Protein–RNA interactions for Protein: Q8NCN4

RNF169, E3 ubiquitin-protein ligase RNF169, humanhuman

Predictions only

Length 708 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF169Q8NCN4 AL353719.1-201ENST00000566847 864 ntBASIC20.88■□□□□ 0.93
RNF169Q8NCN4 LINC01238-205ENST00000567549 1107 ntBASIC20.88■□□□□ 0.93
RNF169Q8NCN4 ULK4P3-205ENST00000568486 1158 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
RNF169Q8NCN4 DCTN5-208ENST00000568589 772 ntTSL 2 BASIC20.88■□□□□ 0.93
RNF169Q8NCN4 RNF165-205ENST00000588679 2904 ntBASIC20.88■□□□□ 0.93
RNF169Q8NCN4 SSH3-202ENST00000308298 2046 ntTSL 2 BASIC20.88■□□□□ 0.93
RNF169Q8NCN4 TMEM109-202ENST00000536171 1959 ntAPPRIS P1 TSL 2 BASIC20.88■□□□□ 0.93
RNF169Q8NCN4 SERGEF-201ENST00000265965 1566 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
RNF169Q8NCN4 CYP46A1-202ENST00000380228 1597 ntTSL 2 BASIC20.88■□□□□ 0.93
RNF169Q8NCN4 SLC9A6-202ENST00000370698 4631 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
RNF169Q8NCN4 ZGPAT-203ENST00000357119 1896 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
RNF169Q8NCN4 KIAA0895L-206ENST00000563902 2233 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
RNF169Q8NCN4 CYB561-204ENST00000448884 1496 ntTSL 2 BASIC20.88■□□□□ 0.93
RNF169Q8NCN4 TXNRD3-205ENST00000640797 1824 ntAPPRIS ALT2 TSL 2 BASIC20.88■□□□□ 0.93
RNF169Q8NCN4 ANKRD13D-216ENST00000514166 2138 ntTSL 2 BASIC20.87■□□□□ 0.93
RNF169Q8NCN4 SSH1-209ENST00000551165 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
RNF169Q8NCN4 KANK3-203ENST00000593649 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
RNF169Q8NCN4 ANKRD18DP-204ENST00000455355 1975 ntBASIC20.87■□□□□ 0.93
RNF169Q8NCN4 GLB1-201ENST00000307363 2616 ntAPPRIS P4 TSL 1 (best) BASIC20.87■□□□□ 0.93
RNF169Q8NCN4 DOK3-201ENST00000312943 2292 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
RNF169Q8NCN4 TRPV6-209ENST00000638686 2298 ntAPPRIS P2 TSL 1 (best) BASIC20.87■□□□□ 0.93
RNF169Q8NCN4 SYTL1-201ENST00000318074 1900 ntTSL 2 BASIC20.87■□□□□ 0.93
RNF169Q8NCN4 PCBP3-203ENST00000400308 1911 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
RNF169Q8NCN4 CD2AP-201ENST00000359314 5412 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
RNF169Q8NCN4 RNF152P1-201ENST00000397754 604 ntBASIC20.87■□□□□ 0.93
RNF169Q8NCN4 HDAC11-AS1-201ENST00000424112 515 ntTSL 2 BASIC20.87■□□□□ 0.93
RNF169Q8NCN4 BX890604.1-205ENST00000425492 856 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
RNF169Q8NCN4 AC012618.3-202ENST00000440004 472 ntTSL 4 BASIC20.87■□□□□ 0.93
RNF169Q8NCN4 AC092647.4-201ENST00000457211 535 ntBASIC20.87■□□□□ 0.93
RNF169Q8NCN4 COX11P1-201ENST00000489116 835 ntBASIC20.87■□□□□ 0.93
RNF169Q8NCN4 AC063952.2-201ENST00000498792 1227 ntBASIC20.87■□□□□ 0.93
RNF169Q8NCN4 C12orf76-204ENST00000547573 607 ntTSL 3 BASIC20.87■□□□□ 0.93
RNF169Q8NCN4 AC141257.4-201ENST00000634557 245 ntBASIC20.87■□□□□ 0.93
RNF169Q8NCN4 AC136944.6-201ENST00000634818 245 ntBASIC20.87■□□□□ 0.93
