Protein–RNA interactions for Protein: Q8NHU2

CFAP61, Cilia- and flagella-associated protein 61, humanhuman

Predictions only

Length 1,237 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CFAP61Q8NHU2 TH-206ENST00000381178 1910 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
CFAP61Q8NHU2 DOLPP1-203ENST00000406974 2037 ntTSL 2 BASIC19.41■□□□□ 0.7
CFAP61Q8NHU2 AL031658.1-201ENST00000449519 2013 ntTSL 2 BASIC19.41■□□□□ 0.7
CFAP61Q8NHU2 GPRC5B-201ENST00000300571 5213 ntAPPRIS P2 TSL 1 (best) BASIC19.4■□□□□ 0.7
CFAP61Q8NHU2 ZBTB33-201ENST00000326624 5211 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CFAP61Q8NHU2 DNM1-206ENST00000475805 2710 ntAPPRIS ALT1 TSL 2 BASIC19.4■□□□□ 0.7
CFAP61Q8NHU2 ACY1-215ENST00000636358 1684 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CFAP61Q8NHU2 PWWP2AP1-201ENST00000429776 2273 ntBASIC19.4■□□□□ 0.7
CFAP61Q8NHU2 CRACR2B-207ENST00000528542 1792 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
CFAP61Q8NHU2 SMPD4-202ENST00000409031 4896 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CFAP61Q8NHU2 FGFBP3-201ENST00000311575 2545 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CFAP61Q8NHU2 EP300-AS1-201ENST00000420537 457 ntTSL 3 BASIC19.4■□□□□ 0.7
CFAP61Q8NHU2 DNAJC27-AS1-204ENST00000428614 780 ntTSL 3 BASIC19.4■□□□□ 0.7
CFAP61Q8NHU2 AC027451.1-201ENST00000530667 553 ntTSL 4 BASIC19.4■□□□□ 0.7
CFAP61Q8NHU2 AC005410.1-201ENST00000579522 462 ntTSL 3 BASIC19.4■□□□□ 0.7
CFAP61Q8NHU2 CIRBP-213ENST00000587323 1092 ntTSL 5 BASIC19.4■□□□□ 0.7
CFAP61Q8NHU2 ZNF846-205ENST00000588267 1943 ntTSL 2 BASIC19.4■□□□□ 0.7
CFAP61Q8NHU2 MYEOV-202ENST00000441339 1996 ntAPPRIS P3 TSL 2 BASIC19.4■□□□□ 0.7
CFAP61Q8NHU2 BEST4-201ENST00000372207 2047 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CFAP61Q8NHU2 ZNF668-202ENST00000394983 2717 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
CFAP61Q8NHU2 STX6-201ENST00000258301 4851 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CFAP61Q8NHU2 NCAN-201ENST00000252575 6387 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CFAP61Q8NHU2 AC107464.1-203ENST00000468356 2120 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
CFAP61Q8NHU2 RREB1-201ENST00000334984 5789 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
CFAP61Q8NHU2 IGFBP4-201ENST00000269593 2200 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CFAP61Q8NHU2 DDX42-202ENST00000389924 3939 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
CFAP61Q8NHU2 NADK-201ENST00000341426 3235 ntAPPRIS P3 TSL 2 BASIC19.4■□□□□ 0.7
CFAP61Q8NHU2 PHGDH-210ENST00000641115 1638 ntBASIC19.4■□□□□ 0.7
CFAP61Q8NHU2 AC007613.1-201ENST00000572811 2597 ntBASIC19.39■□□□□ 0.7
CFAP61Q8NHU2 NR1H2-210ENST00000598168 1915 ntAPPRIS ALT2 TSL 5 BASIC19.39■□□□□ 0.7
CFAP61Q8NHU2 TLE4-205ENST00000376544 4871 ntTSL 1 (best) BASIC19.39■□□□□ 0.7
CFAP61Q8NHU2 EPOR-208ENST00000592375 2086 ntTSL 2 BASIC19.39■□□□□ 0.69
