Protein–RNA interactions for Protein: Q8WZA2

RAPGEF4, Rap guanine nucleotide exchange factor 4, humanhuman

Predictions only

Length 1,011 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF4Q8WZA2 ICA1-208ENST00000407906 1615 ntTSL 1 (best) BASIC25.17■■□□□ 1.62
RAPGEF4Q8WZA2 TMEM88-201ENST00000301599 875 ntAPPRIS P1 TSL 1 (best) BASIC25.17■■□□□ 1.62
RAPGEF4Q8WZA2 ZMYM5-203ENST00000382907 1092 ntTSL 1 (best) BASIC25.17■■□□□ 1.62
RAPGEF4Q8WZA2 LINC01063-201ENST00000441644 348 ntTSL 3 BASIC25.17■■□□□ 1.62
RAPGEF4Q8WZA2 AL359747.1-201ENST00000442370 536 ntTSL 2 BASIC25.17■■□□□ 1.62
RAPGEF4Q8WZA2 SPDYE13P-201ENST00000445314 798 ntBASIC25.17■■□□□ 1.62
RAPGEF4Q8WZA2 LINC00599-204ENST00000521242 716 ntTSL 3 BASIC25.17■■□□□ 1.62
RAPGEF4Q8WZA2 IFI27L1-206ENST00000554562 571 ntTSL 3 BASIC25.17■■□□□ 1.62
RAPGEF4Q8WZA2 AC004076.1-201ENST00000596831 664 ntAPPRIS P1 TSL 2 BASIC25.17■■□□□ 1.62
RAPGEF4Q8WZA2 ZFC3H1-206ENST00000548100 1771 ntTSL 1 (best) BASIC25.17■■□□□ 1.62
RAPGEF4Q8WZA2 PCBP3-203ENST00000400308 1911 ntTSL 1 (best) BASIC25.17■■□□□ 1.62
RAPGEF4Q8WZA2 SLC44A3-203ENST00000446120 2094 ntTSL 2 BASIC25.17■■□□□ 1.62
RAPGEF4Q8WZA2 FAM57B-204ENST00000564806 1710 ntTSL 2 BASIC25.17■■□□□ 1.62
RAPGEF4Q8WZA2 AC116565.2-201ENST00000637674 1854 ntTSL 2 BASIC25.17■■□□□ 1.62
RAPGEF4Q8WZA2 RNF113B-201ENST00000267291 1376 ntAPPRIS P1 TSL 1 (best) BASIC25.17■■□□□ 1.62
RAPGEF4Q8WZA2 AL137060.1-201ENST00000618151 2648 ntBASIC25.16■■□□□ 1.62
RAPGEF4Q8WZA2 NFS1-204ENST00000397425 1956 ntTSL 5 BASIC25.16■■□□□ 1.62
RAPGEF4Q8WZA2 NR1H2-202ENST00000411902 1466 ntTSL 1 (best) BASIC25.16■■□□□ 1.62
RAPGEF4Q8WZA2 OGFOD2-205ENST00000454694 1488 ntTSL 1 (best) BASIC25.16■■□□□ 1.62
RAPGEF4Q8WZA2 SPSB3-208ENST00000566339 1784 ntAPPRIS P1 TSL 1 (best) BASIC25.16■■□□□ 1.62
RAPGEF4Q8WZA2 RNF32-207ENST00000405335 1938 ntAPPRIS P1 TSL 5 BASIC25.16■■□□□ 1.62
RAPGEF4Q8WZA2 COPE-201ENST00000262812 1141 ntAPPRIS P1 TSL 1 (best) BASIC25.16■■□□□ 1.62
RAPGEF4Q8WZA2 C20orf196-201ENST00000303142 1154 ntAPPRIS P1 TSL 1 (best) BASIC25.16■■□□□ 1.62
RAPGEF4Q8WZA2 IGDCC4-201ENST00000352385 6508 ntAPPRIS P1 TSL 1 (best) BASIC25.16■■□□□ 1.62