RNF169Q8NCN4 ADCY5-202ENST00000462833 7311 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
RNF169Q8NCN4 RAB5A-201ENST00000273047 2536 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
RNF169Q8NCN4 AC008060.1-201ENST00000401499 1551 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
RNF169Q8NCN4 SUSD1-204ENST00000374270 3124 ntAPPRIS P3 TSL 1 (best) BASIC20.87■□□□□ 0.93
RNF169Q8NCN4 PTPN11-202ENST00000392597 1876 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
RNF169Q8NCN4 ZNF282-204ENST00000610704 3722 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
RNF169Q8NCN4 CHRNB2-205ENST00000637900 2390 ntAPPRIS ALT1 TSL 5 BASIC20.87■□□□□ 0.93
RNF169Q8NCN4 MORF4L2-AS1-201ENST00000435306 2086 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
RNF169Q8NCN4 PDLIM5-205ENST00000380180 2020 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
RNF169Q8NCN4 RPS6KB2-201ENST00000312629 1733 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
RNF169Q8NCN4 PIF1-202ENST00000333425 2278 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
RNF169Q8NCN4 TNFRSF1A-201ENST00000162749 2223 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
RNF169Q8NCN4 DNAAF3-207ENST00000527223 2228 ntAPPRIS ALT2 TSL 2 BASIC20.86■□□□□ 0.93
RNF169Q8NCN4 DLX2-201ENST00000234198 2453 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
RNF169Q8NCN4 TTYH3-201ENST00000258796 4840 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
RNF169Q8NCN4 EIF5A-204ENST00000416016 1336 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
RNF169Q8NCN4 KHDC1-201ENST00000257765 1134 ntAPPRIS P3 TSL 1 (best) BASIC20.86■□□□□ 0.93
RNF169Q8NCN4 BAD-201ENST00000309032 929 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
RNF169Q8NCN4 TBC1D7-201ENST00000343141 1027 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
RNF169Q8NCN4 S100A16-203ENST00000368705 956 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
RNF169Q8NCN4 TIMM17B-201ENST00000376582 950 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
RNF169Q8NCN4 AC007563.2-201ENST00000447289 552 ntTSL 5 BASIC20.86■□□□□ 0.93
RNF169Q8NCN4 PRKCB-209ENST00000498058 480 ntTSL 3 BASIC20.86■□□□□ 0.93
RNF169Q8NCN4 C16orf74-207ENST00000602914 761 ntAPPRIS ALT2 TSL 2 BASIC20.86■□□□□ 0.93
RNF169Q8NCN4 KHDC1-207ENST00000610435 1101 ntAPPRIS P3 TSL 5 BASIC20.86■□□□□ 0.93
RNF169Q8NCN4 CSNK1D-203ENST00000392334 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC20.86■□□□□ 0.93
RNF169Q8NCN4 TBC1D10C-201ENST00000312390 1497 ntTSL 5 BASIC20.86■□□□□ 0.93
RNF169Q8NCN4 WIPF1-203ENST00000392546 2180 ntAPPRIS P2 TSL 5 BASIC20.86■□□□□ 0.93
RNF169Q8NCN4 C6orf89-203ENST00000373685 1400 ntAPPRIS ALT2 TSL 5 BASIC20.86■□□□□ 0.93
RNF169Q8NCN4 TMPO-204ENST00000393053 2374 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
RNF169Q8NCN4 IRX4-208ENST00000622814 2398 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
RNF169Q8NCN4 HDAC4-201ENST00000345617 8976 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
