Protein–RNA interactions for Protein: Q8NE35

CPEB3, Cytoplasmic polyadenylation element-binding protein 3, humanhuman

Known RBP Predictions only

Length 698 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPEB3Q8NE35 PRR14-203ENST00000542965 2316 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CPEB3Q8NE35 SGO1-209ENST00000442720 2266 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
CPEB3Q8NE35 FBXL16-203ENST00000562563 2257 ntTSL 2 BASIC16.8■□□□□ 0.28
CPEB3Q8NE35 NAT6-204ENST00000443094 1464 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
CPEB3Q8NE35 MAN1A1-201ENST00000368468 5014 ntAPPRIS P1 TSL 2 BASIC16.79■□□□□ 0.28
CPEB3Q8NE35 RBM45-201ENST00000286070 1785 ntAPPRIS P2 TSL 1 (best) BASIC16.79■□□□□ 0.28
CPEB3Q8NE35 BRAF-201ENST00000288602 2480 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CPEB3Q8NE35 TRAPPC12-202ENST00000382110 2483 ntAPPRIS P2 TSL 2 BASIC16.79■□□□□ 0.28
CPEB3Q8NE35 CRMP1-201ENST00000324989 3146 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
CPEB3Q8NE35 DBNL-219ENST00000490734 2004 ntTSL 2 BASIC16.79■□□□□ 0.28
CPEB3Q8NE35 RPL7-202ENST00000396465 1308 ntTSL 3 BASIC16.79■□□□□ 0.28
CPEB3Q8NE35 STXBP6-203ENST00000419632 1970 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CPEB3Q8NE35 P3H4-202ENST00000393928 2601 ntAPPRIS P2 TSL 1 (best) BASIC16.79■□□□□ 0.28
CPEB3Q8NE35 ZNF281-202ENST00000367352 2933 ntAPPRIS ALT2 TSL 2 BASIC16.79■□□□□ 0.28
CPEB3Q8NE35 ANKRD10-202ENST00000310847 1193 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
CPEB3Q8NE35 MIR718-201ENST00000390190 70 ntBASIC16.79■□□□□ 0.28
CPEB3Q8NE35 PHYHD1-207ENST00000421063 1182 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
CPEB3Q8NE35 CCDC124-201ENST00000445755 938 ntAPPRIS P1 TSL 2 BASIC16.79■□□□□ 0.28
CPEB3Q8NE35 RBCK1-213ENST00000475269 1200 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
CPEB3Q8NE35 BAALC-AS1-207ENST00000522856 594 ntTSL 3 BASIC16.79■□□□□ 0.28
CPEB3Q8NE35 AL359399.1-201ENST00000557610 462 ntTSL 3 BASIC16.79■□□□□ 0.28
CPEB3Q8NE35 AC027682.2-201ENST00000563083 336 ntTSL 5 BASIC16.79■□□□□ 0.28
CPEB3Q8NE35 USP36-216ENST00000589424 970 ntTSL 5 BASIC16.79■□□□□ 0.28
CPEB3Q8NE35 CCDC124-203ENST00000597436 1055 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CPEB3Q8NE35 AL445675.2-201ENST00000620291 557 ntBASIC16.79■□□□□ 0.28
CPEB3Q8NE35 AC004816.2-201ENST00000622856 284 ntTSL 5 BASIC16.79■□□□□ 0.28
CPEB3Q8NE35 AC004706.3-201ENST00000634558 1009 ntTSL 5 BASIC16.79■□□□□ 0.28
CPEB3Q8NE35 SLC22A18-202ENST00000347936 1542 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CPEB3Q8NE35 AL390860.1-201ENST00000449298 1541 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
CPEB3Q8NE35 PDLIM2-204ENST00000397760 1847 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CPEB3Q8NE35 DISC1-202ENST00000317586 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
CPEB3Q8NE35 SOX15-201ENST00000250055 1396 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CPEB3Q8NE35 PPFIA1-201ENST00000253925 5234 ntAPPRIS P4 TSL 1 (best) BASIC16.78■□□□□ 0.28
CPEB3Q8NE35 BHLHE22-201ENST00000321870 3262 ntAPPRIS P1 BASIC16.78■□□□□ 0.28
CPEB3Q8NE35 ANXA8L1-201ENST00000584982 2174 ntTSL 2 BASIC16.78■□□□□ 0.28
CPEB3Q8NE35 CASTOR1-202ENST00000407689 1623 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CPEB3Q8NE35 DDAH2-211ENST00000375787 1330 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
CPEB3Q8NE35 LRRC1-202ENST00000370888 3180 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CPEB3Q8NE35 NOM1-201ENST00000275820 6077 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CPEB3Q8NE35 TSG101-201ENST00000251968 1824 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CPEB3Q8NE35 GOLGA3-203ENST00000456883 5496 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
CPEB3Q8NE35 SHANK1-202ENST00000359082 6459 ntTSL 5 BASIC16.78■□□□□ 0.28
CPEB3Q8NE35 ZNF346-201ENST00000358149 2314 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CPEB3Q8NE35 C1QBP-201ENST00000225698 1169 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CPEB3Q8NE35 NDUFB10-201ENST00000268668 705 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CPEB3Q8NE35 CLDND2-201ENST00000291715 974 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CPEB3Q8NE35 LYPD1-201ENST00000345008 1033 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
CPEB3Q8NE35 DUSP15-205ENST00000398084 1256 ntTSL 5 BASIC16.78■□□□□ 0.28
CPEB3Q8NE35 KSR1P1-201ENST00000446298 240 ntBASIC16.78■□□□□ 0.28
