Protein–RNA interactions for Protein: Q8N5M4

TTC9C, Tetratricopeptide repeat protein 9C, humanhuman

Predictions only

Length 171 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TTC9CQ8N5M4 C19orf66-209ENST00000591813 1481 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
TTC9CQ8N5M4 TSPY8-201ENST00000287721 1161 ntAPPRIS P5 TSL 1 (best) BASIC15.17■□□□□ 0.02
TTC9CQ8N5M4 MAL-201ENST00000309988 1112 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
TTC9CQ8N5M4 MTFP1-202ENST00000355143 891 ntTSL 2 BASIC15.17■□□□□ 0.02
TTC9CQ8N5M4 PUSL1-201ENST00000379031 1287 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
TTC9CQ8N5M4 TSPY10-201ENST00000428845 1161 ntAPPRIS P5 TSL 1 (best) BASIC15.17■□□□□ 0.02
TTC9CQ8N5M4 NELFE-206ENST00000444811 1202 ntAPPRIS ALT2 TSL 2 BASIC15.17■□□□□ 0.02
TTC9CQ8N5M4 TSPY3-203ENST00000457222 1161 ntAPPRIS P5 TSL 1 (best) BASIC15.17■□□□□ 0.02
TTC9CQ8N5M4 SBF2-AS1-202ENST00000499953 854 ntTSL 5 BASIC15.17■□□□□ 0.02
TTC9CQ8N5M4 CYB561-214ENST00000582034 1193 ntTSL 2 BASIC15.17■□□□□ 0.02
TTC9CQ8N5M4 HLA-A-209ENST00000638375 975 ntBASIC15.17■□□□□ 0.02
TTC9CQ8N5M4 MARC2-202ENST00000366913 2134 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
TTC9CQ8N5M4 EVL-202ENST00000402714 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC15.17■□□□□ 0.02
TTC9CQ8N5M4 MEF2B-204ENST00000424583 1405 ntAPPRIS P1 TSL 5 BASIC15.17■□□□□ 0.02
TTC9CQ8N5M4 ISLR2-204ENST00000453268 2812 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
TTC9CQ8N5M4 ANGPTL4-201ENST00000301455 1879 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
TTC9CQ8N5M4 VAV1-210ENST00000602142 2620 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
TTC9CQ8N5M4 PLEKHG5-212ENST00000537245 4794 ntAPPRIS ALT2 TSL 2 BASIC15.16■□□□□ 0.02
TTC9CQ8N5M4 ANKRD53-202ENST00000360589 1666 ntAPPRIS ALT2 TSL 2 BASIC15.16■□□□□ 0.02
TTC9CQ8N5M4 PIANP-201ENST00000320591 2323 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
TTC9CQ8N5M4 PLEKHH3-204ENST00000591022 2983 ntAPPRIS P2 TSL 1 (best) BASIC15.16■□□□□ 0.02
TTC9CQ8N5M4 PSMB11-201ENST00000408907 2110 ntAPPRIS P1 BASIC15.16■□□□□ 0.02
TTC9CQ8N5M4 COL16A1-203ENST00000373672 5736 ntAPPRIS P1 TSL 5 BASIC15.16■□□□□ 0.02
TTC9CQ8N5M4 BCAP29-202ENST00000379117 1946 ntAPPRIS P1 TSL 5 BASIC15.16■□□□□ 0.02
TTC9CQ8N5M4 CEMP1-202ENST00000567119 1374 ntAPPRIS P2 BASIC15.16■□□□□ 0.02
TTC9CQ8N5M4 RNASET2-214ENST00000620173 1391 ntTSL 5 BASIC15.16■□□□□ 0.02
TTC9CQ8N5M4 CHST2-201ENST00000309575 4582 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
TTC9CQ8N5M4 RPP25L-201ENST00000297613 1092 ntAPPRIS P1 TSL 2 BASIC15.16■□□□□ 0.02
TTC9CQ8N5M4 PDZRN3-202ENST00000308537 1136 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
TTC9CQ8N5M4 CHPF-202ENST00000373891 1079 ntTSL 2 BASIC15.16■□□□□ 0.02
TTC9CQ8N5M4 NDUFS6-202ENST00000469176 550 ntTSL 2 BASIC15.16■□□□□ 0.02
TTC9CQ8N5M4 IAH1-215ENST00000497473 1266 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
