Protein–RNA interactions for Protein: Q96KA5

CLPTM1L, Cleft lip and palate transmembrane protein 1-like protein, humanhuman

Predictions only

Length 538 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLPTM1LQ96KA5 AC093762.3-201ENST00000641918 318 ntAPPRIS P1 BASIC18.43■□□□□ 0.54
CLPTM1LQ96KA5 TMEM198-201ENST00000344458 2393 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
CLPTM1LQ96KA5 SORCS3-201ENST00000369699 5530 ntAPPRIS P1 TSL 5 BASIC18.43■□□□□ 0.54
CLPTM1LQ96KA5 HAUS4-202ENST00000342454 1474 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
CLPTM1LQ96KA5 BCS1L-201ENST00000359273 1454 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
CLPTM1LQ96KA5 CELF6-205ENST00000567083 1496 ntAPPRIS ALT2 TSL 2 BASIC18.43■□□□□ 0.54
CLPTM1LQ96KA5 CBFB-202ENST00000412916 2971 ntAPPRIS ALT1 TSL 1 (best) BASIC18.43■□□□□ 0.54
CLPTM1LQ96KA5 ISYNA1-206ENST00000578963 1691 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
CLPTM1LQ96KA5 NFKBIZ-201ENST00000326151 2058 ntTSL 2 BASIC18.43■□□□□ 0.54
CLPTM1LQ96KA5 ARPC5L-201ENST00000259477 1325 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
CLPTM1LQ96KA5 SUN1-220ENST00000457378 1309 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
CLPTM1LQ96KA5 TRMT6-201ENST00000203001 2327 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
CLPTM1LQ96KA5 CACNA1B-204ENST00000371357 9642 ntAPPRIS ALT2 TSL 5 BASIC18.42■□□□□ 0.54
CLPTM1LQ96KA5 AC008060.1-201ENST00000401499 1551 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
CLPTM1LQ96KA5 SHISA3-201ENST00000319234 1971 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
CLPTM1LQ96KA5 HARBI1-201ENST00000326737 1967 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
CLPTM1LQ96KA5 SLC35F5-201ENST00000245680 4412 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
CLPTM1LQ96KA5 MSL1-202ENST00000398532 4707 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
CLPTM1LQ96KA5 PRSS33-201ENST00000293851 1694 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
CLPTM1LQ96KA5 ACYP2-201ENST00000303536 789 ntTSL 2 BASIC18.42■□□□□ 0.54
CLPTM1LQ96KA5 RBP4-201ENST00000371464 1068 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
CLPTM1LQ96KA5 RHOF-204ENST00000537265 699 ntTSL 2 BASIC18.42■□□□□ 0.54
CLPTM1LQ96KA5 HSD17B14-204ENST00000599157 991 ntTSL 3 BASIC18.42■□□□□ 0.54
CLPTM1LQ96KA5 STRN4-201ENST00000263280 3210 ntAPPRIS P3 TSL 1 (best) BASIC18.42■□□□□ 0.54
CLPTM1LQ96KA5 SMTN-204ENST00000404574 1735 ntTSL 2 BASIC18.42■□□□□ 0.54
CLPTM1LQ96KA5 P2RY6-202ENST00000393590 2398 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
CLPTM1LQ96KA5 NFATC1-210ENST00000587635 2195 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
CLPTM1LQ96KA5 TAPT1-201ENST00000405303 4591 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
CLPTM1LQ96KA5 BSCL2-207ENST00000407022 1516 ntAPPRIS P3 TSL 1 (best) BASIC18.42■□□□□ 0.54
CLPTM1LQ96KA5 NDRG2-227ENST00000554143 1980 ntAPPRIS ALT1 TSL 2 BASIC18.42■□□□□ 0.54
CLPTM1LQ96KA5 CCDC107-205ENST00000421582 1324 ntAPPRIS ALT2 TSL 2 BASIC18.42■□□□□ 0.54