CPEB3Q8NE35 TNFRSF1B-204ENST00000536782 557 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
CPEB3Q8NE35 AC089999.2-201ENST00000552525 248 ntTSL 3 BASIC16.78■□□□□ 0.28
CPEB3Q8NE35 EFTUD1P1-201ENST00000558187 596 ntTSL 4 BASIC16.78■□□□□ 0.28
CPEB3Q8NE35 TUBA8-201ENST00000316027 1518 ntTSL 2 BASIC16.78■□□□□ 0.28
CPEB3Q8NE35 SMARCD1-201ENST00000381513 3237 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
CPEB3Q8NE35 GTPBP3-222ENST00000600625 2493 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
CPEB3Q8NE35 ZBTB4-201ENST00000311403 5956 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CPEB3Q8NE35 PIK3R1-201ENST00000320694 2625 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
CPEB3Q8NE35 AL135905.2-201ENST00000584934 1404 ntBASIC16.78■□□□□ 0.28
CPEB3Q8NE35 CCDC151-201ENST00000356392 2107 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CPEB3Q8NE35 MARC2-202ENST00000366913 2134 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CPEB3Q8NE35 ABHD13-201ENST00000375898 5338 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
CPEB3Q8NE35 OBSL1-203ENST00000373876 5503 ntTSL 5 BASIC16.77■□□□□ 0.28
CPEB3Q8NE35 GTF3A-201ENST00000381140 1383 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
CPEB3Q8NE35 MRM3-201ENST00000304478 1809 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
CPEB3Q8NE35 MCUR1-201ENST00000379170 5471 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
CPEB3Q8NE35 STOML1-209ENST00000564777 1849 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
CPEB3Q8NE35 STMN3-201ENST00000370053 2255 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
CPEB3Q8NE35 UBTF-203ENST00000393606 2683 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
CPEB3Q8NE35 FOXN3-214ENST00000557258 2692 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.28
CPEB3Q8NE35 KCNMA1-278ENST00000640141 5705 ntAPPRIS ALT2 TSL 5 BASIC16.77■□□□□ 0.28
CPEB3Q8NE35 DNAL4-201ENST00000216068 1504 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
CPEB3Q8NE35 USP48-201ENST00000308271 4595 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
CPEB3Q8NE35 PRELID3A-201ENST00000336990 1715 ntAPPRIS P1 TSL 2 BASIC16.77■□□□□ 0.28
CPEB3Q8NE35 PRELID3A-202ENST00000440960 1716 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
CPEB3Q8NE35 GABRD-205ENST00000638771 1707 ntAPPRIS ALT2 TSL 3 BASIC16.77■□□□□ 0.28
CPEB3Q8NE35 TBX21-201ENST00000177694 2572 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
CPEB3Q8NE35 HCN2-201ENST00000251287 3408 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
CPEB3Q8NE35 NECAB3-202ENST00000375238 1942 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
CPEB3Q8NE35 UPK3B-203ENST00000394849 1041 ntAPPRIS ALT2 TSL 2 BASIC16.77■□□□□ 0.28
CPEB3Q8NE35 RPS2P55-201ENST00000397318 883 ntBASIC16.77■□□□□ 0.28
CPEB3Q8NE35 SAPCD2P4-201ENST00000424595 1171 ntBASIC16.77■□□□□ 0.28
CPEB3Q8NE35 AC137630.1-201ENST00000452042 782 ntTSL 4 BASIC16.77■□□□□ 0.28
CPEB3Q8NE35 LRRC75A-AS1-205ENST00000475953 1201 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
CPEB3Q8NE35 AC107956.1-201ENST00000494359 873 ntBASIC16.77■□□□□ 0.28
CPEB3Q8NE35 RPS15-203ENST00000586096 570 ntTSL 2 BASIC16.77■□□□□ 0.28
CPEB3Q8NE35 Z99916.2-201ENST00000604037 246 ntBASIC16.77■□□□□ 0.28
CPEB3Q8NE35 AC073195.1-201ENST00000607241 877 ntBASIC16.77■□□□□ 0.28
CPEB3Q8NE35 CR392000.1-201ENST00000624770 1228 ntBASIC16.77■□□□□ 0.28
CPEB3Q8NE35 FBLN7-202ENST00000331203 2301 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
CPEB3Q8NE35 BST1-201ENST00000265016 1480 ntAPPRIS P2 TSL 1 (best) BASIC16.77■□□□□ 0.28
CPEB3Q8NE35 TEX21P-204ENST00000641479 1693 ntBASIC16.77■□□□□ 0.28
CPEB3Q8NE35 CORO1B-201ENST00000341356 1881 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
CPEB3Q8NE35 DOC2A-201ENST00000350119 2071 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
CPEB3Q8NE35 ZNF582-207ENST00000619584 2297 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
CPEB3Q8NE35 AP003356.1-202ENST00000517910 2770 ntTSL 2 BASIC16.77■□□□□ 0.27
CPEB3Q8NE35 ZNF843-203ENST00000618063 1765 ntAPPRIS P2 TSL 1 (best) BASIC16.77■□□□□ 0.27
CPEB3Q8NE35 UBE2Q2-204ENST00000561851 1582 ntTSL 2 BASIC16.77■□□□□ 0.27
CPEB3Q8NE35 OTOP2-201ENST00000331427 2147 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.27
CPEB3Q8NE35 NPAS1-201ENST00000439365 1341 ntTSL 2 BASIC16.76■□□□□ 0.27
CPEB3Q8NE35 CEP85L-205ENST00000419517 2079 ntAPPRIS P3 TSL 1 (best) BASIC16.76■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 42.5 ms