RNF169Q8NCN4 HDAC4-215ENST00000543185 8990 ntTSL 5 BASIC20.86■□□□□ 0.93
RNF169Q8NCN4 MBD3-201ENST00000156825 5518 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
RNF169Q8NCN4 WDR90-201ENST00000293879 5488 ntAPPRIS P2 TSL 5 BASIC20.85■□□□□ 0.93
RNF169Q8NCN4 ACAP3-201ENST00000353662 2280 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
RNF169Q8NCN4 SHANK1-203ENST00000391813 4785 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
RNF169Q8NCN4 ZNF773-204ENST00000598770 2019 ntAPPRIS ALT2 TSL 2 BASIC20.85■□□□□ 0.93
RNF169Q8NCN4 APBB3-203ENST00000357560 2218 ntAPPRIS P3 TSL 5 BASIC20.85■□□□□ 0.93
RNF169Q8NCN4 SCGB3A1-201ENST00000292641 521 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
RNF169Q8NCN4 PIEZO1-202ENST00000327397 1246 ntTSL 2 BASIC20.85■□□□□ 0.93
RNF169Q8NCN4 SPSB1-203ENST00000377399 1007 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
RNF169Q8NCN4 RTBDN-202ENST00000393233 1000 ntAPPRIS ALT2 TSL 3 BASIC20.85■□□□□ 0.93
RNF169Q8NCN4 AC007731.5-201ENST00000429594 644 ntAPPRIS P1 TSL 5 BASIC20.85■□□□□ 0.93
RNF169Q8NCN4 GXYLT1P6-201ENST00000456472 1187 ntBASIC20.85■□□□□ 0.93
RNF169Q8NCN4 AP003041.3-201ENST00000527151 707 ntBASIC20.85■□□□□ 0.93
RNF169Q8NCN4 GEMIN7-203ENST00000591607 848 ntAPPRIS P1 TSL 3 BASIC20.85■□□□□ 0.93
RNF169Q8NCN4 FBXL22-204ENST00000638704 729 ntAPPRIS ALT2 TSL 2 BASIC20.85■□□□□ 0.93
RNF169Q8NCN4 NUDT15-201ENST00000258662 2098 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
RNF169Q8NCN4 CLPB-202ENST00000340729 2071 ntTSL 2 BASIC20.85■□□□□ 0.93
RNF169Q8NCN4 COLEC12-201ENST00000400256 5742 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
RNF169Q8NCN4 KRT8P11-201ENST00000409686 1436 ntBASIC20.85■□□□□ 0.93
RNF169Q8NCN4 SPNS1-203ENST00000334536 2027 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
RNF169Q8NCN4 USP39-204ENST00000409766 2033 ntTSL 2 BASIC20.85■□□□□ 0.93
RNF169Q8NCN4 PNMA8B-202ENST00000599531 5308 ntAPPRIS P1 BASIC20.85■□□□□ 0.93
RNF169Q8NCN4 NAA60-235ENST00000576916 1567 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
RNF169Q8NCN4 LGALS9-202ENST00000313648 1378 ntTSL 3 BASIC20.85■□□□□ 0.93
RNF169Q8NCN4 PRMT1-201ENST00000391851 1393 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
RNF169Q8NCN4 H1FNT-201ENST00000335017 1300 ntAPPRIS P1 BASIC20.84■□□□□ 0.93
RNF169Q8NCN4 HSD11B1L-221ENST00000583928 1319 ntTSL 5 BASIC20.84■□□□□ 0.93
RNF169Q8NCN4 NAT8L-201ENST00000331662 5571 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
RNF169Q8NCN4 GALE-201ENST00000374497 1488 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
RNF169Q8NCN4 AL451069.1-201ENST00000455414 634 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
RNF169Q8NCN4 MOK-234ENST00000524370 1165 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
RNF169Q8NCN4 LTBR-211ENST00000543190 785 ntTSL 3 BASIC20.84■□□□□ 0.93
RNF169Q8NCN4 GCHFR-202ENST00000558467 785 ntTSL 2 BASIC20.84■□□□□ 0.93
Retrieved 100 of 98,524 protein–RNA pairs in 53.5 ms