Protein–RNA interactions for Protein: Q8WWY3

PRPF31, U4/U6 small nuclear ribonucleoprotein Prp31, humanhuman

Known RBP Predictions only

Length 499 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF31Q8WWY3 ASRGL1-211ENST00000628829 1161 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
PRPF31Q8WWY3 SLC35A2-217ENST00000635589 1424 ntTSL 2 BASIC21.17■□□□□ 0.98
PRPF31Q8WWY3 C1orf210-202ENST00000523677 1478 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
PRPF31Q8WWY3 ACAA1-201ENST00000301810 1540 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
PRPF31Q8WWY3 GPR139-202ENST00000570682 1613 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
PRPF31Q8WWY3 FAM87B-201ENST00000326734 1947 ntTSL 2 BASIC21.17■□□□□ 0.98
PRPF31Q8WWY3 ASMTL-202ENST00000381333 2035 ntAPPRIS ALT2 TSL 2 BASIC21.17■□□□□ 0.98
PRPF31Q8WWY3 RNF135-205ENST00000535306 2098 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
PRPF31Q8WWY3 CPEB1-214ENST00000617522 2220 ntTSL 5 BASIC21.17■□□□□ 0.98
PRPF31Q8WWY3 ACADVL-203ENST00000356839 2323 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
PRPF31Q8WWY3 GNB1-201ENST00000378609 3132 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
PRPF31Q8WWY3 TEX22-201ENST00000451127 2571 ntAPPRIS P1 TSL 2 BASIC21.16■□□□□ 0.98
PRPF31Q8WWY3 SCUBE1-201ENST00000290460 2258 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
PRPF31Q8WWY3 TMEM189-201ENST00000371650 2222 ntAPPRIS ALT1 TSL 1 (best) BASIC21.16■□□□□ 0.98
PRPF31Q8WWY3 FBXL18-203ENST00000453700 1932 ntAPPRIS ALT2 TSL 1 (best) BASIC21.16■□□□□ 0.98
PRPF31Q8WWY3 PDLIM2-204ENST00000397760 1847 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
PRPF31Q8WWY3 HOXB6-201ENST00000225648 1660 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
PRPF31Q8WWY3 FAM216A-201ENST00000377673 1582 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
PRPF31Q8WWY3 KRT17-205ENST00000540235 1438 ntTSL 5 BASIC21.16■□□□□ 0.98
PRPF31Q8WWY3 CDX1-202ENST00000616154 1343 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
PRPF31Q8WWY3 ICAM4-201ENST00000340992 1176 ntAPPRIS ALT2 TSL 1 (best) BASIC21.16■□□□□ 0.98
PRPF31Q8WWY3 CKS1B-203ENST00000368439 912 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
PRPF31Q8WWY3 AC005521.1-201ENST00000393351 872 ntBASIC21.16■□□□□ 0.98
PRPF31Q8WWY3 TRPT1-203ENST00000394547 865 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
PRPF31Q8WWY3 SLC25A1P2-201ENST00000430693 912 ntBASIC21.16■□□□□ 0.98
PRPF31Q8WWY3 AC098864.1-204ENST00000513752 805 ntTSL 4 BASIC21.16■□□□□ 0.98
PRPF31Q8WWY3 CASKIN1-201ENST00000343516 5759 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
PRPF31Q8WWY3 LACTB-202ENST00000413507 2978 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
PRPF31Q8WWY3 RNF165-205ENST00000588679 2904 ntBASIC21.16■□□□□ 0.98
PRPF31Q8WWY3 SHB-201ENST00000377707 2783 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
