Protein–RNA interactions for Protein: Q96GM5

SMARCD1, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 1, humanhuman

Predictions only

Length 515 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD1Q96GM5 ELMOD1-206ENST00000531234 1832 ntTSL 2 BASIC20.2■□□□□ 0.82
SMARCD1Q96GM5 LRPPRC-202ENST00000409659 1610 ntTSL 5 BASIC20.2■□□□□ 0.82
SMARCD1Q96GM5 FBXL16-203ENST00000562563 2257 ntTSL 2 BASIC20.2■□□□□ 0.82
SMARCD1Q96GM5 FAM171A2-201ENST00000293443 3160 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
SMARCD1Q96GM5 PCCB-208ENST00000468777 1877 ntAPPRIS ALT2 TSL 3 BASIC20.2■□□□□ 0.82
SMARCD1Q96GM5 GOSR2-210ENST00000576910 1891 ntAPPRIS ALT1 TSL 5 BASIC20.2■□□□□ 0.82
SMARCD1Q96GM5 DSCC1-201ENST00000313655 2314 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
SMARCD1Q96GM5 C18orf25-204ENST00000615553 2329 ntTSL 5 BASIC20.2■□□□□ 0.82
SMARCD1Q96GM5 LAMC3-202ENST00000361069 6133 ntAPPRIS P1 TSL 2 BASIC20.2■□□□□ 0.82
SMARCD1Q96GM5 GPR3-201ENST00000374024 2115 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
SMARCD1Q96GM5 STX6-204ENST00000542060 4809 ntTSL 2 BASIC20.2■□□□□ 0.82
SMARCD1Q96GM5 ZIC4-209ENST00000473123 1481 ntAPPRIS P1 TSL 2 BASIC20.2■□□□□ 0.82
SMARCD1Q96GM5 CAPN10-203ENST00000352879 862 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
SMARCD1Q96GM5 ZCCHC24-201ENST00000372333 906 ntTSL 2 BASIC20.2■□□□□ 0.82
SMARCD1Q96GM5 SLC39A2-203ENST00000554422 1259 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
SMARCD1Q96GM5 AC090970.2-201ENST00000561318 865 ntTSL 5 BASIC20.2■□□□□ 0.82
SMARCD1Q96GM5 SLC39A11-207ENST00000579732 1004 ntTSL 2 BASIC20.2■□□□□ 0.82
SMARCD1Q96GM5 AC006942.1-201ENST00000600669 520 ntTSL 2 BASIC20.2■□□□□ 0.82
SMARCD1Q96GM5 ESR2-212ENST00000556275 2695 ntTSL 2 BASIC20.2■□□□□ 0.82
SMARCD1Q96GM5 DLGAP4-204ENST00000373913 5056 ntAPPRIS P4 TSL 1 (best) BASIC20.2■□□□□ 0.82
SMARCD1Q96GM5 SRP68-201ENST00000307877 2649 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
SMARCD1Q96GM5 GAL3ST1-206ENST00000406955 1635 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
SMARCD1Q96GM5 HCG18-235ENST00000426882 4862 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
SMARCD1Q96GM5 RBPMS-210ENST00000520191 1613 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
SMARCD1Q96GM5 DBX1-201ENST00000524983 1380 ntAPPRIS P1 TSL 5 BASIC20.2■□□□□ 0.82
SMARCD1Q96GM5 DUT-202ENST00000455976 1935 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
SMARCD1Q96GM5 AC124066.1-201ENST00000581122 1660 ntTSL 5 BASIC20.19■□□□□ 0.82
SMARCD1Q96GM5 AC026412.3-201ENST00000605200 1661 ntTSL 5 BASIC20.19■□□□□ 0.82
SMARCD1Q96GM5 KRT17-205ENST00000540235 1438 ntTSL 5 BASIC20.19■□□□□ 0.82
SMARCD1Q96GM5 HSPD1-202ENST00000388968 2455 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
SMARCD1Q96GM5 E4F1-204ENST00000564139 2493 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
SMARCD1Q96GM5 BTBD1-202ENST00000379403 1467 ntTSL 5 BASIC20.19■□□□□ 0.82
