Protein–RNA interactions for Protein: Q8N2C3

DEPDC4, DEP domain-containing protein 4, humanhuman

Predictions only

Length 294 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC4Q8N2C3 AC011611.3-201ENST00000552367 569 ntTSL 4 BASIC17.83■□□□□ 0.44
DEPDC4Q8N2C3 AC090527.2-201ENST00000564080 1060 ntAPPRIS P1 TSL 3 BASIC17.83■□□□□ 0.44
DEPDC4Q8N2C3 ATP6V0E2-211ENST00000606024 893 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
DEPDC4Q8N2C3 PGAM1-201ENST00000334828 1830 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
DEPDC4Q8N2C3 EEPD1-201ENST00000242108 4765 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
DEPDC4Q8N2C3 LINC00461-203ENST00000504246 2300 ntTSL 2 BASIC17.83■□□□□ 0.44
DEPDC4Q8N2C3 GABBR1-202ENST00000376977 1739 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
DEPDC4Q8N2C3 ST3GAL4-203ENST00000392669 1724 ntAPPRIS ALT1 TSL 1 (best) BASIC17.83■□□□□ 0.44
DEPDC4Q8N2C3 COQ10B-201ENST00000263960 2239 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
DEPDC4Q8N2C3 NUP153-202ENST00000537253 6030 ntAPPRIS ALT2 TSL 2 BASIC17.83■□□□□ 0.44
DEPDC4Q8N2C3 RETREG1-201ENST00000306320 3268 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
DEPDC4Q8N2C3 RPUSD2-202ENST00000559271 1558 ntAPPRIS ALT2 TSL 2 BASIC17.83■□□□□ 0.44
DEPDC4Q8N2C3 SOGA3-203ENST00000525778 4077 ntAPPRIS P1 TSL 5 BASIC17.83■□□□□ 0.44
DEPDC4Q8N2C3 PTX4-203ENST00000447419 1516 ntAPPRIS ALT2 TSL 5 BASIC17.82■□□□□ 0.44
DEPDC4Q8N2C3 IL10RB-201ENST00000290200 1963 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
DEPDC4Q8N2C3 GBGT1-208ENST00000540636 1934 ntTSL 2 BASIC17.82■□□□□ 0.44
DEPDC4Q8N2C3 C6orf223-202ENST00000439969 2757 ntTSL 2 BASIC17.82■□□□□ 0.44
DEPDC4Q8N2C3 MFSD10-211ENST00000514800 1776 ntTSL 5 BASIC17.82■□□□□ 0.44
DEPDC4Q8N2C3 CDK5R1-201ENST00000313401 4325 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
DEPDC4Q8N2C3 HNRNPD-201ENST00000313899 3033 ntAPPRIS P4 TSL 1 (best) BASIC17.82■□□□□ 0.44
DEPDC4Q8N2C3 ACAP3-202ENST00000354700 3896 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
DEPDC4Q8N2C3 DLK1-202ENST00000341267 4722 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
DEPDC4Q8N2C3 MZF1-206ENST00000599369 2587 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
DEPDC4Q8N2C3 BHLHA15-201ENST00000314018 706 ntAPPRIS P1 BASIC17.82■□□□□ 0.44
DEPDC4Q8N2C3 ABHD17AP1-201ENST00000358206 933 ntBASIC17.82■□□□□ 0.44
DEPDC4Q8N2C3 GGT6-202ENST00000381550 2145 ntTSL 2 BASIC17.82■□□□□ 0.44
DEPDC4Q8N2C3 RHEB-204ENST00000472642 900 ntTSL 3 BASIC17.82■□□□□ 0.44
DEPDC4Q8N2C3 AC006252.1-201ENST00000483834 1101 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
DEPDC4Q8N2C3 RNA5SP413-201ENST00000516373 109 ntBASIC17.82■□□□□ 0.44
DEPDC4Q8N2C3 C19orf25-207ENST00000588871 2128 ntTSL 5 BASIC17.82■□□□□ 0.44
DEPDC4Q8N2C3 JOSD2-205ENST00000601423 802 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
DEPDC4Q8N2C3 BHLHA15-202ENST00000609256 796 ntAPPRIS P1 TSL 3 BASIC17.82■□□□□ 0.44