CLPTM1LQ96KA5 CCNA1-202ENST00000440264 1758 ntAPPRIS P1 TSL 2 BASIC18.42■□□□□ 0.54
CLPTM1LQ96KA5 KCTD12-201ENST00000377474 6225 ntAPPRIS P1 BASIC18.42■□□□□ 0.54
CLPTM1LQ96KA5 CSRNP1-201ENST00000273153 3148 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
CLPTM1LQ96KA5 PIK3R2-201ENST00000222254 4033 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
CLPTM1LQ96KA5 TGIF1-207ENST00000407501 1585 ntAPPRIS P1 TSL 3 BASIC18.42■□□□□ 0.54
CLPTM1LQ96KA5 SDHAP1-207ENST00000440850 2000 ntBASIC18.42■□□□□ 0.54
CLPTM1LQ96KA5 PITPNC1-201ENST00000299954 6359 ntAPPRIS ALT2 TSL 5 BASIC18.42■□□□□ 0.54
CLPTM1LQ96KA5 C8orf58-207ENST00000615223 1848 ntAPPRIS ALT2 TSL 5 BASIC18.42■□□□□ 0.54
CLPTM1LQ96KA5 GAS2L1P2-201ENST00000436355 1356 ntBASIC18.42■□□□□ 0.54
CLPTM1LQ96KA5 ZNF12-204ENST00000405858 5051 ntAPPRIS P4 TSL 1 (best) BASIC18.42■□□□□ 0.54
CLPTM1LQ96KA5 RNF222-201ENST00000344001 2786 ntAPPRIS P1 BASIC18.42■□□□□ 0.54
CLPTM1LQ96KA5 REPS1-202ENST00000367663 2607 ntAPPRIS ALT1 TSL 5 BASIC18.41■□□□□ 0.54
CLPTM1LQ96KA5 APCDD1-201ENST00000355285 3809 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
CLPTM1LQ96KA5 RBFOX1-204ENST00000422070 1684 ntTSL 2 BASIC18.41■□□□□ 0.54
CLPTM1LQ96KA5 PSMG4-209ENST00000473000 4603 ntTSL 2 BASIC18.41■□□□□ 0.54
CLPTM1LQ96KA5 AC018553.1-201ENST00000616682 1458 ntBASIC18.41■□□□□ 0.54
CLPTM1LQ96KA5 QSOX2-201ENST00000358701 4530 ntAPPRIS P1 TSL 2 BASIC18.41■□□□□ 0.54
CLPTM1LQ96KA5 THOC3-208ENST00000513482 1796 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
CLPTM1LQ96KA5 CLMP-201ENST00000448775 5072 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
CLPTM1LQ96KA5 EIF6-203ENST00000374450 1289 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
CLPTM1LQ96KA5 NGEF-203ENST00000409079 1022 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
CLPTM1LQ96KA5 HM13-AS1-201ENST00000412178 489 ntTSL 3 BASIC18.41■□□□□ 0.54
CLPTM1LQ96KA5 CDKN3-207ENST00000543789 610 ntTSL 5 BASIC18.41■□□□□ 0.54
CLPTM1LQ96KA5 AC016405.3-201ENST00000607710 860 ntBASIC18.41■□□□□ 0.54
CLPTM1LQ96KA5 AP001160.5-201ENST00000636508 485 ntAPPRIS P1 BASIC18.41■□□□□ 0.54
CLPTM1LQ96KA5 MYO9A-214ENST00000566885 5111 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
CLPTM1LQ96KA5 AC008764.6-201ENST00000595909 2069 ntBASIC18.41■□□□□ 0.54
CLPTM1LQ96KA5 FN3KRP-201ENST00000269373 1849 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
CLPTM1LQ96KA5 MAP7-203ENST00000438100 2633 ntAPPRIS ALT2 TSL 2 BASIC18.41■□□□□ 0.54
CLPTM1LQ96KA5 RHOB-201ENST00000272233 2372 ntAPPRIS P1 BASIC18.41■□□□□ 0.54
CLPTM1LQ96KA5 CADPS2-208ENST00000615869 6066 ntAPPRIS ALT1 TSL 5 BASIC18.41■□□□□ 0.54
CLPTM1LQ96KA5 UTP18-201ENST00000225298 1894 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
CLPTM1LQ96KA5 EIF2AK3-201ENST00000303236 4646 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
CLPTM1LQ96KA5 SPHK2-213ENST00000601712 1394 ntAPPRIS ALT2 TSL 5 BASIC18.41■□□□□ 0.54
CLPTM1LQ96KA5 NSFL1C-206ENST00000476071 2800 ntTSL 5 BASIC18.41■□□□□ 0.54
CLPTM1LQ96KA5 ZDHHC24-203ENST00000526986 1424 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
