Protein–RNA interactions for Protein: Q8NFW1

COL22A1, Collagen alpha-1(XXII) chain, humanhuman

Predicted RBP Predictions only

Length 1,626 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL22A1Q8NFW1 FAM220CP-201ENST00000395253 831 ntBASIC25.68■■□□□ 1.7
COL22A1Q8NFW1 AL365226.1-201ENST00000448363 349 ntTSL 2 BASIC25.68■■□□□ 1.7
COL22A1Q8NFW1 ZNF688-207ENST00000567855 540 ntTSL 2 BASIC25.68■■□□□ 1.7
COL22A1Q8NFW1 AC107896.1-201ENST00000593212 548 ntTSL 4 BASIC25.68■■□□□ 1.7
COL22A1Q8NFW1 RABAC1-210ENST00000601891 628 ntTSL 3 BASIC25.68■■□□□ 1.7
COL22A1Q8NFW1 MCRIP2-211ENST00000629534 341 ntTSL 2 BASIC25.68■■□□□ 1.7
COL22A1Q8NFW1 DNAAF3-201ENST00000391720 2169 ntAPPRIS P3 TSL 2 BASIC25.68■■□□□ 1.7
COL22A1Q8NFW1 MFSD10-202ENST00000355443 1753 ntAPPRIS P1 TSL 1 (best) BASIC25.68■■□□□ 1.7
COL22A1Q8NFW1 OSR1-201ENST00000272223 1936 ntAPPRIS P1 TSL 1 (best) BASIC25.68■■□□□ 1.7
COL22A1Q8NFW1 SMARCD2-201ENST00000225742 1800 ntTSL 1 (best) BASIC25.68■■□□□ 1.7
COL22A1Q8NFW1 CFP-201ENST00000247153 1713 ntAPPRIS P2 TSL 5 BASIC25.67■■□□□ 1.7
COL22A1Q8NFW1 SRP9-203ENST00000366839 1596 ntTSL 1 (best) BASIC25.67■■□□□ 1.7
COL22A1Q8NFW1 CXorf40B-205ENST00000462691 1440 ntAPPRIS ALT1 TSL 3 BASIC25.67■■□□□ 1.7
COL22A1Q8NFW1 CKLF-202ENST00000345436 571 ntAPPRIS ALT2 TSL 1 (best) BASIC25.67■■□□□ 1.7
COL22A1Q8NFW1 ISG15-201ENST00000379389 711 ntAPPRIS P2 TSL 1 (best) BASIC25.67■■□□□ 1.7
COL22A1Q8NFW1 RFXANK-202ENST00000392324 1059 ntTSL 1 (best) BASIC25.67■■□□□ 1.7
COL22A1Q8NFW1 IGHV3-47-201ENST00000425060 335 ntBASIC25.67■■□□□ 1.7
COL22A1Q8NFW1 AP006621.3-203ENST00000525941 610 ntTSL 2 BASIC25.67■■□□□ 1.7
COL22A1Q8NFW1 AF238378.1-201ENST00000526806 358 ntBASIC25.67■■□□□ 1.7
COL22A1Q8NFW1 LIMD2-211ENST00000583211 1298 ntTSL 3 BASIC25.67■■□□□ 1.7
COL22A1Q8NFW1 AL162497.1-201ENST00000615635 518 ntTSL 4 BASIC25.67■■□□□ 1.7
COL22A1Q8NFW1 EPS8L1-205ENST00000586329 2130 ntTSL 5 BASIC25.67■■□□□ 1.7
COL22A1Q8NFW1 SCT-201ENST00000176195 366 ntAPPRIS P1 TSL 1 (best) BASIC25.66■■□□□ 1.7
COL22A1Q8NFW1 SIT1-201ENST00000259608 1231 ntAPPRIS P2 TSL 1 (best) BASIC25.66■■□□□ 1.7