CFAP61Q8NHU2 ALDOA-212ENST00000564546 2104 ntAPPRIS P2 TSL 1 (best) BASIC19.39■□□□□ 0.69
CFAP61Q8NHU2 AL032819.2-201ENST00000624543 2162 ntBASIC19.39■□□□□ 0.69
CFAP61Q8NHU2 MAFK-201ENST00000343242 3368 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
CFAP61Q8NHU2 SPRED3-201ENST00000338502 4778 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
CFAP61Q8NHU2 LRRC25-201ENST00000339007 2415 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
CFAP61Q8NHU2 TMEM206-201ENST00000261455 2475 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
CFAP61Q8NHU2 NUTM2F-202ENST00000341207 2516 ntAPPRIS ALT2 TSL 5 BASIC19.39■□□□□ 0.69
CFAP61Q8NHU2 NUTM2G-202ENST00000372322 2516 ntAPPRIS ALT2 TSL 5 BASIC19.39■□□□□ 0.69
CFAP61Q8NHU2 RGCC-201ENST00000379359 960 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
CFAP61Q8NHU2 MCHR1-202ENST00000381433 1219 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
CFAP61Q8NHU2 ESRRAP1-201ENST00000400596 1257 ntBASIC19.39■□□□□ 0.69
CFAP61Q8NHU2 ZNF688-205ENST00000563707 244 ntTSL 3 BASIC19.39■□□□□ 0.69
CFAP61Q8NHU2 PRR7-202ENST00000502922 1345 ntAPPRIS P1 TSL 2 BASIC19.39■□□□□ 0.69
CFAP61Q8NHU2 LRRC29-209ENST00000629962 1303 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.69
CFAP61Q8NHU2 RAB4A-205ENST00000618010 2799 ntTSL 3 BASIC19.39■□□□□ 0.69
CFAP61Q8NHU2 FAM213B-205ENST00000444521 2827 ntAPPRIS ALT2 TSL 2 BASIC19.39■□□□□ 0.69
CFAP61Q8NHU2 TMEM53-205ENST00000372244 1472 ntTSL 2 BASIC19.39■□□□□ 0.69
CFAP61Q8NHU2 FBXW11-202ENST00000296933 4539 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
CFAP61Q8NHU2 SMG5-201ENST00000361813 4559 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
CFAP61Q8NHU2 ZNF302-215ENST00000627982 1723 ntAPPRIS ALT2 TSL 5 BASIC19.39■□□□□ 0.69
CFAP61Q8NHU2 SSR1-204ENST00000474597 1808 ntTSL 5 BASIC19.39■□□□□ 0.69
CFAP61Q8NHU2 TFCP2-204ENST00000548115 1862 ntTSL 5 BASIC19.39■□□□□ 0.69
CFAP61Q8NHU2 FOXI1-201ENST00000306268 1990 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
CFAP61Q8NHU2 AC011511.1-201ENST00000452032 1956 ntAPPRIS P1 TSL 2 BASIC19.39■□□□□ 0.69
CFAP61Q8NHU2 TOR1A-201ENST00000351698 2076 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
CFAP61Q8NHU2 ANXA8L1-201ENST00000584982 2174 ntTSL 2 BASIC19.39■□□□□ 0.69
CFAP61Q8NHU2 TM9SF1-206ENST00000528669 2425 ntTSL 5 BASIC19.39■□□□□ 0.69
CFAP61Q8NHU2 KIF22-203ENST00000561482 2505 ntTSL 2 BASIC19.39■□□□□ 0.69
CFAP61Q8NHU2 GLB1-201ENST00000307363 2616 ntAPPRIS P4 TSL 1 (best) BASIC19.38■□□□□ 0.69
CFAP61Q8NHU2 HNRNPUL1-203ENST00000378215 2864 ntTSL 2 BASIC19.38■□□□□ 0.69
CFAP61Q8NHU2 SNX27-203ENST00000368843 7197 ntAPPRIS P3 TSL 1 (best) BASIC19.38■□□□□ 0.69
CFAP61Q8NHU2 MORC4-201ENST00000255495 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
CFAP61Q8NHU2 ZBTB4-201ENST00000311403 5956 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
CFAP61Q8NHU2 PTGER3-203ENST00000354608 1470 ntAPPRIS ALT2 TSL 5 BASIC19.38■□□□□ 0.69
