Protein–RNA interactions for Protein: Q8IUI8

CRLF3, Cytokine receptor-like factor 3, humanhuman

Predictions only

Length 442 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CRLF3Q8IUI8 ASPHD1-201ENST00000308748 1584 ntAPPRIS P2 TSL 1 (best) BASIC19.15■□□□□ 0.66
CRLF3Q8IUI8 LAD1-202ENST00000391967 2906 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
CRLF3Q8IUI8 AL390961.4-201ENST00000623958 2535 ntBASIC19.15■□□□□ 0.66
CRLF3Q8IUI8 SORCS3-202ENST00000369701 5757 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
CRLF3Q8IUI8 PRR36-202ENST00000618550 4456 ntAPPRIS P2 TSL 5 BASIC19.15■□□□□ 0.66
CRLF3Q8IUI8 C19orf25-207ENST00000588871 2128 ntTSL 5 BASIC19.15■□□□□ 0.66
CRLF3Q8IUI8 ST3GAL4-203ENST00000392669 1724 ntAPPRIS ALT1 TSL 1 (best) BASIC19.15■□□□□ 0.66
CRLF3Q8IUI8 KRT86-202ENST00000423955 2217 ntAPPRIS P1 TSL 2 BASIC19.15■□□□□ 0.66
CRLF3Q8IUI8 CCDC3-201ENST00000378825 2731 ntAPPRIS P3 TSL 1 (best) BASIC19.15■□□□□ 0.66
CRLF3Q8IUI8 SPRED3-201ENST00000338502 4778 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
CRLF3Q8IUI8 IQGAP2-201ENST00000274364 5844 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
CRLF3Q8IUI8 GDF15-201ENST00000252809 1200 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
CRLF3Q8IUI8 GGTLC1-201ENST00000278765 974 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
CRLF3Q8IUI8 NAA20-202ENST00000334982 1260 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
CRLF3Q8IUI8 ABHD17AP1-201ENST00000358206 933 ntBASIC19.15■□□□□ 0.66
CRLF3Q8IUI8 LINC01191-201ENST00000412690 844 ntTSL 2 BASIC19.15■□□□□ 0.66
CRLF3Q8IUI8 AL391244.2-201ENST00000428932 543 ntTSL 2 BASIC19.15■□□□□ 0.66
CRLF3Q8IUI8 LINC01637-201ENST00000444039 684 ntTSL 2 BASIC19.15■□□□□ 0.66
CRLF3Q8IUI8 DNAJA4-210ENST00000489435 947 ntTSL 3 BASIC19.15■□□□□ 0.66
CRLF3Q8IUI8 AC100791.3-201ENST00000617619 330 ntBASIC19.15■□□□□ 0.66
CRLF3Q8IUI8 AC068987.5-201ENST00000642069 987 ntAPPRIS P1 BASIC19.15■□□□□ 0.66
CRLF3Q8IUI8 TMEM91-209ENST00000539627 1843 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
CRLF3Q8IUI8 ABCC6-209ENST00000640696 1893 ntTSL 5 BASIC19.15■□□□□ 0.66
CRLF3Q8IUI8 USP49-202ENST00000373010 2446 ntTSL 5 BASIC19.15■□□□□ 0.66
CRLF3Q8IUI8 SPEG-203ENST00000396688 1457 ntTSL 3 BASIC19.15■□□□□ 0.66
CRLF3Q8IUI8 MORF4L1-215ENST00000559345 1468 ntTSL 2 BASIC19.15■□□□□ 0.66
CRLF3Q8IUI8 GCOM1-201ENST00000380568 1516 ntAPPRIS ALT2 TSL 2 BASIC19.15■□□□□ 0.66
CRLF3Q8IUI8 PPM1D-204ENST00000629650 1525 ntTSL 5 BASIC19.15■□□□□ 0.66
CRLF3Q8IUI8 ZNF302-206ENST00000505242 2849 ntAPPRIS P3 TSL 1 (best) BASIC19.15■□□□□ 0.66
CRLF3Q8IUI8 PLEKHB2-204ENST00000409158 2277 ntTSL 2 BASIC19.14■□□□□ 0.66
CRLF3Q8IUI8 COMP-202ENST00000425807 2292 ntTSL 2 BASIC19.14■□□□□ 0.66
CRLF3Q8IUI8 CHST11-205ENST00000549260 5696 ntAPPRIS ALT1 TSL 1 (best) BASIC19.14■□□□□ 0.66
CRLF3Q8IUI8 PRDM5-201ENST00000264808 5330 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
CRLF3Q8IUI8 MAP3K11-210ENST00000532507 1812 ntTSL 2 BASIC19.14■□□□□ 0.65
CRLF3Q8IUI8 ANKS3-201ENST00000304283 2662 ntAPPRIS P1 TSL 2 BASIC19.14■□□□□ 0.65
CRLF3Q8IUI8 DCHS2-201ENST00000339452 5064 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
CRLF3Q8IUI8 ZNF768-202ENST00000562803 1999 ntAPPRIS ALT2 TSL 3 BASIC19.14■□□□□ 0.65
CRLF3Q8IUI8 CBSL-210ENST00000624934 1992 ntTSL 5 BASIC19.14■□□□□ 0.65
