Protein–RNA interactions for Protein: Q96KN3

PKNOX2, Homeobox protein PKNOX2, humanhuman

Predictions only

Length 472 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PKNOX2Q96KN3 BRPF1-203ENST00000424362 4712 ntAPPRIS ALT1 TSL 1 (best) BASIC20.7■□□□□ 0.91
PKNOX2Q96KN3 TH-206ENST00000381178 1910 ntTSL 1 (best) BASIC20.7■□□□□ 0.91
PKNOX2Q96KN3 SYBU-205ENST00000422135 3226 ntAPPRIS ALT2 TSL 5 BASIC20.7■□□□□ 0.9
PKNOX2Q96KN3 AC009237.3-201ENST00000393279 1427 ntBASIC20.7■□□□□ 0.9
PKNOX2Q96KN3 PID1-202ENST00000392054 2745 ntTSL 2 BASIC20.7■□□□□ 0.9
PKNOX2Q96KN3 ZNF286A-204ENST00000464847 5616 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
PKNOX2Q96KN3 C17orf62-204ENST00000437807 2242 ntAPPRIS P1 TSL 2 BASIC20.7■□□□□ 0.9
PKNOX2Q96KN3 NUDT16P1-202ENST00000499077 2208 ntTSL 2 BASIC20.7■□□□□ 0.9
PKNOX2Q96KN3 HCG11-201ENST00000411553 5696 ntBASIC20.7■□□□□ 0.9
PKNOX2Q96KN3 IL11RA-201ENST00000318041 1728 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
PKNOX2Q96KN3 OGG1-205ENST00000344629 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
PKNOX2Q96KN3 GABBR1-202ENST00000376977 1739 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
PKNOX2Q96KN3 AC024909.3-201ENST00000611513 2257 ntBASIC20.7■□□□□ 0.9
PKNOX2Q96KN3 PNLIPRP2-204ENST00000591655 1456 ntAPPRIS ALT1 TSL 5 BASIC20.7■□□□□ 0.9
PKNOX2Q96KN3 POLI-202ENST00000406285 2030 ntTSL 2 BASIC20.7■□□□□ 0.9
PKNOX2Q96KN3 PACRGL-227ENST00000513459 1773 ntTSL 5 BASIC20.7■□□□□ 0.9
PKNOX2Q96KN3 ANXA6-211ENST00000521512 1793 ntTSL 5 BASIC20.7■□□□□ 0.9
PKNOX2Q96KN3 ADIRF-AS1-201ENST00000418273 2627 ntTSL 3 BASIC20.7■□□□□ 0.9
PKNOX2Q96KN3 DDX59-206ENST00000447706 2900 ntTSL 2 BASIC20.7■□□□□ 0.9
PKNOX2Q96KN3 SARDH-205ENST00000422262 2367 ntTSL 5 BASIC20.7■□□□□ 0.9
PKNOX2Q96KN3 INPP5K-204ENST00000421807 2988 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
PKNOX2Q96KN3 SRD5A1P1-201ENST00000442297 786 ntBASIC20.7■□□□□ 0.9
PKNOX2Q96KN3 LYSMD2-202ENST00000454181 1228 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
PKNOX2Q96KN3 FBXL12-203ENST00000586073 582 ntTSL 2 BASIC20.7■□□□□ 0.9
PKNOX2Q96KN3 CFD-202ENST00000592860 809 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
PKNOX2Q96KN3 PTPRU-202ENST00000373779 5579 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
PKNOX2Q96KN3 POC1B-202ENST00000393179 3096 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
PKNOX2Q96KN3 AL731569.1-201ENST00000428940 3058 ntTSL 2 BASIC20.7■□□□□ 0.9
PKNOX2Q96KN3 AVPR2-203ENST00000370049 1307 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
PKNOX2Q96KN3 ENPP1-201ENST00000360971 7442 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
PKNOX2Q96KN3 MIRLET7BHG-203ENST00000435439 2264 ntTSL 2 BASIC20.7■□□□□ 0.9
PKNOX2Q96KN3 CHRDL2-210ENST00000622063 1691 ntTSL 5 BASIC20.7■□□□□ 0.9
PKNOX2Q96KN3 MMP28-204ENST00000615136 2033 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
