Protein–RNA interactions for Protein: Q8IVM7

LINC00346, Putative uncharacterized protein encoded by LINC00346, humanhuman

Predictions only

Length 164 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00346Q8IVM7 GALNT2-201ENST00000366672 4454 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
LINC00346Q8IVM7 ADAM33-202ENST00000356518 3677 ntAPPRIS P3 TSL 1 (best) BASIC16.99■□□□□ 0.31
LINC00346Q8IVM7 C15orf56-202ENST00000623360 2129 ntTSL 2 BASIC16.99■□□□□ 0.31
LINC00346Q8IVM7 SLC47A1-202ENST00000395585 1998 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
LINC00346Q8IVM7 CCT5-214ENST00000515676 1997 ntTSL 2 BASIC16.98■□□□□ 0.31
LINC00346Q8IVM7 FAM91A1-201ENST00000334705 5511 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
LINC00346Q8IVM7 ZNF385C-201ENST00000436535 1572 ntAPPRIS P1 TSL 5 BASIC16.98■□□□□ 0.31
LINC00346Q8IVM7 NOL3-204ENST00000564053 1592 ntAPPRIS ALT2 TSL 2 BASIC16.98■□□□□ 0.31
LINC00346Q8IVM7 TSG101-201ENST00000251968 1824 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
LINC00346Q8IVM7 VWA8-AS1-201ENST00000611103 2079 ntTSL 2 BASIC16.98■□□□□ 0.31
LINC00346Q8IVM7 CLDND1-203ENST00000394181 2170 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
LINC00346Q8IVM7 STARD3-209ENST00000544210 1666 ntTSL 2 BASIC16.98■□□□□ 0.31
LINC00346Q8IVM7 POU5F1-201ENST00000259915 1420 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
LINC00346Q8IVM7 PCDHAC2-201ENST00000289269 5963 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
LINC00346Q8IVM7 CMTM7-201ENST00000334983 2038 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
LINC00346Q8IVM7 DBNL-219ENST00000490734 2004 ntTSL 2 BASIC16.98■□□□□ 0.31
LINC00346Q8IVM7 HOXD11-201ENST00000249504 1533 ntAPPRIS P1 TSL 3 BASIC16.98■□□□□ 0.31
LINC00346Q8IVM7 B4GALT1-202ENST00000535206 1535 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
LINC00346Q8IVM7 SULF2-201ENST00000359930 4915 ntAPPRIS P4 TSL 1 (best) BASIC16.98■□□□□ 0.31
LINC00346Q8IVM7 PFN3-201ENST00000358571 530 ntAPPRIS P1 BASIC16.98■□□□□ 0.31
LINC00346Q8IVM7 IPO13-201ENST00000372339 1201 ntTSL 2 BASIC16.98■□□□□ 0.31
LINC00346Q8IVM7 C6orf48-205ENST00000375640 1053 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
LINC00346Q8IVM7 AC079145.1-201ENST00000416575 541 ntTSL 2 BASIC16.98■□□□□ 0.31
LINC00346Q8IVM7 GCC2-AS1-202ENST00000440975 574 ntTSL 4 BASIC16.98■□□□□ 0.31
LINC00346Q8IVM7 FADS3-204ENST00000525588 1254 ntTSL 5 BASIC16.98■□□□□ 0.31
LINC00346Q8IVM7 AC073912.1-201ENST00000546264 587 ntTSL 3 BASIC16.98■□□□□ 0.31
LINC00346Q8IVM7 CLN6-207ENST00000566347 981 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
LINC00346Q8IVM7 C17orf50-201ENST00000603305 569 ntTSL 3 BASIC16.98■□□□□ 0.31
LINC00346Q8IVM7 C17orf50-203ENST00000605587 1018 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
LINC00346Q8IVM7 FKRP-202ENST00000391909 2801 ntAPPRIS P1 TSL 2 BASIC16.98■□□□□ 0.31
LINC00346Q8IVM7 IL15-208ENST00000529613 1355 ntAPPRIS P1 TSL 5 BASIC16.98■□□□□ 0.31
LINC00346Q8IVM7 HCG11-201ENST00000411553 5696 ntBASIC16.98■□□□□ 0.31
