Protein–RNA interactions for Protein: Q96AX1

VPS33A, Vacuolar protein sorting-associated protein 33A, humanhuman

Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33AQ96AX1 C21orf91-203ENST00000400559 1593 ntAPPRIS ALT1 TSL 5 BASIC18.43■□□□□ 0.54
VPS33AQ96AX1 MAPT-209ENST00000446361 5345 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
VPS33AQ96AX1 PPP1R36-201ENST00000298705 1405 ntAPPRIS P2 TSL 1 (best) BASIC18.43■□□□□ 0.54
VPS33AQ96AX1 PTPN12-201ENST00000248594 3406 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
VPS33AQ96AX1 SUPT4H1-202ENST00000577396 1643 ntTSL 2 BASIC18.43■□□□□ 0.54
VPS33AQ96AX1 SLC6A9-201ENST00000357730 2168 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
VPS33AQ96AX1 MFF-205ENST00000354503 1085 ntTSL 2 BASIC18.43■□□□□ 0.54
VPS33AQ96AX1 AL390719.1-204ENST00000412397 1219 ntBASIC18.43■□□□□ 0.54
VPS33AQ96AX1 BX276092.2-201ENST00000417668 665 ntBASIC18.43■□□□□ 0.54
VPS33AQ96AX1 ARL5A-202ENST00000428992 747 ntTSL 2 BASIC18.43■□□□□ 0.54
VPS33AQ96AX1 AC092437.1-201ENST00000624794 1048 ntBASIC18.43■□□□□ 0.54
VPS33AQ96AX1 LTBP3-202ENST00000322147 4046 ntAPPRIS P3 TSL 1 (best) BASIC18.43■□□□□ 0.54
VPS33AQ96AX1 COL18A1-202ENST00000355480 5924 ntAPPRIS P3 TSL 1 (best) BASIC18.43■□□□□ 0.54
VPS33AQ96AX1 ST6GALNAC4-201ENST00000335791 1691 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
VPS33AQ96AX1 PAOX-201ENST00000278060 1858 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
VPS33AQ96AX1 NSMAF-202ENST00000427130 3371 ntTSL 2 BASIC18.43■□□□□ 0.54
VPS33AQ96AX1 AC005082.1-201ENST00000413042 2259 ntBASIC18.43■□□□□ 0.54
VPS33AQ96AX1 WIZP1-201ENST00000531444 2299 ntBASIC18.43■□□□□ 0.54
VPS33AQ96AX1 UBN1-201ENST00000262376 6252 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
VPS33AQ96AX1 MMP9-201ENST00000372330 2336 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
VPS33AQ96AX1 KLHL40-201ENST00000287777 2517 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
VPS33AQ96AX1 MSL1-202ENST00000398532 4707 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
VPS33AQ96AX1 NAA60-235ENST00000576916 1567 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
VPS33AQ96AX1 AC104417.2-201ENST00000562989 1793 ntBASIC18.42■□□□□ 0.54
VPS33AQ96AX1 ELL2-201ENST00000237853 6046 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
VPS33AQ96AX1 SYBU-201ENST00000276646 2870 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
VPS33AQ96AX1 MLNR-201ENST00000218721 1239 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
VPS33AQ96AX1 TCAP-201ENST00000309889 2123 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
VPS33AQ96AX1 TP53BP2-201ENST00000343537 4651 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
VPS33AQ96AX1 KLRG2-202ENST00000393039 1148 ntTSL 5 BASIC18.42■□□□□ 0.54
VPS33AQ96AX1 FAM229A-204ENST00000432622 699 ntAPPRIS P2 TSL 2 BASIC18.42■□□□□ 0.54
VPS33AQ96AX1 COPS7A-215ENST00000543155 2127 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
