Protein–RNA interactions for Protein: Q8NCS4

TMEM35B, Transmembrane protein 35B, humanhuman

Predictions only

Length 154 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM35BQ8NCS4 CACNA1A-257ENST00000638009 8665 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.84
TMEM35BQ8NCS4 KRT16-201ENST00000301653 1644 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
TMEM35BQ8NCS4 UBTF-202ENST00000343638 4684 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
TMEM35BQ8NCS4 TUBA3FP-202ENST00000422086 1974 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
TMEM35BQ8NCS4 YBX3-201ENST00000228251 1796 ntAPPRIS P3 TSL 1 (best) BASIC20.33■□□□□ 0.84
TMEM35BQ8NCS4 AC007192.1-201ENST00000593731 5142 ntAPPRIS P1 TSL 2 BASIC20.33■□□□□ 0.84
TMEM35BQ8NCS4 AC087289.5-201ENST00000586076 3175 ntBASIC20.33■□□□□ 0.84
TMEM35BQ8NCS4 ATPAF2-206ENST00000474627 1564 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
TMEM35BQ8NCS4 TPD52-211ENST00000519303 1594 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
TMEM35BQ8NCS4 AC005906.2-207ENST00000639005 1580 ntTSL 5 BASIC20.33■□□□□ 0.84
TMEM35BQ8NCS4 ATF5-201ENST00000423777 2069 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
TMEM35BQ8NCS4 VWA8-AS1-201ENST00000611103 2079 ntTSL 2 BASIC20.33■□□□□ 0.84
TMEM35BQ8NCS4 EDA-208ENST00000524573 1381 ntAPPRIS ALT1 TSL 1 (best) BASIC20.33■□□□□ 0.84
TMEM35BQ8NCS4 MLST8-232ENST00000569417 1870 ntAPPRIS P3 TSL 1 (best) BASIC20.33■□□□□ 0.84
TMEM35BQ8NCS4 OTOP3-201ENST00000328801 2363 ntAPPRIS P1 TSL 2 BASIC20.32■□□□□ 0.84
TMEM35BQ8NCS4 C20orf27-201ENST00000217195 1302 ntTSL 2 BASIC20.32■□□□□ 0.84
TMEM35BQ8NCS4 TRIM7-205ENST00000422067 1954 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
TMEM35BQ8NCS4 TMEM191A-208ENST00000450925 1961 ntTSL 2 BASIC20.32■□□□□ 0.84
TMEM35BQ8NCS4 SIX5-203ENST00000560168 1975 ntTSL 4 BASIC20.32■□□□□ 0.84
TMEM35BQ8NCS4 ULK3-217ENST00000568667 1470 ntTSL 5 BASIC20.32■□□□□ 0.84
TMEM35BQ8NCS4 IL6R-208ENST00000622330 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
TMEM35BQ8NCS4 FXYD6-211ENST00000539526 2132 ntAPPRIS P2 TSL 1 (best) BASIC20.32■□□□□ 0.84
TMEM35BQ8NCS4 C15orf56-202ENST00000623360 2129 ntTSL 2 BASIC20.32■□□□□ 0.84
TMEM35BQ8NCS4 HOXA11-201ENST00000006015 2295 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
TMEM35BQ8NCS4 PDCD10-201ENST00000392750 2067 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
TMEM35BQ8NCS4 CTAG2-201ENST00000247306 993 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
TMEM35BQ8NCS4 MRPL15-201ENST00000260102 1147 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
TMEM35BQ8NCS4 TSPY21P-201ENST00000433481 731 ntBASIC20.32■□□□□ 0.84
TMEM35BQ8NCS4 GCSHP5-201ENST00000443090 522 ntBASIC20.32■□□□□ 0.84
TMEM35BQ8NCS4 ABCC5-211ENST00000446941 883 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
TMEM35BQ8NCS4 RPS2P4-201ENST00000476944 856 ntBASIC20.32■□□□□ 0.84
TMEM35BQ8NCS4 CERNA3-201ENST00000521403 557 ntTSL 3 BASIC20.32■□□□□ 0.84