SMARCD1Q96GM5 GNB1-201ENST00000378609 3132 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
SMARCD1Q96GM5 SELENOF-207ENST00000611507 1785 ntTSL 5 BASIC20.19■□□□□ 0.82
SMARCD1Q96GM5 ZNF843-203ENST00000618063 1765 ntAPPRIS P2 TSL 1 (best) BASIC20.19■□□□□ 0.82
SMARCD1Q96GM5 HOXC4-201ENST00000303406 1524 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
SMARCD1Q96GM5 HIST1H2APS4-201ENST00000362070 348 ntBASIC20.19■□□□□ 0.82
SMARCD1Q96GM5 TRAPPC3-204ENST00000373166 1265 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
SMARCD1Q96GM5 SLC25A1P2-201ENST00000430693 912 ntBASIC20.19■□□□□ 0.82
SMARCD1Q96GM5 C20orf166-AS1-202ENST00000436101 761 ntTSL 5 BASIC20.19■□□□□ 0.82
SMARCD1Q96GM5 UNC5B-AS1-201ENST00000447119 647 ntTSL 2 BASIC20.19■□□□□ 0.82
SMARCD1Q96GM5 ABHD11-207ENST00000458339 890 ntTSL 3 BASIC20.19■□□□□ 0.82
SMARCD1Q96GM5 ETS1-207ENST00000531611 2134 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
SMARCD1Q96GM5 SLC25A11-202ENST00000544061 952 ntTSL 3 BASIC20.19■□□□□ 0.82
SMARCD1Q96GM5 KCNK6-201ENST00000263372 5722 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
SMARCD1Q96GM5 KRT18P22-201ENST00000402024 1347 ntBASIC20.19■□□□□ 0.82
SMARCD1Q96GM5 FAM118A-202ENST00000405673 1612 ntTSL 5 BASIC20.19■□□□□ 0.82
SMARCD1Q96GM5 APBB1-210ENST00000530885 1626 ntTSL 2 BASIC20.19■□□□□ 0.82
SMARCD1Q96GM5 TRMT6-202ENST00000453074 2239 ntTSL 2 BASIC20.19■□□□□ 0.82
SMARCD1Q96GM5 LAYN-203ENST00000436913 2590 ntTSL 2 BASIC20.19■□□□□ 0.82
SMARCD1Q96GM5 AMDHD1-201ENST00000266736 2260 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
SMARCD1Q96GM5 RBM6-204ENST00000422955 2324 ntTSL 2 BASIC20.19■□□□□ 0.82
SMARCD1Q96GM5 PLD4-204ENST00000540372 2007 ntAPPRIS ALT2 TSL 2 BASIC20.19■□□□□ 0.82
SMARCD1Q96GM5 EARS2-210ENST00000564501 2027 ntTSL 5 BASIC20.19■□□□□ 0.82
SMARCD1Q96GM5 SLC35A2-217ENST00000635589 1424 ntTSL 2 BASIC20.19■□□□□ 0.82
SMARCD1Q96GM5 SOX4-201ENST00000244745 5852 ntAPPRIS P1 BASIC20.19■□□□□ 0.82
SMARCD1Q96GM5 AC005906.2-207ENST00000639005 1580 ntTSL 5 BASIC20.18■□□□□ 0.82
SMARCD1Q96GM5 FOXD4-201ENST00000382500 1974 ntAPPRIS P1 BASIC20.18■□□□□ 0.82
SMARCD1Q96GM5 TPPP3-201ENST00000290942 1116 ntAPPRIS P1 TSL 2 BASIC20.18■□□□□ 0.82
SMARCD1Q96GM5 TMIGD2-201ENST00000301272 1262 ntAPPRIS P3 TSL 1 (best) BASIC20.18■□□□□ 0.82
SMARCD1Q96GM5 PTMS-201ENST00000309083 1139 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
SMARCD1Q96GM5 ZNF584-202ENST00000322834 1042 ntTSL 2 BASIC20.18■□□□□ 0.82
SMARCD1Q96GM5 ING1-202ENST00000338450 1189 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
SMARCD1Q96GM5 TPPP3-202ENST00000393957 1058 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
SMARCD1Q96GM5 ZNF534-203ENST00000432303 956 ntTSL 2 BASIC20.18■□□□□ 0.82
SMARCD1Q96GM5 CT47A1-201ENST00000433030 1288 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
SMARCD1Q96GM5 CA15P1-201ENST00000481698 905 ntBASIC20.18■□□□□ 0.82
