Protein–RNA interactions for Protein: Q96F63

CCDC97, Coiled-coil domain-containing protein 97, humanhuman

Predicted RBP Predictions only

Length 343 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC97Q96F63 PRR14-202ENST00000300835 2198 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
CCDC97Q96F63 SYNPO-201ENST00000307662 5374 ntAPPRIS P3 TSL 1 (best) BASIC19.54■□□□□ 0.72
CCDC97Q96F63 TRIM73-202ENST00000430211 1321 ntAPPRIS ALT2 TSL 2 BASIC19.54■□□□□ 0.72
CCDC97Q96F63 ARRB2-216ENST00000574954 1348 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
CCDC97Q96F63 SLC39A4-201ENST00000276833 2297 ntTSL 2 BASIC19.54■□□□□ 0.72
CCDC97Q96F63 WWOX-202ENST00000402655 1594 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
CCDC97Q96F63 AC009237.14-201ENST00000609975 1594 ntBASIC19.54■□□□□ 0.72
CCDC97Q96F63 FOXO3-201ENST00000343882 7308 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
CCDC97Q96F63 MED26-207ENST00000611692 1444 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
CCDC97Q96F63 POMC-201ENST00000264708 1074 ntAPPRIS P1 TSL 2 BASIC19.54■□□□□ 0.72
CCDC97Q96F63 TRAPPC3-204ENST00000373166 1265 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
CCDC97Q96F63 DNAJC27-AS1-204ENST00000428614 780 ntTSL 3 BASIC19.54■□□□□ 0.72
CCDC97Q96F63 PNN-205ENST00000556530 601 ntTSL 2 BASIC19.54■□□□□ 0.72
CCDC97Q96F63 CBFB-203ENST00000561924 584 ntTSL 5 BASIC19.54■□□□□ 0.72
CCDC97Q96F63 CMTM3-207ENST00000564060 824 ntTSL 2 BASIC19.54■□□□□ 0.72
CCDC97Q96F63 CMTM3-211ENST00000565922 615 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
CCDC97Q96F63 FAM98C-205ENST00000588262 826 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
CCDC97Q96F63 LINC00654-202ENST00000589201 579 ntTSL 3 BASIC19.54■□□□□ 0.72
CCDC97Q96F63 Six3os1_6.1-201ENST00000620790 196 ntBASIC19.54■□□□□ 0.72
CCDC97Q96F63 FAM91A1-207ENST00000521166 2706 ntTSL 2 BASIC19.54■□□□□ 0.72
CCDC97Q96F63 UTP4-201ENST00000314423 2322 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
CCDC97Q96F63 TRPC1-203ENST00000476941 3061 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
CCDC97Q96F63 NID1-202ENST00000366595 5412 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
CCDC97Q96F63 FOLH1-203ENST00000343844 2258 ntTSL 2 BASIC19.54■□□□□ 0.72
CCDC97Q96F63 GOLGA2P11-201ENST00000562660 1621 ntBASIC19.54■□□□□ 0.72
CCDC97Q96F63 MON2-203ENST00000546600 6130 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
CCDC97Q96F63 UBE2F-205ENST00000414443 2100 ntTSL 2 BASIC19.54■□□□□ 0.72
CCDC97Q96F63 PDLIM2-207ENST00000409417 1487 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
CCDC97Q96F63 NBL1-209ENST00000548815 1953 ntAPPRIS P3 TSL 3 BASIC19.53■□□□□ 0.72
CCDC97Q96F63 C20orf27-201ENST00000217195 1302 ntTSL 2 BASIC19.53■□□□□ 0.72
CCDC97Q96F63 ATP2A3-201ENST00000309890 4826 ntTSL 5 BASIC19.53■□□□□ 0.72
CCDC97Q96F63 KRT18-202ENST00000388837 1420 ntAPPRIS P1 TSL 5 BASIC19.53■□□□□ 0.72
CCDC97Q96F63 AL135905.2-201ENST00000584934 1404 ntBASIC19.53■□□□□ 0.72