DEPDC4Q8N2C3 TBCB-214ENST00000629269 413 ntTSL 5 BASIC17.82■□□□□ 0.44
DEPDC4Q8N2C3 UBXN2B-206ENST00000638450 591 ntTSL 5 BASIC17.82■□□□□ 0.44
DEPDC4Q8N2C3 CD55-203ENST00000367063 1691 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
DEPDC4Q8N2C3 CEP85L-205ENST00000419517 2079 ntAPPRIS P3 TSL 1 (best) BASIC17.82■□□□□ 0.44
DEPDC4Q8N2C3 TXNRD2-202ENST00000400518 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
DEPDC4Q8N2C3 HSPA8-202ENST00000453788 2004 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
DEPDC4Q8N2C3 CABIN1-202ENST00000337989 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
DEPDC4Q8N2C3 C5orf17-202ENST00000512559 1984 ntTSL 2 BASIC17.82■□□□□ 0.44
DEPDC4Q8N2C3 CBLC-201ENST00000270279 1579 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
DEPDC4Q8N2C3 LMNB1-202ENST00000395354 1572 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
DEPDC4Q8N2C3 LANCL3-201ENST00000378619 3063 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
DEPDC4Q8N2C3 CCT4-204ENST00000544079 2261 ntTSL 2 BASIC17.82■□□□□ 0.44
DEPDC4Q8N2C3 CORO1B-201ENST00000341356 1881 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
DEPDC4Q8N2C3 NFATC4-220ENST00000555393 2235 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
DEPDC4Q8N2C3 ING5-201ENST00000313552 5196 ntAPPRIS P3 TSL 1 (best) BASIC17.82■□□□□ 0.44
DEPDC4Q8N2C3 ZNF771-202ENST00000434417 1454 ntAPPRIS P1 TSL 2 BASIC17.82■□□□□ 0.44
DEPDC4Q8N2C3 AC008764.1-201ENST00000409035 2567 ntAPPRIS P1 TSL 2 BASIC17.82■□□□□ 0.44
DEPDC4Q8N2C3 TAF6-211ENST00000453269 2464 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
DEPDC4Q8N2C3 RPS6KA1-203ENST00000374166 3131 ntTSL 5 BASIC17.81■□□□□ 0.44
DEPDC4Q8N2C3 SLCO4A1-201ENST00000217159 2776 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
DEPDC4Q8N2C3 SOCS2-207ENST00000549206 2072 ntAPPRIS P1 TSL 3 BASIC17.81■□□□□ 0.44
DEPDC4Q8N2C3 AC006333.2-201ENST00000607957 2099 ntBASIC17.81■□□□□ 0.44
DEPDC4Q8N2C3 STMN3-202ENST00000540534 2351 ntTSL 2 BASIC17.81■□□□□ 0.44
DEPDC4Q8N2C3 SLC23A3-201ENST00000295738 2037 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
DEPDC4Q8N2C3 CHPF-201ENST00000243776 3013 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
DEPDC4Q8N2C3 DSCC1-201ENST00000313655 2314 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
DEPDC4Q8N2C3 ZNF205-206ENST00000620094 2309 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
DEPDC4Q8N2C3 NUDT22-201ENST00000279206 1094 ntAPPRIS P3 TSL 1 (best) BASIC17.81■□□□□ 0.44
DEPDC4Q8N2C3 TTC9B-201ENST00000311308 843 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
DEPDC4Q8N2C3 SDHC-201ENST00000342751 1127 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
DEPDC4Q8N2C3 WIPF1-207ENST00000410117 777 ntTSL 3 BASIC17.81■□□□□ 0.44
DEPDC4Q8N2C3 CD99P1-203ENST00000431582 602 ntTSL 4 BASIC17.81■□□□□ 0.44
DEPDC4Q8N2C3 NUDT22-204ENST00000441250 986 ntAPPRIS ALT2 TSL 5 BASIC17.81■□□□□ 0.44