COL22A1Q8NFW1 NDUFB9-201ENST00000276689 711 ntAPPRIS P1 TSL 1 (best) BASIC25.66■■□□□ 1.7
COL22A1Q8NFW1 VKORC1-205ENST00000394975 1012 ntAPPRIS P1 TSL 1 (best) BASIC25.66■■□□□ 1.7
COL22A1Q8NFW1 LBX1-AS1-204ENST00000456391 421 ntTSL 5 BASIC25.66■■□□□ 1.7
COL22A1Q8NFW1 AC092865.5-201ENST00000545435 363 ntBASIC25.66■■□□□ 1.7
COL22A1Q8NFW1 IKBKG-206ENST00000594239 2299 ntAPPRIS P3 TSL 1 (best) BASIC25.66■■□□□ 1.7
COL22A1Q8NFW1 PER3-203ENST00000377541 1524 ntTSL 1 (best) BASIC25.66■■□□□ 1.7
COL22A1Q8NFW1 GTF2IRD2B-208ENST00000619142 1932 ntTSL 1 (best) BASIC25.66■■□□□ 1.7
COL22A1Q8NFW1 CHMP4A-201ENST00000347519 1393 ntTSL 1 (best) BASIC25.66■■□□□ 1.7
COL22A1Q8NFW1 KCNK4-205ENST00000538767 1389 ntTSL 2 BASIC25.66■■□□□ 1.7
COL22A1Q8NFW1 LMNB1-202ENST00000395354 1572 ntTSL 1 (best) BASIC25.66■■□□□ 1.7
COL22A1Q8NFW1 CCDC189-206ENST00000543610 1967 ntAPPRIS P1 TSL 1 (best) BASIC25.66■■□□□ 1.7
COL22A1Q8NFW1 ACTR1B-201ENST00000289228 2243 ntAPPRIS P1 TSL 1 (best) BASIC25.66■■□□□ 1.7
COL22A1Q8NFW1 LIMS2-202ENST00000355119 2045 ntAPPRIS ALT1 TSL 1 (best) BASIC25.66■■□□□ 1.7
COL22A1Q8NFW1 IRF3-202ENST00000377135 1442 ntTSL 1 (best) BASIC25.66■■□□□ 1.7
COL22A1Q8NFW1 PHACTR3-202ENST00000359926 2252 ntTSL 2 BASIC25.66■■□□□ 1.7
COL22A1Q8NFW1 VIPR2-202ENST00000377633 1491 ntTSL 2 BASIC25.66■■□□□ 1.7
COL22A1Q8NFW1 GMPPA-213ENST00000622191 1473 ntTSL 5 BASIC25.66■■□□□ 1.7
COL22A1Q8NFW1 TPM1-203ENST00000317516 738 ntTSL 1 (best) BASIC25.66■■□□□ 1.7
COL22A1Q8NFW1 CDV3-207ENST00000508481 661 ntTSL 3 BASIC25.66■■□□□ 1.7
COL22A1Q8NFW1 TPM1-218ENST00000559281 851 ntTSL 5 BASIC25.66■■□□□ 1.7
COL22A1Q8NFW1 AC027796.4-201ENST00000575741 874 ntTSL 5 BASIC25.66■■□□□ 1.7
COL22A1Q8NFW1 AC243773.2-203ENST00000612281 640 ntTSL 3 BASIC25.66■■□□□ 1.7
COL22A1Q8NFW1 RABEPK-202ENST00000373538 1504 ntAPPRIS P1 TSL 1 (best) BASIC25.66■■□□□ 1.7
COL22A1Q8NFW1 PLIN2-201ENST00000276914 1972 ntAPPRIS P1 TSL 1 (best) BASIC25.66■■□□□ 1.7
COL22A1Q8NFW1 SCRN2-202ENST00000407215 1779 ntTSL 1 (best) BASIC25.65■■□□□ 1.7