SMARCD1Q96GM5 AC128688.1-201ENST00000487626 519 ntBASIC20.18■□□□□ 0.82
SMARCD1Q96GM5 AZIN1-AS1-215ENST00000522939 644 ntTSL 2 BASIC20.18■□□□□ 0.82
SMARCD1Q96GM5 FFAR4-203ENST00000604414 1142 ntTSL 3 BASIC20.18■□□□□ 0.82
SMARCD1Q96GM5 DUSP1-201ENST00000239223 2019 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
SMARCD1Q96GM5 AKIRIN2-201ENST00000257787 1662 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
SMARCD1Q96GM5 OGG1-201ENST00000302003 1655 ntAPPRIS P4 TSL 1 (best) BASIC20.18■□□□□ 0.82
SMARCD1Q96GM5 CCDC91-207ENST00000539107 2440 ntTSL 5 BASIC20.18■□□□□ 0.82
SMARCD1Q96GM5 PAN3-201ENST00000380958 2833 ntAPPRIS P2 TSL 5 BASIC20.18■□□□□ 0.82
SMARCD1Q96GM5 NFIL3-201ENST00000297689 2085 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
SMARCD1Q96GM5 SEC11C-202ENST00000509791 2054 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
SMARCD1Q96GM5 BIRC7-202ENST00000342412 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
SMARCD1Q96GM5 AC104581.1-201ENST00000324348 2852 ntAPPRIS P1 TSL 2 BASIC20.18■□□□□ 0.82
SMARCD1Q96GM5 OTOP2-201ENST00000331427 2147 ntAPPRIS P1 TSL 5 BASIC20.18■□□□□ 0.82
SMARCD1Q96GM5 PIGQ-209ENST00000470411 2112 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
SMARCD1Q96GM5 NCK2-205ENST00000451463 1795 ntTSL 2 BASIC20.18■□□□□ 0.82
SMARCD1Q96GM5 SUSD1-202ENST00000374263 2973 ntAPPRIS ALT2 TSL 2 BASIC20.18■□□□□ 0.82
SMARCD1Q96GM5 RASSF1-202ENST00000357043 1864 ntAPPRIS P3 TSL 1 (best) BASIC20.18■□□□□ 0.82
SMARCD1Q96GM5 SOBP-201ENST00000317357 5245 ntAPPRIS P1 TSL 5 BASIC20.18■□□□□ 0.82
SMARCD1Q96GM5 SMARCD2-203ENST00000448276 2716 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
SMARCD1Q96GM5 NECAB3-202ENST00000375238 1942 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
SMARCD1Q96GM5 RABEPK-202ENST00000373538 1504 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
SMARCD1Q96GM5 RFC2-213ENST00000621097 1635 ntTSL 5 BASIC20.17■□□□□ 0.82
SMARCD1Q96GM5 FFAR3-201ENST00000327809 1796 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
SMARCD1Q96GM5 ERICH4-201ENST00000378187 946 ntAPPRIS P1 TSL 5 BASIC20.17■□□□□ 0.82
SMARCD1Q96GM5 TSPY1-201ENST00000423647 1171 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
SMARCD1Q96GM5 CYB561D2-204ENST00000424512 1212 ntAPPRIS P1 TSL 5 BASIC20.17■□□□□ 0.82
SMARCD1Q96GM5 CCR12P-201ENST00000446203 998 ntBASIC20.17■□□□□ 0.82
SMARCD1Q96GM5 BNIP3L-206ENST00000523515 915 ntTSL 2 BASIC20.17■□□□□ 0.82
SMARCD1Q96GM5 PSMD9-208ENST00000542602 516 ntTSL 3 BASIC20.17■□□□□ 0.82
SMARCD1Q96GM5 TSTD3-202ENST00000636394 336 ntAPPRIS ALT2 TSL 3 BASIC20.17■□□□□ 0.82
SMARCD1Q96GM5 PLEKHA8-203ENST00000396259 2840 ntTSL 2 BASIC20.17■□□□□ 0.82
SMARCD1Q96GM5 CALM2-201ENST00000272298 1302 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
SMARCD1Q96GM5 TM9SF1-203ENST00000524835 1938 ntTSL 2 BASIC20.17■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 26 ms