TMEM35BQ8NCS4 CNOT8-224ENST00000523698 862 ntTSL 2 BASIC20.32■□□□□ 0.84
TMEM35BQ8NCS4 AP003501.2-201ENST00000524433 477 ntTSL 4 BASIC20.32■□□□□ 0.84
TMEM35BQ8NCS4 AC091564.5-201ENST00000526456 820 ntTSL 4 BASIC20.32■□□□□ 0.84
TMEM35BQ8NCS4 GRAMD1B-209ENST00000533341 707 ntTSL 2 BASIC20.32■□□□□ 0.84
TMEM35BQ8NCS4 TMEM72-203ENST00000544540 1018 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
TMEM35BQ8NCS4 AF186192.3-201ENST00000583427 947 ntBASIC20.32■□□□□ 0.84
TMEM35BQ8NCS4 AC004816.2-201ENST00000622856 284 ntTSL 5 BASIC20.32■□□□□ 0.84
TMEM35BQ8NCS4 UBL4A-202ENST00000369660 2382 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
TMEM35BQ8NCS4 RHOT2-201ENST00000315082 2539 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
TMEM35BQ8NCS4 C5orf47-201ENST00000340147 2522 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
TMEM35BQ8NCS4 TFDP2-202ENST00000467072 1853 ntAPPRIS P3 TSL 1 (best) BASIC20.32■□□□□ 0.84
TMEM35BQ8NCS4 SMOC2-206ENST00000535039 1875 ntTSL 5 BASIC20.32■□□□□ 0.84
TMEM35BQ8NCS4 SCARB1-201ENST00000261693 2611 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
TMEM35BQ8NCS4 ADORA2A-215ENST00000618076 2630 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
TMEM35BQ8NCS4 GTF3A-201ENST00000381140 1383 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
TMEM35BQ8NCS4 ANKRD29-201ENST00000322980 1658 ntTSL 2 BASIC20.32■□□□□ 0.84
TMEM35BQ8NCS4 SPHK2-211ENST00000600537 2136 ntAPPRIS ALT2 TSL 2 BASIC20.32■□□□□ 0.84
TMEM35BQ8NCS4 LPCAT3-201ENST00000261407 2268 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
TMEM35BQ8NCS4 ATIC-205ENST00000435675 2275 ntTSL 2 BASIC20.32■□□□□ 0.84
TMEM35BQ8NCS4 PCDHGB3-202ENST00000618934 2445 ntAPPRIS P1 BASIC20.32■□□□□ 0.84
TMEM35BQ8NCS4 SLC27A3-214ENST00000624995 2413 ntAPPRIS P2 TSL 1 (best) BASIC20.32■□□□□ 0.84
TMEM35BQ8NCS4 DRD5-201ENST00000304374 2330 ntAPPRIS P1 BASIC20.31■□□□□ 0.84
TMEM35BQ8NCS4 AC098818.2-201ENST00000564925 2320 ntBASIC20.31■□□□□ 0.84
TMEM35BQ8NCS4 AL691447.2-201ENST00000454869 2162 ntTSL 2 BASIC20.31■□□□□ 0.84
TMEM35BQ8NCS4 RRS1-201ENST00000320270 1706 ntAPPRIS P1 BASIC20.31■□□□□ 0.84
TMEM35BQ8NCS4 BIK-201ENST00000216115 953 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
TMEM35BQ8NCS4 SPSB1-203ENST00000377399 1007 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
TMEM35BQ8NCS4 FAM86C1-203ENST00000426628 952 ntAPPRIS ALT2 TSL 2 BASIC20.31■□□□□ 0.84
TMEM35BQ8NCS4 AL158047.1-201ENST00000445918 881 ntBASIC20.31■□□□□ 0.84
TMEM35BQ8NCS4 AL590666.2-201ENST00000448869 758 ntTSL 2 BASIC20.31■□□□□ 0.84
TMEM35BQ8NCS4 KCNMA1-220ENST00000481070 896 ntTSL 2 BASIC20.31■□□□□ 0.84
TMEM35BQ8NCS4 Z85996.1-201ENST00000494644 937 ntBASIC20.31■□□□□ 0.84
TMEM35BQ8NCS4 GLRB-205ENST00000512619 728 ntTSL 3 BASIC20.31■□□□□ 0.84
TMEM35BQ8NCS4 AC090877.2-202ENST00000560363 574 ntTSL 2 BASIC20.31■□□□□ 0.84
TMEM35BQ8NCS4 CDIPT-204ENST00000563415 1047 ntTSL 3 BASIC20.31■□□□□ 0.84