COL22A1Q8NFW1 TINAGL1-211ENST00000537531 1841 ntAPPRIS ALT2 TSL 5 BASIC25.65■■□□□ 1.7
COL22A1Q8NFW1 Z83836.1-201ENST00000624605 1642 ntBASIC25.65■■□□□ 1.7
COL22A1Q8NFW1 DBN1-210ENST00000512501 1878 ntTSL 3 BASIC25.65■■□□□ 1.7
COL22A1Q8NFW1 GABRG3-206ENST00000555083 1405 ntTSL 2 BASIC25.65■■□□□ 1.7
COL22A1Q8NFW1 CD164L2-202ENST00000374027 1457 ntAPPRIS P3 TSL 1 (best) BASIC25.65■■□□□ 1.7
COL22A1Q8NFW1 C1orf210-202ENST00000523677 1478 ntAPPRIS P1 TSL 1 (best) BASIC25.65■■□□□ 1.7
COL22A1Q8NFW1 ATP5G2-201ENST00000338662 1792 ntTSL 2 BASIC25.65■■□□□ 1.7
COL22A1Q8NFW1 BDKRB1-202ENST00000553356 1526 ntTSL 1 (best) BASIC25.65■■□□□ 1.7
COL22A1Q8NFW1 GAS7-210ENST00000579158 1528 ntTSL 1 (best) BASIC25.65■■□□□ 1.7
COL22A1Q8NFW1 AC034213.1-201ENST00000507681 806 ntTSL 3 BASIC25.65■■□□□ 1.7
COL22A1Q8NFW1 AL162171.1-201ENST00000556328 718 ntTSL 3 BASIC25.65■■□□□ 1.7
COL22A1Q8NFW1 AC036176.1-201ENST00000589905 785 ntTSL 2 BASIC25.65■■□□□ 1.7
COL22A1Q8NFW1 IGHV3OR16-7-201ENST00000604106 360 ntBASIC25.65■■□□□ 1.7
COL22A1Q8NFW1 H2BFWT-202ENST00000611083 528 ntAPPRIS P1 TSL 1 (best) BASIC25.65■■□□□ 1.7
COL22A1Q8NFW1 LIN28B-AS1-205ENST00000637414 879 ntTSL 5 BASIC25.65■■□□□ 1.7
COL22A1Q8NFW1 PTPN11-207ENST00000639857 801 ntTSL 5 BASIC25.65■■□□□ 1.7
COL22A1Q8NFW1 ST7-OT4-201ENST00000397750 1576 ntTSL 1 (best) BASIC25.65■■□□□ 1.7
COL22A1Q8NFW1 FIZ1-201ENST00000221665 2660 ntAPPRIS P1 TSL 1 (best) BASIC25.65■■□□□ 1.7
COL22A1Q8NFW1 AC243591.1-201ENST00000452967 1364 ntBASIC25.65■■□□□ 1.7
COL22A1Q8NFW1 CREG1-201ENST00000370509 1974 ntAPPRIS P1 TSL 1 (best) BASIC25.65■■□□□ 1.7
COL22A1Q8NFW1 EPM2A-209ENST00000638262 2679 ntTSL 1 (best) BASIC25.64■■□□□ 1.7
COL22A1Q8NFW1 SPON2-203ENST00000431380 1802 ntAPPRIS P1 TSL 5 BASIC25.64■■□□□ 1.7
COL22A1Q8NFW1 ERCC2-205ENST00000485403 1538 ntTSL 1 (best) BASIC25.64■■□□□ 1.7
COL22A1Q8NFW1 PARK7-201ENST00000338639 949 ntAPPRIS P1 TSL 1 (best) BASIC25.64■■□□□ 1.7
COL22A1Q8NFW1 FICD-205ENST00000552758 603 ntTSL 2 BASIC25.64■■□□□ 1.7
COL22A1Q8NFW1 GSTZ1-218ENST00000557053 580 ntTSL 3 BASIC25.64■■□□□ 1.7