RAPGEF4Q8WZA2 TBC1D7-205ENST00000379307 1084 ntTSL 1 (best) BASIC25.16■■□□□ 1.62
RAPGEF4Q8WZA2 AL162258.2-202ENST00000469931 831 ntTSL 5 BASIC25.16■■□□□ 1.62
RAPGEF4Q8WZA2 MRPL2-208ENST00000489623 570 ntTSL 2 BASIC25.16■■□□□ 1.62
RAPGEF4Q8WZA2 PP7080-204ENST00000510714 601 ntTSL 3 BASIC25.16■■□□□ 1.62
RAPGEF4Q8WZA2 SKP2-208ENST00000546211 1589 ntTSL 5 BASIC25.16■■□□□ 1.62
RAPGEF4Q8WZA2 SEMA6B-202ENST00000586965 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC25.16■■□□□ 1.62
RAPGEF4Q8WZA2 PDCD2L-203ENST00000587065 492 ntTSL 3 BASIC25.16■■□□□ 1.62
RAPGEF4Q8WZA2 SIN3B-209ENST00000596802 2556 ntTSL 1 (best) BASIC25.16■■□□□ 1.62
RAPGEF4Q8WZA2 MXRA8-201ENST00000309212 2273 ntAPPRIS P1 TSL 1 (best) BASIC25.16■■□□□ 1.62
RAPGEF4Q8WZA2 IDH1-205ENST00000446179 2298 ntAPPRIS P1 TSL 1 (best) BASIC25.16■■□□□ 1.62
RAPGEF4Q8WZA2 ABCC5-204ENST00000392579 1848 ntTSL 1 (best) BASIC25.16■■□□□ 1.62
RAPGEF4Q8WZA2 ZBED3-AS1-208ENST00000512001 1668 ntTSL 3 BASIC25.16■■□□□ 1.62
RAPGEF4Q8WZA2 CKMT1A-202ENST00000413453 1911 ntAPPRIS P1 TSL 1 (best) BASIC25.16■■□□□ 1.62
RAPGEF4Q8WZA2 TRIM3-201ENST00000345851 2879 ntAPPRIS P1 TSL 1 (best) BASIC25.15■■□□□ 1.62
RAPGEF4Q8WZA2 TPCN2-205ENST00000542467 2000 ntTSL 2 BASIC25.15■■□□□ 1.62
RAPGEF4Q8WZA2 PTPN11-202ENST00000392597 1876 ntTSL 1 (best) BASIC25.15■■□□□ 1.62
RAPGEF4Q8WZA2 GNB1-210ENST00000615252 3048 ntTSL 5 BASIC25.15■■□□□ 1.62
RAPGEF4Q8WZA2 CHTOP-202ENST00000368687 1094 ntTSL 1 (best) BASIC25.15■■□□□ 1.62
RAPGEF4Q8WZA2 TSPY21P-201ENST00000433481 731 ntBASIC25.15■■□□□ 1.62
RAPGEF4Q8WZA2 ATP5G2P1-201ENST00000433580 426 ntBASIC25.15■■□□□ 1.62
RAPGEF4Q8WZA2 LBX1-AS1-203ENST00000454527 740 ntTSL 5 BASIC25.15■■□□□ 1.62
RAPGEF4Q8WZA2 CCDC106-201ENST00000308964 1546 ntAPPRIS P1 TSL 1 (best) BASIC25.15■■□□□ 1.62
RAPGEF4Q8WZA2 PNKP-224ENST00000631020 1545 ntTSL 5 BASIC25.15■■□□□ 1.62
RAPGEF4Q8WZA2 FMR1-204ENST00000370471 4125 ntTSL 5 BASIC25.15■■□□□ 1.62
RAPGEF4Q8WZA2 ACTG1-201ENST00000331925 1994 ntAPPRIS P1 TSL 1 (best) BASIC25.14■■□□□ 1.62
RAPGEF4Q8WZA2 NRXN2-203ENST00000377551 6373 ntAPPRIS P3 TSL 1 (best) BASIC25.14■■□□□ 1.62
