Protein–RNA interactions for Protein: Q92623

TTC9, Tetratricopeptide repeat protein 9A, humanhuman

Predictions only

Length 222 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TTC9Q92623 PRPF39-201ENST00000355765 2868 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
TTC9Q92623 ARID1B-220ENST00000636930 8246 ntAPPRIS ALT2 TSL 2 BASIC18.26■□□□□ 0.51
TTC9Q92623 PGR-201ENST00000263463 2496 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
TTC9Q92623 SRRM3-204ENST00000611745 3612 ntAPPRIS P1 TSL 5 BASIC18.26■□□□□ 0.51
TTC9Q92623 SOX12-201ENST00000342665 4630 ntAPPRIS P1 BASIC18.26■□□□□ 0.51
TTC9Q92623 TNFSF11-203ENST00000398795 2199 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
TTC9Q92623 PIEZO1-202ENST00000327397 1246 ntTSL 2 BASIC18.26■□□□□ 0.51
TTC9Q92623 HIST1H2APS4-201ENST00000362070 348 ntBASIC18.26■□□□□ 0.51
TTC9Q92623 CD70-202ENST00000423145 881 ntTSL 2 BASIC18.26■□□□□ 0.51
TTC9Q92623 TMEM243-203ENST00000433078 1273 ntAPPRIS P1 TSL 2 BASIC18.26■□□□□ 0.51
TTC9Q92623 AP000777.3-201ENST00000538705 491 ntTSL 3 BASIC18.26■□□□□ 0.51
TTC9Q92623 AC009093.4-201ENST00000567984 561 ntTSL 4 BASIC18.26■□□□□ 0.51
TTC9Q92623 BIRC5-207ENST00000590449 568 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
TTC9Q92623 AC116562.4-202ENST00000641738 218 ntBASIC18.26■□□□□ 0.51
TTC9Q92623 ACSS3-201ENST00000261206 2666 ntAPPRIS ALT1 TSL 1 (best) BASIC18.26■□□□□ 0.51
TTC9Q92623 CSNK1D-203ENST00000392334 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC18.26■□□□□ 0.51
TTC9Q92623 KXD1-202ENST00000539106 1496 ntAPPRIS P1 TSL 3 BASIC18.26■□□□□ 0.51
TTC9Q92623 TSNAXIP1-202ENST00000415766 2338 ntAPPRIS ALT2 TSL 2 BASIC18.26■□□□□ 0.51
TTC9Q92623 OGG1-202ENST00000302008 2191 ntAPPRIS ALT2 TSL 5 BASIC18.25■□□□□ 0.51
TTC9Q92623 CALM2-201ENST00000272298 1302 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
TTC9Q92623 DNASE1L2-201ENST00000320700 1326 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
TTC9Q92623 AC008073.3-201ENST00000610442 2281 ntAPPRIS P1 TSL 2 BASIC18.25■□□□□ 0.51
TTC9Q92623 FAM66B-201ENST00000529456 1432 ntTSL 2 BASIC18.25■□□□□ 0.51
TTC9Q92623 SPNS2-201ENST00000329078 3447 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
TTC9Q92623 TREX2-206ENST00000370232 1864 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
TTC9Q92623 KMT5B-204ENST00000402185 1881 ntTSL 2 BASIC18.25■□□□□ 0.51
TTC9Q92623 RXFP4-201ENST00000368318 1240 ntAPPRIS P1 BASIC18.25■□□□□ 0.51
TTC9Q92623 MADCAM1-203ENST00000382683 603 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
TTC9Q92623 KRTAP5-3-201ENST00000399685 899 ntAPPRIS P1 BASIC18.25■□□□□ 0.51
TTC9Q92623 HDAC11-204ENST00000404040 967 ntTSL 3 BASIC18.25■□□□□ 0.51
TTC9Q92623 AC114763.1-202ENST00000414911 867 ntTSL 3 BASIC18.25■□□□□ 0.51
TTC9Q92623 CCNG1-211ENST00000512163 919 ntTSL 2 BASIC18.25■□□□□ 0.51
TTC9Q92623 C17orf49-208ENST00000552402 760 ntTSL 2 BASIC18.25■□□□□ 0.51
TTC9Q92623 AC116407.4-201ENST00000623319 1061 ntBASIC18.25■□□□□ 0.51
TTC9Q92623 AC011558.1-201ENST00000623459 338 ntBASIC18.25■□□□□ 0.51
TTC9Q92623 CROCCP4-202ENST00000633627 573 ntTSL 3 BASIC18.25■□□□□ 0.51
TTC9Q92623 AKR7A3-201ENST00000361640 1710 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
TTC9Q92623 ZFP69-202ENST00000372706 2871 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
TTC9Q92623 NMRAL1-213ENST00000574733 1719 ntAPPRIS P1 TSL 5 BASIC18.25■□□□□ 0.51
TTC9Q92623 FO681492.1-203ENST00000622861 1362 ntAPPRIS ALT2 TSL 5 BASIC18.25■□□□□ 0.51
TTC9Q92623 GLT8D1-206ENST00000478968 1826 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
TTC9Q92623 TUBGCP3-204ENST00000464139 2461 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
TTC9Q92623 GLT8D1-213ENST00000491606 1577 ntAPPRIS P1 TSL 5 BASIC18.25■□□□□ 0.51
TTC9Q92623 UBAP1-204ENST00000625521 2029 ntTSL 2 BASIC18.25■□□□□ 0.51
TTC9Q92623 RALGPS1-204ENST00000373436 1667 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
TTC9Q92623 EIF2B1-204ENST00000537073 1768 ntTSL 2 BASIC18.25■□□□□ 0.51
TTC9Q92623 FDXR-201ENST00000293195 1875 ntAPPRIS ALT1 TSL 1 (best) BASIC18.24■□□□□ 0.51
TTC9Q92623 CLN3-205ENST00000359984 1876 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
TTC9Q92623 MAEA-208ENST00000505839 1444 ntTSL 2 BASIC18.24■□□□□ 0.51