CCDC97Q96F63 CACNA1H-206ENST00000565831 7815 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
CCDC97Q96F63 SSBP2-218ENST00000514493 1790 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
CCDC97Q96F63 SEPT8-216ENST00000620483 4335 ntTSL 5 BASIC19.53■□□□□ 0.72
CCDC97Q96F63 PTS-201ENST00000280362 935 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
CCDC97Q96F63 IMMP2L-201ENST00000331762 1205 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
CCDC97Q96F63 CAPN10-203ENST00000352879 862 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
CCDC97Q96F63 ISG20-202ENST00000379224 540 ntTSL 3 BASIC19.53■□□□□ 0.72
CCDC97Q96F63 NDUFAF3-204ENST00000451378 774 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
CCDC97Q96F63 AL162258.1-201ENST00000497086 753 ntTSL 2 BASIC19.53■□□□□ 0.72
CCDC97Q96F63 BX088651.1-201ENST00000540551 451 ntBASIC19.53■□□□□ 0.72
CCDC97Q96F63 AC090877.2-202ENST00000560363 574 ntTSL 2 BASIC19.53■□□□□ 0.72
CCDC97Q96F63 ISG20-210ENST00000560741 800 ntAPPRIS P1 TSL 5 BASIC19.53■□□□□ 0.72
CCDC97Q96F63 AC027682.2-201ENST00000563083 336 ntTSL 5 BASIC19.53■□□□□ 0.72
CCDC97Q96F63 ZNF688-205ENST00000563707 244 ntTSL 3 BASIC19.53■□□□□ 0.72
CCDC97Q96F63 AC009090.2-201ENST00000565829 472 ntTSL 3 BASIC19.53■□□□□ 0.72
CCDC97Q96F63 AC233702.5-201ENST00000584107 538 ntBASIC19.53■□□□□ 0.72
CCDC97Q96F63 NCBP2-AS2-201ENST00000602845 918 ntAPPRIS P1 BASIC19.53■□□□□ 0.72
CCDC97Q96F63 C20orf204-205ENST00000636176 961 ntAPPRIS P5 TSL 5 BASIC19.53■□□□□ 0.72
CCDC97Q96F63 MRM1-204ENST00000614766 1857 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
CCDC97Q96F63 TMEM179-206ENST00000616017 1645 ntBASIC19.53■□□□□ 0.72
CCDC97Q96F63 ARMC9-201ENST00000349938 2300 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
CCDC97Q96F63 NDOR1-204ENST00000458322 1829 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
CCDC97Q96F63 TRMU-201ENST00000290846 1940 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
CCDC97Q96F63 TH-206ENST00000381178 1910 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
CCDC97Q96F63 WNT7B-202ENST00000409496 2285 ntAPPRIS ALT1 TSL 2 BASIC19.53■□□□□ 0.72
CCDC97Q96F63 ASMTL-206ENST00000534940 2048 ntTSL 2 BASIC19.52■□□□□ 0.72
CCDC97Q96F63 ADARB1-202ENST00000360697 6604 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
CCDC97Q96F63 MPV17L2-204ENST00000599612 1408 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
CCDC97Q96F63 PARP2-202ENST00000429687 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.72
CCDC97Q96F63 PTPN21-208ENST00000556564 6166 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
CCDC97Q96F63 PPM1D-204ENST00000629650 1525 ntTSL 5 BASIC19.52■□□□□ 0.72
CCDC97Q96F63 KCNN2-207ENST00000610748 2091 ntTSL 3 BASIC19.52■□□□□ 0.72
CCDC97Q96F63 RUVBL2-211ENST00000601968 1641 ntTSL 5 BASIC19.52■□□□□ 0.72
CCDC97Q96F63 PML-204ENST00000359928 1726 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