PKNOX2Q96KN3 UNC5D-202ENST00000404895 3252 ntAPPRIS P3 TSL 1 (best) BASIC20.7■□□□□ 0.9
PKNOX2Q96KN3 SGPP1-201ENST00000247225 3312 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
PKNOX2Q96KN3 FAM120AOS-201ENST00000375412 2771 ntAPPRIS P3 TSL 1 (best) BASIC20.69■□□□□ 0.9
PKNOX2Q96KN3 PACS2-202ENST00000430725 2944 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
PKNOX2Q96KN3 SNAP91-204ENST00000369694 4449 ntAPPRIS P2 TSL 5 BASIC20.69■□□□□ 0.9
PKNOX2Q96KN3 VASP-201ENST00000245932 2305 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
PKNOX2Q96KN3 SPATC1L-201ENST00000291672 2303 ntAPPRIS P1 TSL 2 BASIC20.69■□□□□ 0.9
PKNOX2Q96KN3 DPP10-AS1-201ENST00000432658 730 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
PKNOX2Q96KN3 SMARCA5-AS1-201ENST00000500800 945 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
PKNOX2Q96KN3 AC061979.1-201ENST00000532061 434 ntTSL 5 BASIC20.69■□□□□ 0.9
PKNOX2Q96KN3 AC007448.3-201ENST00000585193 689 ntTSL 2 BASIC20.69■□□□□ 0.9
PKNOX2Q96KN3 PARVG-205ENST00000422871 3462 ntAPPRIS P1 TSL 5 BASIC20.69■□□□□ 0.9
PKNOX2Q96KN3 ARHGAP22-201ENST00000249601 2751 ntAPPRIS P3 TSL 1 (best) BASIC20.69■□□□□ 0.9
PKNOX2Q96KN3 AL354813.1-201ENST00000526566 2437 ntTSL 5 BASIC20.69■□□□□ 0.9
PKNOX2Q96KN3 FAR2P2-204ENST00000424873 2070 ntTSL 2 BASIC20.69■□□□□ 0.9
PKNOX2Q96KN3 HNRNPUL2-BSCL2-201ENST00000403734 4001 ntAPPRIS P1 TSL 2 BASIC20.69■□□□□ 0.9
PKNOX2Q96KN3 NF2-209ENST00000403999 2999 ntAPPRIS ALT1 TSL 1 (best) BASIC20.69■□□□□ 0.9
PKNOX2Q96KN3 AC005224.2-201ENST00000571192 1885 ntTSL 2 BASIC20.69■□□□□ 0.9
PKNOX2Q96KN3 PLBD2-201ENST00000280800 4800 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
PKNOX2Q96KN3 RANBP10-201ENST00000317506 5341 ntAPPRIS P2 TSL 1 (best) BASIC20.68■□□□□ 0.9
PKNOX2Q96KN3 RANBP10-209ENST00000630626 5305 ntAPPRIS ALT2 TSL 5 BASIC20.68■□□□□ 0.9
PKNOX2Q96KN3 PIAS3-201ENST00000369298 2761 ntTSL 5 BASIC20.68■□□□□ 0.9
PKNOX2Q96KN3 NSDHL-201ENST00000370274 1929 ntAPPRIS P2 TSL 1 (best) BASIC20.68■□□□□ 0.9
PKNOX2Q96KN3 TADA3-201ENST00000301964 2355 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
PKNOX2Q96KN3 ARHGAP22-203ENST00000374172 2380 ntTSL 2 BASIC20.68■□□□□ 0.9
PKNOX2Q96KN3 EVI5L-202ENST00000538904 2418 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
PKNOX2Q96KN3 PAPD5-203ENST00000561678 2916 ntTSL 5 BASIC20.68■□□□□ 0.9
PKNOX2Q96KN3 IFT140-201ENST00000361339 2987 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
PKNOX2Q96KN3 GPC2-201ENST00000292377 2532 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
PKNOX2Q96KN3 KIRREL2-205ENST00000592409 2563 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
PKNOX2Q96KN3 AATF-208ENST00000619387 2141 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
PKNOX2Q96KN3 MICALL2-201ENST00000297508 3121 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
PKNOX2Q96KN3 AC008741.2-201ENST00000612792 3115 ntBASIC20.68■□□□□ 0.9
PKNOX2Q96KN3 PTP4A1-201ENST00000370651 5088 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