DEPDC4Q8N2C3 HAGLR-207ENST00000452365 661 ntTSL 4 BASIC17.81■□□□□ 0.44
DEPDC4Q8N2C3 FADS3-204ENST00000525588 1254 ntTSL 5 BASIC17.81■□□□□ 0.44
DEPDC4Q8N2C3 ZNF324-202ENST00000535298 1006 ntTSL 5 BASIC17.81■□□□□ 0.44
DEPDC4Q8N2C3 AC003102.1-201ENST00000588279 569 ntTSL 4 BASIC17.81■□□□□ 0.44
DEPDC4Q8N2C3 CYP2T3P-201ENST00000601990 817 ntBASIC17.81■□□□□ 0.44
DEPDC4Q8N2C3 ZNF274-212ENST00000617501 2538 ntAPPRIS P4 TSL 1 (best) BASIC17.81■□□□□ 0.44
DEPDC4Q8N2C3 SYTL1-210ENST00000616558 1878 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
DEPDC4Q8N2C3 TFEB-203ENST00000358871 2188 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
DEPDC4Q8N2C3 COBLL1-201ENST00000342193 4898 ntAPPRIS P3 TSL 1 (best) BASIC17.81■□□□□ 0.44
DEPDC4Q8N2C3 ADCY3-201ENST00000260600 5050 ntAPPRIS P3 TSL 1 (best) BASIC17.81■□□□□ 0.44
DEPDC4Q8N2C3 SLC5A10-203ENST00000395645 2069 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
DEPDC4Q8N2C3 DEF8-211ENST00000563795 1767 ntTSL 5 BASIC17.81■□□□□ 0.44
DEPDC4Q8N2C3 RGS9BP-201ENST00000334176 2894 ntAPPRIS P1 BASIC17.81■□□□□ 0.44
DEPDC4Q8N2C3 PLA2R1-202ENST00000392771 5160 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
DEPDC4Q8N2C3 RTEL1-204ENST00000370003 2273 ntTSL 2 BASIC17.81■□□□□ 0.44
DEPDC4Q8N2C3 C11orf80-214ENST00000532565 1948 ntAPPRIS ALT2 TSL 5 BASIC17.8■□□□□ 0.44
DEPDC4Q8N2C3 MTDH-203ENST00000519934 2184 ntTSL 5 BASIC17.8■□□□□ 0.44
DEPDC4Q8N2C3 SLC36A1-209ENST00000521925 1621 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
DEPDC4Q8N2C3 FBXL22-202ENST00000534939 2443 ntAPPRIS ALT2 TSL 3 BASIC17.8■□□□□ 0.44
DEPDC4Q8N2C3 TADA2B-204ENST00000512388 1343 ntTSL 5 BASIC17.8■□□□□ 0.44
DEPDC4Q8N2C3 PQLC2-202ENST00000375155 1805 ntAPPRIS P1 TSL 2 BASIC17.8■□□□□ 0.44
DEPDC4Q8N2C3 ATF5-201ENST00000423777 2069 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
DEPDC4Q8N2C3 GRM2-204ENST00000442933 2064 ntTSL 5 BASIC17.8■□□□□ 0.44
DEPDC4Q8N2C3 DAG1-220ENST00000539901 5665 ntAPPRIS P1 TSL 5 BASIC17.8■□□□□ 0.44
DEPDC4Q8N2C3 PDP1-208ENST00000520728 2554 ntAPPRIS P3 TSL 1 (best) BASIC17.8■□□□□ 0.44
DEPDC4Q8N2C3 PRSS3-202ENST00000361005 966 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
DEPDC4Q8N2C3 DUSP5P2-201ENST00000426873 1033 ntBASIC17.8■□□□□ 0.44
DEPDC4Q8N2C3 AC091874.3-201ENST00000512672 1195 ntBASIC17.8■□□□□ 0.44
DEPDC4Q8N2C3 BET1L-207ENST00000529614 560 ntTSL 5 BASIC17.8■□□□□ 0.44
DEPDC4Q8N2C3 BEAN1-AS1-201ENST00000564618 533 ntTSL 4 BASIC17.8■□□□□ 0.44
DEPDC4Q8N2C3 PLK5-204ENST00000588430 900 ntAPPRIS ALT2 TSL 5 BASIC17.8■□□□□ 0.44
DEPDC4Q8N2C3 PTMS-207ENST00000619580 1150 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
DEPDC4Q8N2C3 AC068987.5-201ENST00000642069 987 ntAPPRIS P1 BASIC17.8■□□□□ 0.44
DEPDC4Q8N2C3 GCOM1-201ENST00000380568 1516 ntAPPRIS ALT2 TSL 2 BASIC17.8■□□□□ 0.44
DEPDC4Q8N2C3 PDE3B-201ENST00000282096 6076 ntAPPRIS P2 TSL 1 (best) BASIC17.8■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 34.9 ms