TTC9CQ8N5M4 SPINK2-202ENST00000504762 659 ntAPPRIS ALT2 TSL 2 BASIC15.16■□□□□ 0.02
TTC9CQ8N5M4 AC091564.2-201ENST00000527191 399 ntTSL 3 BASIC15.16■□□□□ 0.02
TTC9CQ8N5M4 AL160286.2-201ENST00000567150 934 ntBASIC15.16■□□□□ 0.02
TTC9CQ8N5M4 MMD2-204ENST00000612910 778 ntTSL 5 BASIC15.16■□□□□ 0.02
TTC9CQ8N5M4 AC018445.1-201ENST00000621571 568 ntTSL 4 BASIC15.16■□□□□ 0.02
TTC9CQ8N5M4 MTFP1-206ENST00000629597 482 ntTSL 5 BASIC15.16■□□□□ 0.02
TTC9CQ8N5M4 REST-211ENST00000640168 1268 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
TTC9CQ8N5M4 COL13A1-205ENST00000398978 3093 ntAPPRIS P4 TSL 5 BASIC15.16■□□□□ 0.02
TTC9CQ8N5M4 NOP56-201ENST00000329276 2400 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
TTC9CQ8N5M4 AL390860.1-201ENST00000449298 1541 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
TTC9CQ8N5M4 TWF2-203ENST00000499914 1440 ntTSL 5 BASIC15.16■□□□□ 0.02
TTC9CQ8N5M4 GGT6-202ENST00000381550 2145 ntTSL 2 BASIC15.16■□□□□ 0.02
TTC9CQ8N5M4 ITGB7-209ENST00000550743 2138 ntTSL 5 BASIC15.16■□□□□ 0.02
TTC9CQ8N5M4 BRAF-201ENST00000288602 2480 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
TTC9CQ8N5M4 TCIRG1-213ENST00000532635 2457 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
TTC9CQ8N5M4 SLC23A3-201ENST00000295738 2037 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
TTC9CQ8N5M4 UPP1-201ENST00000331803 1932 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
TTC9CQ8N5M4 FAM217A-208ENST00000639338 1929 ntTSL 5 BASIC15.15■□□□□ 0.02
TTC9CQ8N5M4 MFSD10-201ENST00000329687 2173 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
TTC9CQ8N5M4 MRGPRG-AS1-201ENST00000420873 1818 ntTSL 2 BASIC15.15■□□□□ 0.02
TTC9CQ8N5M4 NXNL2-202ENST00000375855 1457 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
TTC9CQ8N5M4 ACVR1B-201ENST00000257963 4563 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
TTC9CQ8N5M4 ASPM-201ENST00000294732 6132 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
TTC9CQ8N5M4 FOXL2-201ENST00000330315 2917 ntAPPRIS P1 BASIC15.15■□□□□ 0.02
TTC9CQ8N5M4 FAM3A-203ENST00000369641 1359 ntTSL 5 BASIC15.15■□□□□ 0.02
TTC9CQ8N5M4 PRKCSH-209ENST00000589838 1898 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
TTC9CQ8N5M4 TM7SF3-201ENST00000343028 2709 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
TTC9CQ8N5M4 MRGPRG-201ENST00000332314 870 ntAPPRIS P1 BASIC15.15■□□□□ 0.02
TTC9CQ8N5M4 PMF1-BGLAP-202ENST00000368276 852 ntTSL 3 BASIC15.15■□□□□ 0.02
TTC9CQ8N5M4 TMEM240-202ENST00000425828 717 ntAPPRIS P1 TSL 2 BASIC15.15■□□□□ 0.02
TTC9CQ8N5M4 C1QBPP2-201ENST00000528754 825 ntBASIC15.15■□□□□ 0.02
TTC9CQ8N5M4 C14orf144-202ENST00000555282 854 ntTSL 3 BASIC15.15■□□□□ 0.02
TTC9CQ8N5M4 RPL23AP53-202ENST00000606507 370 ntTSL 3 BASIC15.15■□□□□ 0.02
TTC9CQ8N5M4 CABP2-204ENST00000636477 941 ntTSL 5 BASIC15.15■□□□□ 0.02
TTC9CQ8N5M4 LTBP4-203ENST00000308370 4948 ntAPPRIS P4 TSL 1 (best) BASIC15.15■□□□□ 0.02
