7
CFAP53Q96M91 TPCN2-209ENST00000637504 2736 ntTSL 5 BASIC25.66■■□□□ 1.7
CFAP53Q96M91 RBPMS-210ENST00000520191 1613 ntTSL 1 (best) BASIC25.66■■□□□ 1.7
CFAP53Q96M91 ARHGAP11A-205ENST00000563864 2279 ntTSL 5 BASIC25.66■■□□□ 1.7
CFAP53Q96M91 FAM214B-203ENST00000378561 5771 ntAPPRIS P1 TSL 1 (best) BASIC25.66■■□□□ 1.7
CFAP53Q96M91 TBC1D9-201ENST00000442267 5306 ntAPPRIS P1 TSL 1 (best) BASIC25.66■■□□□ 1.7
CFAP53Q96M91 NAPA-210ENST00000595227 1460 ntTSL 3 BASIC25.66■■□□□ 1.7
CFAP53Q96M91 KTI12-201ENST00000371614 1714 ntAPPRIS P1 BASIC25.66■■□□□ 1.7
CFAP53Q96M91 AC005906.2-203ENST00000640962 2091 ntTSL 5 BASIC25.65■■□□□ 1.7
CFAP53Q96M91 BCAM-201ENST00000270233 2402 ntAPPRIS P1 TSL 1 (best) BASIC25.65■■□□□ 1.7
CFAP53Q96M91 NECAB3-202ENST00000375238 1942 ntAPPRIS P1 TSL 1 (best) BASIC25.65■■□□□ 1.7
CFAP53Q96M91 CDH5-204ENST00000563425 1932 ntTSL 5 BASIC25.65■■□□□ 1.7
CFAP53Q96M91 METRNL-203ENST00000571814 1900 ntTSL 1 (best) BASIC25.65■■□□□ 1.7
CFAP53Q96M91 SOX2-201ENST00000325404 2513 ntAPPRIS P1 BASIC25.65■■□□□ 1.7
CFAP53Q96M91 PAQR4-203ENST00000572687 2251 ntTSL 2 BASIC25.65■■□□□ 1.7
CFAP53Q96M91 FAM182B-202ENST00000376404 456 ntAPPRIS ALT2 BASIC25.65■■□□□ 1.7
CFAP53Q96M91 AL954642.1-201ENST00000428088 538 ntTSL 3 BASIC25.65■■□□□ 1.7
CFAP53Q96M91 THOP1-202ENST00000395212 1877 ntTSL 2 BASIC25.65■■□□□ 1.7
CFAP53Q96M91 ACD-201ENST00000219251 2052 ntAPPRIS P3 TSL 2 BASIC25.65■■□□□ 1.7
CFAP53Q96M91 ISOC2-203ENST00000438389 1566 ntTSL 2 BASIC25.65■■□□□ 1.7
CFAP53Q96M91 TM9SF1-203ENST00000524835 1938 ntTSL 2 BASIC25.65■■□□□ 1.7
CFAP53Q96M91 AC005906.2-207ENST00000639005 1580 ntTSL 5 BASIC25.65■■□□□ 1.7
CFAP53Q96M91 PTGER2-201ENST00000245457 2383 ntAPPRIS P1 TSL 1 (best) BASIC25.64■■□□□ 1.7
CFAP53Q96M91 AC124066.1-201ENST00000581122 1660 ntTSL 5 BASIC25.64■■□□□ 1.7
CFAP53Q96M91 GAL3ST1-206ENST00000406955 1635 ntAPPRIS P1 TSL 1 (best) BASIC25.64■■□□□ 1.7
CFAP53Q96M91 RETREG2-203ENST00000430297 4618 ntAPPRIS P1 TSL 1 (best) BASIC25.64■■□□□ 1.7
CFAP53Q96M91 PTMS-201ENST00000309083 1139 ntAPPRIS P1 TSL 1 (best) BASIC25.64■■□□□ 1.7
CFAP53Q96M91 ANK1-206ENST00000348036 622 ntTSL 1 (best) BASIC25.64■■□□□ 1.7
CFAP53Q96M91 MLF2-210ENST00000542154 838 ntAPPRIS P1 TSL 5 BASIC25.64■■□□□ 1.7
CFAP53Q96M91 AC100793.2-201ENST00000593139 542 ntTSL 5 BASIC25.64■■□□□ 1.7
CFAP53Q96M91 AC008763.3-201ENST00000597959 777 ntAPPRIS P1 TSL 4 BASIC25.64■■□□□ 1.7
CFAP53Q96M91 DUSP1-201ENST00000239223 2019 ntAPPRIS P1 TSL 1 (best) BASIC25.64■■□□□ 1.69
CFAP53Q96M91 CTBP2-205ENST00000411419 2036 ntAPPRIS P1 TSL 1 (best) BASIC25.64■■□□□ 1.69
CFAP53Q96M91 CNTNAP3B-202ENST00000341990 2666 ntTSL 2 BASIC25.64■■□□□ 1.69