CLPTM1LQ96KA5 TNIP1-221ENST00000610874 2629 ntTSL 5 BASIC18.4■□□□□ 0.54
CLPTM1LQ96KA5 SIM2-201ENST00000290399 4442 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
CLPTM1LQ96KA5 PIF1-201ENST00000268043 2687 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
CLPTM1LQ96KA5 PLEKHA2-206ENST00000521746 2127 ntTSL 5 BASIC18.4■□□□□ 0.54
CLPTM1LQ96KA5 HEXDC-203ENST00000577944 1820 ntTSL 5 BASIC18.4■□□□□ 0.54
CLPTM1LQ96KA5 SMG5-201ENST00000361813 4559 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
CLPTM1LQ96KA5 HNRNPLL-202ENST00000358367 2779 ntTSL 5 BASIC18.4■□□□□ 0.54
CLPTM1LQ96KA5 LGALS7B-201ENST00000314980 483 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
CLPTM1LQ96KA5 ASMT-202ENST00000381233 989 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
CLPTM1LQ96KA5 DHRS4-202ENST00000397074 785 ntTSL 5 BASIC18.4■□□□□ 0.54
CLPTM1LQ96KA5 AC106820.5-201ENST00000566085 789 ntTSL 3 BASIC18.4■□□□□ 0.54
CLPTM1LQ96KA5 PLAGL1-207ENST00000417959 1645 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
CLPTM1LQ96KA5 MEPCE-201ENST00000310512 3030 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
CLPTM1LQ96KA5 DUSP1-201ENST00000239223 2019 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
CLPTM1LQ96KA5 TXNRD3-202ENST00000523403 2351 ntAPPRIS ALT2 TSL 2 BASIC18.4■□□□□ 0.54
CLPTM1LQ96KA5 ZC3H12D-201ENST00000409806 5791 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
CLPTM1LQ96KA5 ADK-202ENST00000372734 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC18.4■□□□□ 0.54
CLPTM1LQ96KA5 ADRA1A-205ENST00000380582 2089 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
CLPTM1LQ96KA5 MTX1-201ENST00000316721 1441 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
CLPTM1LQ96KA5 AC004854.2-201ENST00000608450 1441 ntBASIC18.4■□□□□ 0.54
CLPTM1LQ96KA5 SMC4-201ENST00000344722 5356 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
CLPTM1LQ96KA5 MAN1A1-201ENST00000368468 5014 ntAPPRIS P1 TSL 2 BASIC18.4■□□□□ 0.54
CLPTM1LQ96KA5 ARFIP2-201ENST00000254584 2543 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
CLPTM1LQ96KA5 RIPK2-201ENST00000220751 2584 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
CLPTM1LQ96KA5 VSTM2B-201ENST00000335523 1488 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.54
CLPTM1LQ96KA5 KLHL22-201ENST00000328879 2616 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
CLPTM1LQ96KA5 AC018755.2-202ENST00000429354 1926 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
CLPTM1LQ96KA5 TMPRSS5-205ENST00000538955 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
CLPTM1LQ96KA5 BCAR1-201ENST00000162330 3221 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.53
CLPTM1LQ96KA5 HOXC11-201ENST00000243082 2039 ntTSL 3 BASIC18.39■□□□□ 0.53
CLPTM1LQ96KA5 FRS3-201ENST00000259748 2094 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
CLPTM1LQ96KA5 SALRNA1-201ENST00000555871 2086 ntTSL 4 BASIC18.39■□□□□ 0.53
CLPTM1LQ96KA5 EFNA2-201ENST00000215368 949 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 23.2 ms