PRPF31Q8WWY3 OLFM1-204ENST00000371793 2444 ntAPPRIS P1 TSL 3 BASIC21.16■□□□□ 0.98
PRPF31Q8WWY3 PCDHA13-203ENST00000617769 2427 ntAPPRIS ALT2 BASIC21.16■□□□□ 0.98
PRPF31Q8WWY3 DBNL-217ENST00000468694 2068 ntAPPRIS ALT2 TSL 2 BASIC21.16■□□□□ 0.98
PRPF31Q8WWY3 PCCB-208ENST00000468777 1877 ntAPPRIS ALT2 TSL 3 BASIC21.15■□□□□ 0.98
PRPF31Q8WWY3 TMSB4X-203ENST00000380636 1702 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
PRPF31Q8WWY3 TOR1B-201ENST00000259339 2769 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
PRPF31Q8WWY3 KCTD13-207ENST00000568000 2528 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
PRPF31Q8WWY3 C19orf25-202ENST00000436106 2403 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
PRPF31Q8WWY3 IL17RC-203ENST00000403601 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC21.15■□□□□ 0.98
PRPF31Q8WWY3 RPL7-202ENST00000396465 1308 ntTSL 3 BASIC21.15■□□□□ 0.98
PRPF31Q8WWY3 FENDRR-203ENST00000595886 3095 ntTSL 2 BASIC21.15■□□□□ 0.98
PRPF31Q8WWY3 AC113347.1-201ENST00000413321 391 ntBASIC21.15■□□□□ 0.98
PRPF31Q8WWY3 AP001059.1-201ENST00000442785 523 ntTSL 3 BASIC21.15■□□□□ 0.98
PRPF31Q8WWY3 AL023803.3-201ENST00000615559 522 ntBASIC21.15■□□□□ 0.98
PRPF31Q8WWY3 CLN6-221ENST00000637494 765 ntTSL 5 BASIC21.15■□□□□ 0.98
PRPF31Q8WWY3 DBNL-219ENST00000490734 2004 ntTSL 2 BASIC21.15■□□□□ 0.98
PRPF31Q8WWY3 SPHK1-207ENST00000590959 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC21.15■□□□□ 0.98
PRPF31Q8WWY3 TSG101-201ENST00000251968 1824 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
PRPF31Q8WWY3 LMO4-202ENST00000370544 5405 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
PRPF31Q8WWY3 AL158211.5-201ENST00000623583 2518 ntBASIC21.15■□□□□ 0.98
PRPF31Q8WWY3 SELENOF-207ENST00000611507 1785 ntTSL 5 BASIC21.15■□□□□ 0.98
PRPF31Q8WWY3 HAND2-AS1-237ENST00000616485 2420 ntTSL 2 BASIC21.15■□□□□ 0.98
PRPF31Q8WWY3 SBDS-201ENST00000246868 1631 ntAPPRIS P2 TSL 1 (best) BASIC21.15■□□□□ 0.98
PRPF31Q8WWY3 IGFALS-201ENST00000215539 2116 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
PRPF31Q8WWY3 ETS1-207ENST00000531611 2134 ntTSL 1 (best) BASIC21.14■□□□□ 0.98
PRPF31Q8WWY3 FAM129C-208ENST00000599164 2073 ntAPPRIS ALT2 TSL 2 BASIC21.14■□□□□ 0.98
PRPF31Q8WWY3 DENND6A-201ENST00000311128 4655 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
PRPF31Q8WWY3 SERPINH1-212ENST00000530284 1358 ntTSL 1 (best) BASIC21.14■□□□□ 0.98
PRPF31Q8WWY3 MAP3K11-210ENST00000532507 1812 ntTSL 2 BASIC21.14■□□□□ 0.97
PRPF31Q8WWY3 SMARCD2-212ENST00000613943 2342 ntTSL 5 BASIC21.14■□□□□ 0.97
PRPF31Q8WWY3 PIN1-201ENST00000247970 997 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
PRPF31Q8WWY3 PRDX5-201ENST00000265462 893 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
PRPF31Q8WWY3 BEX3-204ENST00000372645 913 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
PRPF31Q8WWY3 MLLT10-205ENST00000377100 1136 ntTSL 2 BASIC21.14■□□□□ 0.97