VPS33AQ96AX1 AC105036.2-201ENST00000569468 176 ntBASIC18.42■□□□□ 0.54
VPS33AQ96AX1 AC005829.2-201ENST00000571422 1056 ntBASIC18.42■□□□□ 0.54
VPS33AQ96AX1 AL050303.2-201ENST00000619798 666 ntBASIC18.42■□□□□ 0.54
VPS33AQ96AX1 MAPK14-210ENST00000622903 1003 ntTSL 5 BASIC18.42■□□□□ 0.54
VPS33AQ96AX1 MARS-234ENST00000630571 216 ntTSL 5 BASIC18.42■□□□□ 0.54
VPS33AQ96AX1 MARS-235ENST00000630803 183 ntTSL 3 BASIC18.42■□□□□ 0.54
VPS33AQ96AX1 AL032819.3-201ENST00000640283 925 ntAPPRIS P1 TSL 5 BASIC18.42■□□□□ 0.54
VPS33AQ96AX1 CFAP100-203ENST00000505024 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
VPS33AQ96AX1 MPZ-206ENST00000533357 1955 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
VPS33AQ96AX1 MCCC1-214ENST00000610757 2410 ntTSL 5 BASIC18.42■□□□□ 0.54
VPS33AQ96AX1 PRODH-215ENST00000610940 2405 ntAPPRIS P3 TSL 1 (best) BASIC18.42■□□□□ 0.54
VPS33AQ96AX1 UBE2E3-201ENST00000392415 1347 ntAPPRIS P1 TSL 3 BASIC18.42■□□□□ 0.54
VPS33AQ96AX1 NEUROD2-201ENST00000302584 2041 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
VPS33AQ96AX1 LINC01586-201ENST00000506090 1840 ntTSL 2 BASIC18.42■□□□□ 0.54
VPS33AQ96AX1 KCNH1-210ENST00000640044 1818 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
VPS33AQ96AX1 ORAI3-204ENST00000566237 1393 ntTSL 5 BASIC18.42■□□□□ 0.54
VPS33AQ96AX1 NUP50-AS1-201ENST00000426282 2076 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
VPS33AQ96AX1 PRDM5-201ENST00000264808 5330 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
VPS33AQ96AX1 NAPA-210ENST00000595227 1460 ntTSL 3 BASIC18.41■□□□□ 0.54
VPS33AQ96AX1 AL031598.1-201ENST00000561511 1773 ntBASIC18.41■□□□□ 0.54
VPS33AQ96AX1 NEDD8-201ENST00000250495 708 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
VPS33AQ96AX1 CNIH4-203ENST00000366858 702 ntTSL 3 BASIC18.41■□□□□ 0.54
VPS33AQ96AX1 SMNDC1-201ENST00000369592 1110 ntAPPRIS P1 TSL 3 BASIC18.41■□□□□ 0.54
VPS33AQ96AX1 PLAC9-202ENST00000372267 472 ntAPPRIS ALT2 TSL 3 BASIC18.41■□□□□ 0.54
VPS33AQ96AX1 OR2A1-AS1-201ENST00000462305 773 ntBASIC18.41■□□□□ 0.54
VPS33AQ96AX1 AC004889.1-204ENST00000474656 773 ntTSL 3 BASIC18.41■□□□□ 0.54
VPS33AQ96AX1 AC008443.6-201ENST00000512508 500 ntTSL 4 BASIC18.41■□□□□ 0.54
VPS33AQ96AX1 MIR5787-201ENST00000611784 55 ntBASIC18.41■□□□□ 0.54
VPS33AQ96AX1 PTCRA-204ENST00000616441 1125 ntAPPRIS ALT2 TSL 2 BASIC18.41■□□□□ 0.54
VPS33AQ96AX1 SLC5A10-203ENST00000395645 2069 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
VPS33AQ96AX1 DOK4-218ENST00000569548 1848 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
VPS33AQ96AX1 TREX2-203ENST00000338525 2116 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
VPS33AQ96AX1 FGFR3-205ENST00000440486 4287 ntAPPRIS P3 TSL 5 BASIC18.41■□□□□ 0.54
VPS33AQ96AX1 SERPINB6-204ENST00000380529 1370 ntAPPRIS P1 TSL 2 BASIC18.41■□□□□ 0.54
VPS33AQ96AX1 CRK-204ENST00000574295 1391 ntTSL 5 BASIC18.41■□□□□ 0.54
VPS33AQ96AX1 AC073107.1-201ENST00000633579 1962 ntTSL 5 BASIC18.41■□□□□ 0.54