CFAP53Q96M91 OTOP2-201ENST00000331427 2147 ntAPPRIS P1 TSL 5 BASIC25.64■■□□□ 1.69
CFAP53Q96M91 LSM11-201ENST00000286307 6584 ntAPPRIS P1 TSL 1 (best) BASIC25.64■■□□□ 1.69
CFAP53Q96M91 ACAA1-209ENST00000450296 1570 ntTSL 5 BASIC25.64■■□□□ 1.69
CFAP53Q96M91 RASGRP2-211ENST00000394432 2304 ntAPPRIS P2 TSL 1 (best) BASIC25.64■■□□□ 1.69
CFAP53Q96M91 OGG1-201ENST00000302003 1655 ntAPPRIS P4 TSL 1 (best) BASIC25.64■■□□□ 1.69
CFAP53Q96M91 SELENOF-207ENST00000611507 1785 ntTSL 5 BASIC25.64■■□□□ 1.69
CFAP53Q96M91 SHISA7-201ENST00000376325 6033 ntAPPRIS P2 TSL 2 BASIC25.64■■□□□ 1.69
CFAP53Q96M91 AC093484.2-201ENST00000580996 2166 ntBASIC25.63■■□□□ 1.69
CFAP53Q96M91 RABEPK-202ENST00000373538 1504 ntAPPRIS P1 TSL 1 (best) BASIC25.63■■□□□ 1.69
CFAP53Q96M91 MED25-201ENST00000312865 2332 ntAPPRIS P1 TSL 1 (best) BASIC25.63■■□□□ 1.69
CFAP53Q96M91 SNAPIN-201ENST00000368685 1030 ntAPPRIS P1 TSL 1 (best) BASIC25.63■■□□□ 1.69
CFAP53Q96M91 AL139246.2-201ENST00000456687 1297 ntTSL 5 BASIC25.63■■□□□ 1.69
CFAP53Q96M91 AC098864.1-204ENST00000513752 805 ntTSL 4 BASIC25.63■■□□□ 1.69
CFAP53Q96M91 AC097493.4-201ENST00000641197 219 ntBASIC25.63■■□□□ 1.69
CFAP53Q96M91 SERPINH1-212ENST00000530284 1358 ntTSL 1 (best) BASIC25.63■■□□□ 1.69
CFAP53Q96M91 ZIC4-209ENST00000473123 1481 ntAPPRIS P1 TSL 2 BASIC25.63■■□□□ 1.69
CFAP53Q96M91 NCK2-205ENST00000451463 1795 ntTSL 2 BASIC25.63■■□□□ 1.69
CFAP53Q96M91 PCID2-202ENST00000337344 1898 ntAPPRIS P1 TSL 2 BASIC25.63■■□□□ 1.69
CFAP53Q96M91 PCCB-208ENST00000468777 1877 ntAPPRIS ALT2 TSL 3 BASIC25.63■■□□□ 1.69
CFAP53Q96M91 SEC11C-202ENST00000509791 2054 ntTSL 1 (best) BASIC25.63■■□□□ 1.69
CFAP53Q96M91 FUT4-201ENST00000358752 6059 ntAPPRIS P1 BASIC25.63■■□□□ 1.69
CFAP53Q96M91 SPTBN4-207ENST00000595535 6105 ntTSL 5 BASIC25.63■■□□□ 1.69
CFAP53Q96M91 SLC25A3-201ENST00000188376 1909 ntAPPRIS ALT1 TSL 1 (best) BASIC25.63■■□□□ 1.69
CFAP53Q96M91 KRT17-205ENST00000540235 1438 ntTSL 5 BASIC25.63■■□□□ 1.69
CFAP53Q96M91 COL15A1-205ENST00000610452 5422 ntAPPRIS ALT2 TSL 5 BASIC25.62■■□□□ 1.69
CFAP53Q96M91 KLRG2-201ENST00000340940 2197 ntAPPRIS P1 TSL 1 (best) BASIC25.62■■□□□ 1.69
CFAP53Q96M91 MYEOV-202ENST00000441339 1996 ntAPPRIS P3 TSL 2 BASIC25.62■■□□□ 1.69
CFAP53Q96M91 TSNAXIP1-202ENST00000415766 2338 ntAPPRIS ALT2 TSL 2 BASIC25.62■■□□□ 1.69
CFAP53Q96M91 LINC01568-207ENST00000641790 1380 ntBASIC25.62■■□□□ 1.69
CFAP53Q96M91 TSPY14P-201ENST00000303979 915 ntBASIC25.62■■□□□ 1.69
CFAP53Q96M91 SLC34A3-201ENST00000361134 2124 ntAPPRIS P1 TSL 2 BASIC25.62■■□□□ 1.69
CFAP53Q96M91 ZCCHC24-201ENST00000372333 906 ntTSL 2 BASIC25.62■■□□□ 1.69
CFAP53Q96M91 ECEL1P3-201ENST00000427961 737 ntBASIC25.62■■□□□ 1.69
Retrieved 100 of 98,524 protein–RNA pairs in 23.7 ms