PRPF31Q8WWY3 AC128688.1-201ENST00000487626 519 ntBASIC21.14■□□□□ 0.97
PRPF31Q8WWY3 BNIP3L-206ENST00000523515 915 ntTSL 2 BASIC21.14■□□□□ 0.97
PRPF31Q8WWY3 FAM86C2P-201ENST00000525180 435 ntTSL 4 BASIC21.14■□□□□ 0.97
PRPF31Q8WWY3 RAB2A-211ENST00000531289 1058 ntTSL 2 BASIC21.14■□□□□ 0.97
PRPF31Q8WWY3 LY6L-201ENST00000562505 988 ntAPPRIS P1 TSL 5 BASIC21.14■□□□□ 0.97
PRPF31Q8WWY3 RN7SL850P-201ENST00000579959 291 ntBASIC21.14■□□□□ 0.97
PRPF31Q8WWY3 FAM87A-204ENST00000613235 858 ntBASIC21.14■□□□□ 0.97
PRPF31Q8WWY3 AC116562.4-202ENST00000641738 218 ntBASIC21.14■□□□□ 0.97
PRPF31Q8WWY3 RTKN-201ENST00000233330 2220 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
PRPF31Q8WWY3 KTI12-201ENST00000371614 1714 ntAPPRIS P1 BASIC21.14■□□□□ 0.97
PRPF31Q8WWY3 FAM118A-202ENST00000405673 1612 ntTSL 5 BASIC21.14■□□□□ 0.97
PRPF31Q8WWY3 C2CD2-202ENST00000380486 6345 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
PRPF31Q8WWY3 BACE1-204ENST00000445823 1408 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
PRPF31Q8WWY3 AKIP1-207ENST00000529876 1421 ntTSL 2 BASIC21.13■□□□□ 0.97
PRPF31Q8WWY3 LGALS9-202ENST00000313648 1378 ntTSL 3 BASIC21.13■□□□□ 0.97
PRPF31Q8WWY3 DBX1-201ENST00000524983 1380 ntAPPRIS P1 TSL 5 BASIC21.13■□□□□ 0.97
PRPF31Q8WWY3 CD70-201ENST00000245903 913 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
PRPF31Q8WWY3 TERF1P1-201ENST00000311003 1181 ntBASIC21.13■□□□□ 0.97
PRPF31Q8WWY3 HES7-201ENST00000317814 678 ntAPPRIS P3 TSL 1 (best) BASIC21.13■□□□□ 0.97
PRPF31Q8WWY3 KRT17P2-202ENST00000326333 1174 ntTSL 2 BASIC21.13■□□□□ 0.97
PRPF31Q8WWY3 SHBG-203ENST00000416273 1042 ntAPPRIS ALT2 TSL 3 BASIC21.13■□□□□ 0.97
PRPF31Q8WWY3 HMGB3P22-201ENST00000442010 597 ntTSL 2 BASIC21.13■□□□□ 0.97
PRPF31Q8WWY3 CCR12P-201ENST00000446203 998 ntBASIC21.13■□□□□ 0.97
PRPF31Q8WWY3 PRSS44-201ENST00000515154 1146 ntBASIC21.13■□□□□ 0.97
PRPF31Q8WWY3 SHBG-215ENST00000575903 1196 ntTSL 3 BASIC21.13■□□□□ 0.97
PRPF31Q8WWY3 AC092865.7-201ENST00000641832 219 ntBASIC21.13■□□□□ 0.97
PRPF31Q8WWY3 LIMS2-207ENST00000409808 2315 ntAPPRIS ALT1 TSL 5 BASIC21.13■□□□□ 0.97
PRPF31Q8WWY3 BTD-202ENST00000383778 2261 ntAPPRIS ALT2 TSL 2 BASIC21.13■□□□□ 0.97
PRPF31Q8WWY3 FLT1-204ENST00000541932 2969 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
PRPF31Q8WWY3 ALDH7A1-215ENST00000553117 1935 ntTSL 2 BASIC21.13■□□□□ 0.97
PRPF31Q8WWY3 MAFG-AS1-201ENST00000582106 1895 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
PRPF31Q8WWY3 CHRM4-201ENST00000433765 1511 ntAPPRIS P1 BASIC21.13■□□□□ 0.97
PRPF31Q8WWY3 NRXN1-226ENST00000626899 2543 ntTSL 2 BASIC21.13■□□□□ 0.97
PRPF31Q8WWY3 IL6R-208ENST00000622330 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC21.13■□□□□ 0.97
PRPF31Q8WWY3 FAM72B-202ENST00000369390 2396 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
PRPF31Q8WWY3 AC073508.3-201ENST00000619697 1419 ntBASIC21.12■□□□□ 0.97
Retrieved 100 of 98,524 protein–RNA pairs in 73.5 ms