PKNOX2Q96KN3 AXL-202ENST00000359092 3206 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
PKNOX2Q96KN3 ITGA8-201ENST00000378076 6755 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
PKNOX2Q96KN3 SLC47A1P1-202ENST00000449666 945 ntBASIC20.68■□□□□ 0.9
PKNOX2Q96KN3 QDPR-206ENST00000508623 601 ntTSL 3 BASIC20.68■□□□□ 0.9
PKNOX2Q96KN3 RNF225-201ENST00000601382 990 ntAPPRIS P1 BASIC20.68■□□□□ 0.9
PKNOX2Q96KN3 FBXO33-201ENST00000298097 3853 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
PKNOX2Q96KN3 USP7-201ENST00000344836 5412 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
PKNOX2Q96KN3 UMOD-205ENST00000570689 2315 ntAPPRIS P3 TSL 5 BASIC20.68■□□□□ 0.9
PKNOX2Q96KN3 PPP2R2C-209ENST00000515571 1832 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
PKNOX2Q96KN3 CORO6-202ENST00000388767 2397 ntAPPRIS P2 TSL 2 BASIC20.68■□□□□ 0.9
PKNOX2Q96KN3 UBALD1-208ENST00000591401 1305 ntTSL 5 BASIC20.68■□□□□ 0.9
PKNOX2Q96KN3 SPECC1-203ENST00000395525 2536 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
PKNOX2Q96KN3 HTATIP2-201ENST00000419348 1477 ntTSL 2 BASIC20.68■□□□□ 0.9
PKNOX2Q96KN3 LRRN4-201ENST00000378858 2692 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
PKNOX2Q96KN3 CDK18-217ENST00000506784 2143 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
PKNOX2Q96KN3 C19orf54-201ENST00000378313 2753 ntAPPRIS P1 TSL 2 BASIC20.68■□□□□ 0.9
PKNOX2Q96KN3 SYBU-230ENST00000532779 2765 ntAPPRIS ALT2 TSL 2 BASIC20.68■□□□□ 0.9
PKNOX2Q96KN3 COL18A1-204ENST00000400337 5436 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
PKNOX2Q96KN3 TYMP-202ENST00000395678 1614 ntAPPRIS P3 TSL 1 (best) BASIC20.67■□□□□ 0.9
PKNOX2Q96KN3 FBXW8-201ENST00000309909 2343 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
PKNOX2Q96KN3 SPRTN-201ENST00000008440 1667 ntTSL 2 BASIC20.67■□□□□ 0.9
PKNOX2Q96KN3 KCNMA1-278ENST00000640141 5705 ntAPPRIS ALT2 TSL 5 BASIC20.67■□□□□ 0.9
PKNOX2Q96KN3 RALGDS-205ENST00000393160 3801 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
PKNOX2Q96KN3 IP6K1-204ENST00000468463 1815 ntTSL 5 BASIC20.67■□□□□ 0.9
PKNOX2Q96KN3 GNAI1-201ENST00000351004 3347 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
PKNOX2Q96KN3 STX6-204ENST00000542060 4809 ntTSL 2 BASIC20.67■□□□□ 0.9
PKNOX2Q96KN3 PKMYT1-213ENST00000574385 1892 ntAPPRIS P1 TSL 2 BASIC20.67■□□□□ 0.9
PKNOX2Q96KN3 PAK6-202ENST00000455577 4215 ntTSL 2 BASIC20.67■□□□□ 0.9
PKNOX2Q96KN3 TMUB2-212ENST00000589785 1918 ntAPPRIS P3 TSL 2 BASIC20.67■□□□□ 0.9
PKNOX2Q96KN3 BMPER-201ENST00000297161 5031 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
PKNOX2Q96KN3 ITPKB-201ENST00000272117 5822 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
PKNOX2Q96KN3 HES6-206ENST00000409574 738 ntTSL 2 BASIC20.67■□□□□ 0.9
PKNOX2Q96KN3 AC103702.2-201ENST00000433510 1270 ntTSL 2 BASIC20.67■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 11.6 ms