TMEM35BQ8NCS4 FLT3LG-211ENST00000600429 984 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
TMEM35BQ8NCS4 BX649632.1-201ENST00000610187 819 ntTSL 3 BASIC20.31■□□□□ 0.84
TMEM35BQ8NCS4 LINC01586-201ENST00000506090 1840 ntTSL 2 BASIC20.31■□□□□ 0.84
TMEM35BQ8NCS4 C21orf58-205ENST00000397683 1674 ntAPPRIS ALT2 TSL 2 BASIC20.31■□□□□ 0.84
TMEM35BQ8NCS4 C2orf81-201ENST00000290390 2227 ntAPPRIS P5 TSL 5 BASIC20.31■□□□□ 0.84
TMEM35BQ8NCS4 KRT8P41-201ENST00000533985 1514 ntBASIC20.31■□□□□ 0.84
TMEM35BQ8NCS4 SYNDIG1L-201ENST00000331628 2607 ntAPPRIS P1 TSL 5 BASIC20.31■□□□□ 0.84
TMEM35BQ8NCS4 ERCC2-203ENST00000391944 2334 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
TMEM35BQ8NCS4 FAM228A-201ENST00000295150 1774 ntAPPRIS P2 TSL 1 (best) BASIC20.31■□□□□ 0.84
TMEM35BQ8NCS4 ITPKB-202ENST00000366784 3146 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
TMEM35BQ8NCS4 E4F1-201ENST00000301727 2573 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
TMEM35BQ8NCS4 HOXB9-201ENST00000311177 2581 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
TMEM35BQ8NCS4 LGALS12-203ENST00000394618 1618 ntAPPRIS P3 TSL 1 (best) BASIC20.31■□□□□ 0.84
TMEM35BQ8NCS4 MBIP-203ENST00000416007 1648 ntAPPRIS P3 TSL 1 (best) BASIC20.31■□□□□ 0.84
TMEM35BQ8NCS4 AMDHD2-201ENST00000293971 1459 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
TMEM35BQ8NCS4 ZXDB-201ENST00000374888 5894 ntAPPRIS P1 BASIC20.3■□□□□ 0.84
TMEM35BQ8NCS4 ZMAT3-203ENST00000432729 2944 ntAPPRIS ALT1 TSL 2 BASIC20.3■□□□□ 0.84
TMEM35BQ8NCS4 NHLH2-201ENST00000320238 2512 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
TMEM35BQ8NCS4 ERLIN2-202ENST00000335171 1742 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
TMEM35BQ8NCS4 LINC00511-201ENST00000453722 1716 ntTSL 2 BASIC20.3■□□□□ 0.84
TMEM35BQ8NCS4 AC013268.5-201ENST00000454928 1959 ntTSL 2 BASIC20.3■□□□□ 0.84
TMEM35BQ8NCS4 FP475955.4-201ENST00000623131 1990 ntBASIC20.3■□□□□ 0.84
TMEM35BQ8NCS4 TBXA2R-201ENST00000375190 2608 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
TMEM35BQ8NCS4 IRX1P1-201ENST00000438849 1838 ntBASIC20.3■□□□□ 0.84
TMEM35BQ8NCS4 SMPD3-203ENST00000563226 2093 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
TMEM35BQ8NCS4 GPR142-201ENST00000335666 1437 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
TMEM35BQ8NCS4 AL135905.2-201ENST00000584934 1404 ntBASIC20.3■□□□□ 0.84
TMEM35BQ8NCS4 PNKP-207ENST00000596014 1665 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
TMEM35BQ8NCS4 ADORA2A-201ENST00000337539 2569 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
TMEM35BQ8NCS4 PEX7-202ENST00000367756 680 ntTSL 3 BASIC20.3■□□□□ 0.84
TMEM35BQ8NCS4 SEC61A2-206ENST00000379051 707 ntTSL 3 BASIC20.3■□□□□ 0.84
TMEM35BQ8NCS4 AVP-201ENST00000380293 619 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
TMEM35BQ8NCS4 AC004980.1-204ENST00000429707 299 ntBASIC20.3■□□□□ 0.84
Retrieved 100 of 98,524 protein–RNA pairs in 21.2 ms