TTC9CQ8N5M4 MRPS2-201ENST00000241600 1510 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
TTC9CQ8N5M4 GLS-202ENST00000338435 4475 ntAPPRIS ALT1 TSL 1 (best) BASIC15.15■□□□□ 0.02
TTC9CQ8N5M4 IMPDH1-214ENST00000496200 2283 ntTSL 2 BASIC15.15■□□□□ 0.02
TTC9CQ8N5M4 PTPA-204ENST00000355007 2515 ntTSL 5 BASIC15.15■□□□□ 0.02
TTC9CQ8N5M4 LINC01465-201ENST00000408887 1940 ntBASIC15.15■□□□□ 0.02
TTC9CQ8N5M4 PDE3B-201ENST00000282096 6076 ntAPPRIS P2 TSL 1 (best) BASIC15.15■□□□□ 0.02
TTC9CQ8N5M4 RAB11FIP5-201ENST00000258098 4342 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
TTC9CQ8N5M4 MAPK8IP1-201ENST00000241014 3050 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
TTC9CQ8N5M4 BRSK1-201ENST00000309383 3079 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
TTC9CQ8N5M4 DCAKD-208ENST00000614054 2054 ntAPPRIS P1 TSL 2 BASIC15.15■□□□□ 0.02
TTC9CQ8N5M4 TSG101-201ENST00000251968 1824 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
TTC9CQ8N5M4 SPON2-203ENST00000431380 1802 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
TTC9CQ8N5M4 DDAH2-211ENST00000375787 1330 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
TTC9CQ8N5M4 DHRS4-204ENST00000543741 1340 ntTSL 2 BASIC15.15■□□□□ 0.02
TTC9CQ8N5M4 CNEP1R1-203ENST00000458059 2965 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
TTC9CQ8N5M4 TMPRSS5-201ENST00000299882 2232 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
TTC9CQ8N5M4 RPS6KB2-201ENST00000312629 1733 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
TTC9CQ8N5M4 YPEL5-205ENST00000402708 1735 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
TTC9CQ8N5M4 LCORL-201ENST00000326877 5604 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
TTC9CQ8N5M4 HOXC6-202ENST00000394331 2943 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
TTC9CQ8N5M4 FNBP1-202ENST00000420781 5410 ntAPPRIS ALT1 TSL 1 (best) BASIC15.14■□□□□ 0.01
TTC9CQ8N5M4 HEBP2-204ENST00000607197 10014 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
TTC9CQ8N5M4 QSOX2-201ENST00000358701 4530 ntAPPRIS P1 TSL 2 BASIC15.14■□□□□ 0.01
TTC9CQ8N5M4 FOXD2-201ENST00000334793 4675 ntAPPRIS P1 BASIC15.14■□□□□ 0.01
TTC9CQ8N5M4 UBE2K-203ENST00000445950 2175 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
TTC9CQ8N5M4 ACTL6B-201ENST00000160382 1537 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
TTC9CQ8N5M4 ADAM33-202ENST00000356518 3677 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
TTC9CQ8N5M4 MEF2B-201ENST00000409224 1683 ntTSL 2 BASIC15.14■□□□□ 0.01
TTC9CQ8N5M4 PSMG1-202ENST00000380900 907 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
TTC9CQ8N5M4 AC110769.1-201ENST00000420161 815 ntTSL 3 BASIC15.14■□□□□ 0.01
TTC9CQ8N5M4 PHYHD1-207ENST00000421063 1182 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
TTC9CQ8N5M4 AC007405.3-201ENST00000429172 561 ntTSL 3 BASIC15.14■□□□□ 0.01
TTC9CQ8N5M4 HOTAIRM1-203ENST00000429611 722 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 23.9 ms