CCDC97Q96F63 COX7A2L-201ENST00000234301 1112 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
CCDC97Q96F63 PDZRN3-202ENST00000308537 1136 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
CCDC97Q96F63 PLEKHB2-203ENST00000404460 1167 ntTSL 2 BASIC19.52■□□□□ 0.72
CCDC97Q96F63 DCAKD-205ENST00000588499 990 ntAPPRIS P1 TSL 2 BASIC19.52■□□□□ 0.72
CCDC97Q96F63 MTDHP1-201ENST00000605323 784 ntBASIC19.52■□□□□ 0.72
CCDC97Q96F63 EML2-220ENST00000589876 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.72
CCDC97Q96F63 PLCD3-212ENST00000619929 6107 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
CCDC97Q96F63 MICU2-201ENST00000382374 1920 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
CCDC97Q96F63 TMEM91-203ENST00000392002 1389 ntAPPRIS P1 TSL 2 BASIC19.52■□□□□ 0.72
CCDC97Q96F63 CELF6-205ENST00000567083 1496 ntAPPRIS ALT2 TSL 2 BASIC19.52■□□□□ 0.72
CCDC97Q96F63 ASCC1-205ENST00000394919 2683 ntAPPRIS P1 TSL 2 BASIC19.52■□□□□ 0.72
CCDC97Q96F63 RTKN-201ENST00000233330 2220 ntTSL 1 (best) BASIC19.52■□□□□ 0.71
CCDC97Q96F63 LINC01168-201ENST00000461291 5254 ntTSL 2 BASIC19.52■□□□□ 0.71
CCDC97Q96F63 PSKH2-201ENST00000276616 1322 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
CCDC97Q96F63 RNF217-211ENST00000560949 5145 ntAPPRIS ALT2 TSL 5 BASIC19.51■□□□□ 0.71
CCDC97Q96F63 POU5F1-201ENST00000259915 1420 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
CCDC97Q96F63 DHX33-201ENST00000225296 5618 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
CCDC97Q96F63 NLRP6-201ENST00000312165 2679 ntAPPRIS P3 TSL 1 (best) BASIC19.51■□□□□ 0.71
CCDC97Q96F63 GALNT16-204ENST00000553669 1629 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
CCDC97Q96F63 NINL-201ENST00000278886 4969 ntAPPRIS P3 TSL 1 (best) BASIC19.51■□□□□ 0.71
CCDC97Q96F63 CRTAC1-203ENST00000370597 2890 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
CCDC97Q96F63 PAIP1-203ENST00000436644 1734 ntAPPRIS ALT1 TSL 1 (best) BASIC19.51■□□□□ 0.71
CCDC97Q96F63 FNIP1-204ENST00000511848 1720 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
CCDC97Q96F63 FAM110A-204ENST00000381941 1809 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
CCDC97Q96F63 ACADVL-203ENST00000356839 2323 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
CCDC97Q96F63 USP21-203ENST00000368002 2342 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
CCDC97Q96F63 KIF13B-206ENST00000524189 8745 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
CCDC97Q96F63 TTTY14-205ENST00000454875 544 ntTSL 2 BASIC19.51■□□□□ 0.71
CCDC97Q96F63 PAIP2-208ENST00000511706 468 ntTSL 5 BASIC19.51■□□□□ 0.71
CCDC97Q96F63 AP001458.2-201ENST00000528405 577 ntAPPRIS P1 TSL 4 BASIC19.51■□□□□ 0.71
CCDC97Q96F63 ZNF134-203ENST00000600344 483 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
CCDC97Q96F63 PCDHB11-202ENST00000624887 1973 ntTSL 2 BASIC19.51■□□□□ 0.71
CCDC97Q96F63 PFKFB3-217ENST00000626882 1965 ntTSL 5 BASIC19.51■□□□□ 0.71
Retrieved 100 of 98,524 protein–RNA pairs in 22.9 ms