RAPGEF4Q8WZA2 LMNB1-202ENST00000395354 1572 ntTSL 1 (best) BASIC25.14■■□□□ 1.62
RAPGEF4Q8WZA2 UBE2E3-209ENST00000602710 1556 ntAPPRIS P1 TSL 1 (best) BASIC25.14■■□□□ 1.62
RAPGEF4Q8WZA2 AC099778.1-201ENST00000568593 1911 ntBASIC25.14■■□□□ 1.62
RAPGEF4Q8WZA2 OR10H5-201ENST00000308940 1132 ntAPPRIS P1 BASIC25.14■■□□□ 1.62
RAPGEF4Q8WZA2 MUC1-204ENST00000343256 648 ntTSL 1 (best) BASIC25.14■■□□□ 1.62
RAPGEF4Q8WZA2 HBZP1-201ENST00000354915 429 ntBASIC25.14■■□□□ 1.62
RAPGEF4Q8WZA2 CRELD2-204ENST00000407217 1230 ntAPPRIS ALT2 TSL 1 (best) BASIC25.14■■□□□ 1.62
RAPGEF4Q8WZA2 AL162457.2-201ENST00000447909 937 ntTSL 3 BASIC25.14■■□□□ 1.62
RAPGEF4Q8WZA2 C16orf74-203ENST00000602675 744 ntAPPRIS ALT2 TSL 1 (best) BASIC25.14■■□□□ 1.62
RAPGEF4Q8WZA2 C16orf74-206ENST00000602766 832 ntAPPRIS ALT2 TSL 3 BASIC25.14■■□□□ 1.62
RAPGEF4Q8WZA2 RHNO1-204ENST00000489288 1870 ntAPPRIS P3 TSL 1 (best) BASIC25.14■■□□□ 1.61
RAPGEF4Q8WZA2 FAM187A-202ENST00000412523 1748 ntTSL 1 (best) BASIC25.14■■□□□ 1.61
RAPGEF4Q8WZA2 CHTOP-204ENST00000368694 2096 ntAPPRIS P3 TSL 1 (best) BASIC25.14■■□□□ 1.61
RAPGEF4Q8WZA2 YPEL3-202ENST00000398841 1588 ntTSL 1 (best) BASIC25.14■■□□□ 1.61
RAPGEF4Q8WZA2 GPSM1-206ENST00000616132 2270 ntTSL 1 (best) BASIC25.14■■□□□ 1.61
RAPGEF4Q8WZA2 C17orf67-201ENST00000397861 2013 ntAPPRIS P1 TSL 1 (best) BASIC25.13■■□□□ 1.61
RAPGEF4Q8WZA2 EFHC1-206ENST00000635760 2030 ntTSL 5 BASIC25.13■■□□□ 1.61
RAPGEF4Q8WZA2 RAP1GDS1-201ENST00000264572 1686 ntTSL 5 BASIC25.13■■□□□ 1.61
RAPGEF4Q8WZA2 PPP4C-202ENST00000561610 1333 ntAPPRIS P1 TSL 1 (best) BASIC25.13■■□□□ 1.61
RAPGEF4Q8WZA2 RABEPK-202ENST00000373538 1504 ntAPPRIS P1 TSL 1 (best) BASIC25.13■■□□□ 1.61
RAPGEF4Q8WZA2 SLC35A3-208ENST00000638336 2438 ntTSL 1 (best) BASIC25.13■■□□□ 1.61
RAPGEF4Q8WZA2 CYB561D2-201ENST00000232508 1225 ntAPPRIS P1 TSL 1 (best) BASIC25.13■■□□□ 1.61
RAPGEF4Q8WZA2 SDCBP2-203ENST00000381808 1261 ntTSL 1 (best) BASIC25.13■■□□□ 1.61
RAPGEF4Q8WZA2 TNFRSF10C-202ENST00000397703 1242 ntTSL 2 BASIC25.13■■□□□ 1.61
RAPGEF4Q8WZA2 FAM41C-202ENST00000432963 504 ntTSL 2 BASIC25.13■■□□□ 1.61