LINC00346Q8IVM7 PDLIM2-204ENST00000397760 1847 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
LINC00346Q8IVM7 ZDHHC2-201ENST00000262096 6377 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
LINC00346Q8IVM7 FAM189B-204ENST00000368368 2609 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
LINC00346Q8IVM7 TRPC1-203ENST00000476941 3061 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
LINC00346Q8IVM7 ZNF394-203ENST00000426306 2017 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
LINC00346Q8IVM7 WWOX-205ENST00000539474 1670 ntTSL 5 BASIC16.97■□□□□ 0.31
LINC00346Q8IVM7 AC083805.3-201ENST00000619560 1315 ntTSL 3 BASIC16.97■□□□□ 0.31
LINC00346Q8IVM7 C6orf89-203ENST00000373685 1400 ntAPPRIS ALT2 TSL 5 BASIC16.97■□□□□ 0.31
LINC00346Q8IVM7 SLC25A20-201ENST00000319017 1879 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
LINC00346Q8IVM7 TFDP2-202ENST00000467072 1853 ntAPPRIS P3 TSL 1 (best) BASIC16.97■□□□□ 0.31
LINC00346Q8IVM7 TMEM175-220ENST00000515740 1514 ntTSL 3 BASIC16.97■□□□□ 0.31
LINC00346Q8IVM7 HIBADH-201ENST00000265395 1990 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
LINC00346Q8IVM7 TUBA3FP-202ENST00000422086 1974 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
LINC00346Q8IVM7 AC138356.1-201ENST00000330539 2086 ntTSL 2 BASIC16.97■□□□□ 0.31
LINC00346Q8IVM7 RBPJL-203ENST00000372743 1623 ntAPPRIS ALT1 TSL 1 (best) BASIC16.97■□□□□ 0.31
LINC00346Q8IVM7 PEX16-210ENST00000532681 1639 ntTSL 3 BASIC16.97■□□□□ 0.31
LINC00346Q8IVM7 MOXD1-203ENST00000392401 2191 ntTSL 4 BASIC16.97■□□□□ 0.31
LINC00346Q8IVM7 RELA-202ENST00000406246 2700 ntAPPRIS P3 TSL 1 (best) BASIC16.97■□□□□ 0.31
LINC00346Q8IVM7 DLK1-202ENST00000341267 4722 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
LINC00346Q8IVM7 HCCS-201ENST00000321143 2277 ntAPPRIS P1 TSL 2 BASIC16.97■□□□□ 0.31
LINC00346Q8IVM7 CD99-203ENST00000381184 918 ntAPPRIS ALT2 TSL 5 BASIC16.97■□□□□ 0.31
LINC00346Q8IVM7 LINC00969-218ENST00000452844 583 ntTSL 3 BASIC16.97■□□□□ 0.31
LINC00346Q8IVM7 AP000282.1-201ENST00000454622 682 ntTSL 2 BASIC16.97■□□□□ 0.31
LINC00346Q8IVM7 LINC00969-221ENST00000457233 1279 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
LINC00346Q8IVM7 F2R-202ENST00000505600 442 ntTSL 2 BASIC16.97■□□□□ 0.31
LINC00346Q8IVM7 CA3-AS1-201ENST00000517697 559 ntTSL 4 BASIC16.97■□□□□ 0.31
LINC00346Q8IVM7 PDXDC2P-202ENST00000527016 543 ntTSL 3 BASIC16.97■□□□□ 0.31
LINC00346Q8IVM7 ZNF580-203ENST00000545125 1025 ntAPPRIS P1 TSL 3 BASIC16.97■□□□□ 0.31
LINC00346Q8IVM7 LINC01578-208ENST00000557147 490 ntTSL 3 BASIC16.97■□□□□ 0.31
LINC00346Q8IVM7 AC233263.1-201ENST00000578059 224 ntBASIC16.97■□□□□ 0.31
LINC00346Q8IVM7 IL15RA-221ENST00000620865 1037 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
LINC00346Q8IVM7 SLC6A6-208ENST00000621751 1252 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
LINC00346Q8IVM7 ASPHD2-201ENST00000215906 3357 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
LINC00346Q8IVM7 FER1L4-211ENST00000616283 1818 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
LINC00346Q8IVM7 FDFT1-226ENST00000623368 2368 ntTSL 2 BASIC16.97■□□□□ 0.31