VPS33AQ96AX1 CCAR2-214ENST00000613179 1421 ntTSL 5 BASIC18.4■□□□□ 0.54
VPS33AQ96AX1 SLC25A47-201ENST00000361529 1738 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
VPS33AQ96AX1 DUSP1-201ENST00000239223 2019 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
VPS33AQ96AX1 NUDT10-202ENST00000376006 2001 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
VPS33AQ96AX1 MAN2A1-201ENST00000261483 4667 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
VPS33AQ96AX1 TNPO2-201ENST00000356861 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC18.4■□□□□ 0.54
VPS33AQ96AX1 CHRND-201ENST00000258385 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
VPS33AQ96AX1 PDLIM2-204ENST00000397760 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
VPS33AQ96AX1 ANKMY1-209ENST00000405523 1827 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
VPS33AQ96AX1 ARHGEF28-203ENST00000426542 6118 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
VPS33AQ96AX1 FLT1-201ENST00000282397 7092 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
VPS33AQ96AX1 SYT3-206ENST00000600079 2463 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
VPS33AQ96AX1 ANKRD6-202ENST00000369408 5258 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
VPS33AQ96AX1 LCORL-201ENST00000326877 5604 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
VPS33AQ96AX1 CCNJ-202ENST00000403870 2830 ntTSL 5 BASIC18.4■□□□□ 0.54
VPS33AQ96AX1 SLC25A15-201ENST00000338625 1586 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
VPS33AQ96AX1 RRAS-201ENST00000246792 1044 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
VPS33AQ96AX1 LINC00471-201ENST00000313064 1282 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
VPS33AQ96AX1 AF201337.1-201ENST00000520239 748 ntBASIC18.4■□□□□ 0.54
VPS33AQ96AX1 TPD52L1-207ENST00000527711 999 ntTSL 2 BASIC18.4■□□□□ 0.54
VPS33AQ96AX1 TRIM2-212ENST00000632856 656 ntTSL 3 BASIC18.4■□□□□ 0.54
VPS33AQ96AX1 HOXD10-201ENST00000249501 1989 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
VPS33AQ96AX1 WT1-AS-205ENST00000494911 1320 ntTSL 4 BASIC18.4■□□□□ 0.54
VPS33AQ96AX1 ATXN7L2-202ENST00000369870 2318 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
VPS33AQ96AX1 AC126773.2-201ENST00000562172 1682 ntTSL 3 BASIC18.4■□□□□ 0.54
VPS33AQ96AX1 SLC39A1-209ENST00000537590 2022 ntTSL 2 BASIC18.4■□□□□ 0.54
VPS33AQ96AX1 ESPN-216ENST00000636330 4731 ntAPPRIS ALT2 TSL 5 BASIC18.4■□□□□ 0.54
VPS33AQ96AX1 FRRS1L-201ENST00000561981 8197 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
VPS33AQ96AX1 AUNIP-203ENST00000538789 1392 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
VPS33AQ96AX1 AC018470.1-201ENST00000624790 3129 ntBASIC18.4■□□□□ 0.54
VPS33AQ96AX1 PABPC1L-204ENST00000255136 2129 ntAPPRIS P1 TSL 5 BASIC18.4■□□□□ 0.54
VPS33AQ96AX1 RAPSN-205ENST00000529341 1408 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Retrieved 100 of 98,524 protein–RNA pairs in 41 ms