CFAP61Q8NHU2 NRM-203ENST00000376421 1734 ntAPPRIS P2 TSL 1 (best) BASIC19.38■□□□□ 0.69
CFAP61Q8NHU2 PCDHA4-201ENST00000378125 2328 ntTSL 5 BASIC19.38■□□□□ 0.69
CFAP61Q8NHU2 CD99-203ENST00000381184 918 ntAPPRIS ALT2 TSL 5 BASIC19.38■□□□□ 0.69
CFAP61Q8NHU2 MRGPRE-201ENST00000389832 1409 ntAPPRIS P1 TSL 2 BASIC19.38■□□□□ 0.69
CFAP61Q8NHU2 CALM3-202ENST00000391918 702 ntTSL 2 BASIC19.38■□□□□ 0.69
CFAP61Q8NHU2 GPR135-201ENST00000395116 4578 ntAPPRIS P1 BASIC19.38■□□□□ 0.69
CFAP61Q8NHU2 RAB34-204ENST00000395245 1766 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
CFAP61Q8NHU2 SLC37A2-203ENST00000403796 2910 ntAPPRIS ALT1 TSL 2 BASIC19.38■□□□□ 0.69
CFAP61Q8NHU2 BLOC1S3-201ENST00000433642 2601 ntAPPRIS P1 TSL 2 BASIC19.38■□□□□ 0.69
CFAP61Q8NHU2 DBNL-207ENST00000440166 1415 ntTSL 2 BASIC19.38■□□□□ 0.69
CFAP61Q8NHU2 ST3GAL4-205ENST00000449406 1669 ntTSL 5 BASIC19.38■□□□□ 0.69
CFAP61Q8NHU2 LCN6-203ENST00000476567 1015 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
CFAP61Q8NHU2 TMEM9-209ENST00000485839 938 ntAPPRIS P3 TSL 2 BASIC19.38■□□□□ 0.69
CFAP61Q8NHU2 AC026366.1-201ENST00000488803 879 ntBASIC19.38■□□□□ 0.69
CFAP61Q8NHU2 TADA2B-204ENST00000512388 1343 ntTSL 5 BASIC19.38■□□□□ 0.69
CFAP61Q8NHU2 SCARA5-203ENST00000518030 1074 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
CFAP61Q8NHU2 CCDC17-209ENST00000528266 2181 ntAPPRIS P3 TSL 2 BASIC19.38■□□□□ 0.69
CFAP61Q8NHU2 MMAB-206ENST00000540016 945 ntTSL 3 BASIC19.38■□□□□ 0.69
CFAP61Q8NHU2 AK4-208ENST00000546702 1335 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
CFAP61Q8NHU2 GOLGA2P11-201ENST00000562660 1621 ntBASIC19.38■□□□□ 0.69
CFAP61Q8NHU2 AC009093.4-201ENST00000567984 561 ntTSL 4 BASIC19.38■□□□□ 0.69
CFAP61Q8NHU2 AC008403.3-201ENST00000598924 454 ntBASIC19.38■□□□□ 0.69
CFAP61Q8NHU2 C17orf50-201ENST00000603305 569 ntTSL 3 BASIC19.38■□□□□ 0.69
CFAP61Q8NHU2 C17orf50-203ENST00000605587 1018 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
CFAP61Q8NHU2 DACT2-204ENST00000610183 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
CFAP61Q8NHU2 PRR36-202ENST00000618550 4456 ntAPPRIS P2 TSL 5 BASIC19.38■□□□□ 0.69
CFAP61Q8NHU2 NBL1-212ENST00000621723 2133 ntAPPRIS P3 TSL 2 BASIC19.38■□□□□ 0.69
CFAP61Q8NHU2 RAB11FIP2-201ENST00000355624 6061 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
CFAP61Q8NHU2 KLHL31-201ENST00000370905 5743 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
CFAP61Q8NHU2 CLUH-201ENST00000435359 5224 ntAPPRIS P2 TSL 5 BASIC19.38■□□□□ 0.69
CFAP61Q8NHU2 KRT15-203ENST00000393976 2394 ntAPPRIS P1 TSL 5 BASIC19.37■□□□□ 0.69
CFAP61Q8NHU2 HCK-207ENST00000520553 2101 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
CFAP61Q8NHU2 PPP2R2B-203ENST00000394411 2071 ntAPPRIS P1 TSL 2 BASIC19.37■□□□□ 0.69
CFAP61Q8NHU2 IRF7-203ENST00000397566 2051 ntAPPRIS P4 TSL 1 (best) BASIC19.37■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 36.9 ms