LINC00346Q8IVM7 KCNA3-201ENST00000369769 2569 ntAPPRIS P1 BASIC16.97■□□□□ 0.31
LINC00346Q8IVM7 ILKAP-201ENST00000254654 1490 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
LINC00346Q8IVM7 NBPF21P-201ENST00000425093 1451 ntBASIC16.97■□□□□ 0.31
LINC00346Q8IVM7 AKT1-211ENST00000554848 1595 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
LINC00346Q8IVM7 FA2H-201ENST00000219368 2424 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
LINC00346Q8IVM7 HOXC13-201ENST00000243056 2423 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
LINC00346Q8IVM7 HTRA3-201ENST00000307358 2541 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
LINC00346Q8IVM7 GOLPH3-201ENST00000265070 2721 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
LINC00346Q8IVM7 ASB6-202ENST00000277459 2180 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
LINC00346Q8IVM7 PRR7-202ENST00000502922 1345 ntAPPRIS P1 TSL 2 BASIC16.96■□□□□ 0.31
LINC00346Q8IVM7 ARRB2-216ENST00000574954 1348 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
LINC00346Q8IVM7 PPP2R5A-201ENST00000261461 3128 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
LINC00346Q8IVM7 SNAPC2-201ENST00000221573 1542 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
LINC00346Q8IVM7 GPC5-201ENST00000377067 2957 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
LINC00346Q8IVM7 SPON2-203ENST00000431380 1802 ntAPPRIS P1 TSL 5 BASIC16.96■□□□□ 0.31
LINC00346Q8IVM7 PSPC1-206ENST00000619300 2013 ntAPPRIS P1 TSL 5 BASIC16.96■□□□□ 0.31
LINC00346Q8IVM7 IRS2-201ENST00000375856 8138 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
LINC00346Q8IVM7 LRWD1-201ENST00000292616 2215 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
LINC00346Q8IVM7 NRG2-202ENST00000289422 2923 ntTSL 5 BASIC16.96■□□□□ 0.31
LINC00346Q8IVM7 CNNM3-202ENST00000377060 3308 ntTSL 2 BASIC16.96■□□□□ 0.31
LINC00346Q8IVM7 RGCC-201ENST00000379359 960 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
LINC00346Q8IVM7 AC068831.2-201ENST00000448987 367 ntTSL 2 BASIC16.96■□□□□ 0.31
LINC00346Q8IVM7 THAP6-213ENST00000514480 1161 ntAPPRIS P3 TSL 1 (best) BASIC16.96■□□□□ 0.31
LINC00346Q8IVM7 CYB561-214ENST00000582034 1193 ntTSL 2 BASIC16.96■□□□□ 0.31
LINC00346Q8IVM7 AC069544.1-201ENST00000609399 999 ntBASIC16.96■□□□□ 0.31
LINC00346Q8IVM7 CYHR1-202ENST00000403000 1477 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
LINC00346Q8IVM7 TMEM191A-208ENST00000450925 1961 ntTSL 2 BASIC16.96■□□□□ 0.31
LINC00346Q8IVM7 SIX5-203ENST00000560168 1975 ntTSL 4 BASIC16.96■□□□□ 0.31
LINC00346Q8IVM7 TRABD-203ENST00000395827 2172 ntAPPRIS P3 TSL 5 BASIC16.96■□□□□ 0.31
LINC00346Q8IVM7 FBLN1-201ENST00000262722 2251 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
LINC00346Q8IVM7 UNC5B-201ENST00000335350 6841 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
LINC00346Q8IVM7 TP53BP2-201ENST00000343537 4651 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
LINC00346Q8IVM7 IMPAD1-201ENST00000262644 7199 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 24 ms