TTC9Q92623 GRAMD2B-219ENST00000544396 2822 ntTSL 2 BASIC18.24■□□□□ 0.51
TTC9Q92623 NRP2-206ENST00000417189 2386 ntTSL 2 BASIC18.24■□□□□ 0.51
TTC9Q92623 BRICD5-201ENST00000328540 1913 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
TTC9Q92623 SUSD1-203ENST00000374264 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
TTC9Q92623 COX7A1-201ENST00000292907 762 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
TTC9Q92623 CALM3-202ENST00000391918 702 ntTSL 2 BASIC18.24■□□□□ 0.51
TTC9Q92623 UBE2J2-205ENST00000400930 1021 ntTSL 5 BASIC18.24■□□□□ 0.51
TTC9Q92623 LINC01385-201ENST00000512310 780 ntTSL 4 BASIC18.24■□□□□ 0.51
TTC9Q92623 GNB5-211ENST00000560116 918 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
TTC9Q92623 SLC25A1P4-201ENST00000567977 778 ntBASIC18.24■□□□□ 0.51
TTC9Q92623 ELAC2-212ENST00000578071 579 ntTSL 4 BASIC18.24■□□□□ 0.51
TTC9Q92623 AP000692.2-201ENST00000608391 879 ntBASIC18.24■□□□□ 0.51
TTC9Q92623 TRMU-202ENST00000381019 1381 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
TTC9Q92623 ZNF385B-204ENST00000410066 3288 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
TTC9Q92623 KLRG2-201ENST00000340940 2197 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
TTC9Q92623 POLD2-202ENST00000406581 2158 ntAPPRIS P1 TSL 2 BASIC18.24■□□□□ 0.51
TTC9Q92623 NAT6-201ENST00000354862 1330 ntAPPRIS P3 TSL 1 (best) BASIC18.23■□□□□ 0.51
TTC9Q92623 DENND6A-201ENST00000311128 4655 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
TTC9Q92623 STK25-204ENST00000405585 1643 ntTSL 2 BASIC18.23■□□□□ 0.51
TTC9Q92623 LPAR2-203ENST00000586703 1823 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
TTC9Q92623 REM2-201ENST00000267396 1923 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
TTC9Q92623 ACHE-204ENST00000412389 2218 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
TTC9Q92623 BRD4-202ENST00000360016 3240 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
TTC9Q92623 MAST2-201ENST00000361297 5738 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
TTC9Q92623 FGFR1-214ENST00000447712 5900 ntAPPRIS P3 TSL 1 (best) BASIC18.23■□□□□ 0.51
TTC9Q92623 GATAD1-201ENST00000287957 3361 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
TTC9Q92623 CD8A-202ENST00000352580 1977 ntAPPRIS ALT2 TSL 2 BASIC18.23■□□□□ 0.51
TTC9Q92623 PTPN11-202ENST00000392597 1876 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
TTC9Q92623 SMYD2-201ENST00000366957 1671 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
TTC9Q92623 ST7-OT4-201ENST00000397750 1576 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
TTC9Q92623 CRELD2-201ENST00000328268 1357 ntAPPRIS P3 TSL 1 (best) BASIC18.23■□□□□ 0.51
TTC9Q92623 NT5C1A-201ENST00000235628 1107 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
TTC9Q92623 MPG-203ENST00000397817 1039 ntAPPRIS ALT2 TSL 2 BASIC18.23■□□□□ 0.51
TTC9Q92623 MEF2B-202ENST00000409447 1297 ntTSL 3 BASIC18.23■□□□□ 0.51
TTC9Q92623 DNAJC27-AS1-204ENST00000428614 780 ntTSL 3 BASIC18.23■□□□□ 0.51
TTC9Q92623 ELAVL1-202ENST00000593807 856 ntTSL 3 BASIC18.23■□□□□ 0.51
TTC9Q92623 TXNDC12-205ENST00000610127 806 ntTSL 2 BASIC18.23■□□□□ 0.51
TTC9Q92623 AC141257.4-201ENST00000634557 245 ntBASIC18.23■□□□□ 0.51
TTC9Q92623 AC136944.6-201ENST00000634818 245 ntBASIC18.23■□□□□ 0.51
TTC9Q92623 STRBP-201ENST00000348403 3337 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
TTC9Q92623 DNLZ-202ENST00000371739 2934 ntTSL 5 BASIC18.23■□□□□ 0.51
TTC9Q92623 CAPN1-226ENST00000533820 3083 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
TTC9Q92623 HOXB9-201ENST00000311177 2581 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
TTC9Q92623 ILDR2-207ENST00000529071 2566 ntAPPRIS ALT2 TSL 5 BASIC18.23■□□□□ 0.51
TTC9Q92623 CCNO-201ENST00000282572 1433 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
TTC9Q92623 TRAK2-202ENST00000430254 1436 ntTSL 2 BASIC18.23■□□□□ 0.51
TTC9Q92623 AC005332.1-201ENST00000577698 1310 ntBASIC18.23■□□□□ 0.51
TTC9Q92623 SLC44A3-203ENST00000446120 2094 ntTSL 2 BASIC18.22■□□□□ 0.51
TTC9Q92623 YAP1-201ENST00000282441 5386 ntAPPRIS P3 TSL 1 (best) BASIC18.22■□□□□ 0.51
TTC9Q92623 IRF7-205ENST00000397574 1968 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
TTC9Q92623 FUT5-202ENST00000588525 1988 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 32 ms