COL22A1Q8NFW1 TEN1-204ENST00000588202 862 ntTSL 3 BASIC25.64■■□□□ 1.7
COL22A1Q8NFW1 CTU2-210ENST00000567949 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC25.64■■□□□ 1.7
COL22A1Q8NFW1 FEZF1-203ENST00000442488 2099 ntAPPRIS P1 TSL 1 (best) BASIC25.64■■□□□ 1.69
COL22A1Q8NFW1 NAE1-201ENST00000290810 1837 ntAPPRIS P1 TSL 1 (best) BASIC25.64■■□□□ 1.69
COL22A1Q8NFW1 CYB561-204ENST00000448884 1496 ntTSL 2 BASIC25.64■■□□□ 1.69
COL22A1Q8NFW1 RPRD1A-201ENST00000357384 1850 ntAPPRIS P1 TSL 5 BASIC25.64■■□□□ 1.69
COL22A1Q8NFW1 ANKRD18DP-204ENST00000455355 1975 ntBASIC25.64■■□□□ 1.69
COL22A1Q8NFW1 NAB1-202ENST00000409581 2360 ntAPPRIS P3 TSL 2 BASIC25.64■■□□□ 1.69
COL22A1Q8NFW1 DFFB-203ENST00000341385 572 ntTSL 5 BASIC25.63■■□□□ 1.69
COL22A1Q8NFW1 AC021188.1-201ENST00000421534 740 ntTSL 3 BASIC25.63■■□□□ 1.69
COL22A1Q8NFW1 BOC-211ENST00000484034 1286 ntTSL 1 (best) BASIC25.63■■□□□ 1.69
COL22A1Q8NFW1 MRPL21-208ENST00000567045 932 ntTSL 2 BASIC25.63■■□□□ 1.69
COL22A1Q8NFW1 BORCS8-206ENST00000585679 801 ntTSL 3 BASIC25.63■■□□□ 1.69
COL22A1Q8NFW1 Z69720.1-201ENST00000601483 472 ntBASIC25.63■■□□□ 1.69
COL22A1Q8NFW1 ABCC5-204ENST00000392579 1848 ntTSL 1 (best) BASIC25.63■■□□□ 1.69
COL22A1Q8NFW1 LAT-204ENST00000395461 1448 ntAPPRIS ALT2 TSL 1 (best) BASIC25.63■■□□□ 1.69
COL22A1Q8NFW1 ATAD3A-203ENST00000378756 2492 ntAPPRIS P1 TSL 1 (best) BASIC25.63■■□□□ 1.69
COL22A1Q8NFW1 SLC38A11-203ENST00000409149 1621 ntAPPRIS P2 TSL 2 BASIC25.63■■□□□ 1.69
COL22A1Q8NFW1 BRD9-202ENST00000467963 2156 ntAPPRIS P1 TSL 2 BASIC25.63■■□□□ 1.69
COL22A1Q8NFW1 IL11RA-201ENST00000318041 1728 ntAPPRIS P1 TSL 1 (best) BASIC25.63■■□□□ 1.69
COL22A1Q8NFW1 UGP2-201ENST00000337130 2338 ntAPPRIS P2 TSL 1 (best) BASIC25.63■■□□□ 1.69
COL22A1Q8NFW1 ID2-202ENST00000331129 623 ntAPPRIS P1 TSL 1 (best) BASIC25.63■■□□□ 1.69
COL22A1Q8NFW1 AL023284.2-201ENST00000405850 579 ntBASIC25.63■■□□□ 1.69
COL22A1Q8NFW1 PITPNA-AS1-201ENST00000425081 542 ntTSL 2 BASIC25.63■■□□□ 1.69
COL22A1Q8NFW1 POLR2M-203ENST00000464277 910 ntTSL 1 (best) BASIC25.63■■□□□ 1.69
Retrieved 100 of 98,524 protein–RNA pairs in 29.4 ms