RAPGEF4Q8WZA2 SNHG7-203ENST00000436596 509 ntTSL 2 BASIC25.13■■□□□ 1.61
RAPGEF4Q8WZA2 RASA4DP-201ENST00000460726 1199 ntBASIC25.13■■□□□ 1.61
RAPGEF4Q8WZA2 CNP-204ENST00000472031 1019 ntTSL 2 BASIC25.13■■□□□ 1.61
RAPGEF4Q8WZA2 AP003396.3-201ENST00000530918 778 ntTSL 5 BASIC25.13■■□□□ 1.61
RAPGEF4Q8WZA2 BCL10-202ENST00000620248 774 ntTSL 5 BASIC25.13■■□□□ 1.61
RAPGEF4Q8WZA2 PTENP1-AS-201ENST00000627688 873 ntTSL 5 BASIC25.13■■□□□ 1.61
RAPGEF4Q8WZA2 MRPL2-202ENST00000388752 1588 ntAPPRIS P1 TSL 1 (best) BASIC25.13■■□□□ 1.61
RAPGEF4Q8WZA2 ABO-203ENST00000611156 1577 ntAPPRIS ALT2 TSL 5 BASIC25.13■■□□□ 1.61
RAPGEF4Q8WZA2 FBXW8-201ENST00000309909 2343 ntAPPRIS P1 TSL 1 (best) BASIC25.13■■□□□ 1.61
RAPGEF4Q8WZA2 TOR1A-201ENST00000351698 2076 ntAPPRIS P1 TSL 1 (best) BASIC25.13■■□□□ 1.61
RAPGEF4Q8WZA2 BCL7A-201ENST00000261822 2581 ntAPPRIS P1 TSL 1 (best) BASIC25.12■■□□□ 1.61
RAPGEF4Q8WZA2 HDHD5-201ENST00000155674 1735 ntAPPRIS P3 TSL 1 (best) BASIC25.12■■□□□ 1.61
RAPGEF4Q8WZA2 UBE2F-201ENST00000272930 2009 ntAPPRIS P1 TSL 1 (best) BASIC25.12■■□□□ 1.61
RAPGEF4Q8WZA2 PDLIM5-205ENST00000380180 2020 ntTSL 1 (best) BASIC25.12■■□□□ 1.61
RAPGEF4Q8WZA2 DECR2-202ENST00000424398 1012 ntTSL 5 BASIC25.12■■□□□ 1.61
RAPGEF4Q8WZA2 AC034232.1-201ENST00000506026 1064 ntBASIC25.12■■□□□ 1.61
RAPGEF4Q8WZA2 TFF3-204ENST00000518498 1109 ntAPPRIS P2 TSL 1 (best) BASIC25.12■■□□□ 1.61
RAPGEF4Q8WZA2 NTF4-201ENST00000593537 932 ntAPPRIS P1 BASIC25.12■■□□□ 1.61
RAPGEF4Q8WZA2 KRT13-208ENST00000587544 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC25.12■■□□□ 1.61
RAPGEF4Q8WZA2 IRF5-202ENST00000357234 1680 ntTSL 1 (best) BASIC25.12■■□□□ 1.61
RAPGEF4Q8WZA2 APLP1-203ENST00000586861 2052 ntTSL 2 BASIC25.12■■□□□ 1.61
RAPGEF4Q8WZA2 SSH1-209ENST00000551165 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC25.12■■□□□ 1.61
RAPGEF4Q8WZA2 TREX2-203ENST00000338525 2116 ntAPPRIS P1 TSL 1 (best) BASIC25.12■■□□□ 1.61
RAPGEF4Q8WZA2 ZNF821-221ENST00000611294 1833 ntTSL 3 BASIC25.12■■□□□ 1.61
RAPGEF4Q8WZA2 FBXW9-203ENST00000587955 1437 ntTSL 1 (best) BASIC25.12■■□□□ 1.61
Retrieved 100 of 98,524 protein–RNA pairs in 28.2 ms