CRLF3Q8IUI8 C16orf74-201ENST00000284245 906 ntAPPRIS P2 TSL 1 (best) BASIC19.14■□□□□ 0.65
CRLF3Q8IUI8 C2orf82-203ENST00000409533 561 ntAPPRIS P2 TSL 4 BASIC19.14■□□□□ 0.65
CRLF3Q8IUI8 EIF4E3-203ENST00000421769 777 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
CRLF3Q8IUI8 CD99P1-203ENST00000431582 602 ntTSL 4 BASIC19.14■□□□□ 0.65
CRLF3Q8IUI8 JOSD2-205ENST00000601423 802 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
CRLF3Q8IUI8 OGFR-204ENST00000621591 1194 ntTSL 5 BASIC19.14■□□□□ 0.65
CRLF3Q8IUI8 CCDC27-201ENST00000294600 2176 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
CRLF3Q8IUI8 CCDC17-209ENST00000528266 2181 ntAPPRIS P3 TSL 2 BASIC19.14■□□□□ 0.65
CRLF3Q8IUI8 VMAC-201ENST00000339485 2254 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
CRLF3Q8IUI8 SEMA6D-205ENST00000389425 2318 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
CRLF3Q8IUI8 BABAM1-208ENST00000598188 1470 ntAPPRIS P3 TSL 1 (best) BASIC19.14■□□□□ 0.65
CRLF3Q8IUI8 ACTL6B-201ENST00000160382 1537 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
CRLF3Q8IUI8 SMUG1-202ENST00000337581 1571 ntAPPRIS P1 TSL 2 BASIC19.14■□□□□ 0.65
CRLF3Q8IUI8 ZNF385C-201ENST00000436535 1572 ntAPPRIS P1 TSL 5 BASIC19.14■□□□□ 0.65
CRLF3Q8IUI8 AP001626.1-201ENST00000424890 2854 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
CRLF3Q8IUI8 HCK-206ENST00000518730 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
CRLF3Q8IUI8 UPP1-201ENST00000331803 1932 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
CRLF3Q8IUI8 CD8A-202ENST00000352580 1977 ntAPPRIS ALT2 TSL 2 BASIC19.13■□□□□ 0.65
CRLF3Q8IUI8 TMEM191A-208ENST00000450925 1961 ntTSL 2 BASIC19.13■□□□□ 0.65
CRLF3Q8IUI8 RAP1GAP-204ENST00000374761 3318 ntTSL 5 BASIC19.13■□□□□ 0.65
CRLF3Q8IUI8 N4BP3-201ENST00000274605 6080 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
CRLF3Q8IUI8 AC135050.7-201ENST00000624508 2218 ntBASIC19.13■□□□□ 0.65
CRLF3Q8IUI8 KLHL40-201ENST00000287777 2517 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
CRLF3Q8IUI8 NUTM2F-202ENST00000341207 2516 ntAPPRIS ALT2 TSL 5 BASIC19.13■□□□□ 0.65
CRLF3Q8IUI8 NUTM2G-202ENST00000372322 2516 ntAPPRIS ALT2 TSL 5 BASIC19.13■□□□□ 0.65
CRLF3Q8IUI8 EXTL3-201ENST00000220562 6483 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
CRLF3Q8IUI8 RAB4A-201ENST00000366690 2966 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
CRLF3Q8IUI8 GTF2IP4-202ENST00000544802 3609 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
CRLF3Q8IUI8 AL355472.2-201ENST00000422958 438 ntBASIC19.13■□□□□ 0.65
CRLF3Q8IUI8 AP000282.1-201ENST00000454622 682 ntTSL 2 BASIC19.13■□□□□ 0.65
CRLF3Q8IUI8 ELOVL2-AS1-201ENST00000456190 737 ntTSL 3 BASIC19.13■□□□□ 0.65
CRLF3Q8IUI8 MARC2-201ENST00000359316 1335 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
CRLF3Q8IUI8 OPRD1-201ENST00000234961 9345 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
CRLF3Q8IUI8 RNF157-201ENST00000269391 4955 ntAPPRIS P3 TSL 1 (best) BASIC19.13■□□□□ 0.65
CRLF3Q8IUI8 HIKESHI-207ENST00000533986 1694 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
CRLF3Q8IUI8 ZNF843-203ENST00000618063 1765 ntAPPRIS P2 TSL 1 (best) BASIC19.13■□□□□ 0.65
CRLF3Q8IUI8 CTBP2-214ENST00000531469 1918 ntAPPRIS P1 TSL 2 BASIC19.13■□□□□ 0.65
CRLF3Q8IUI8 NUMBL-202ENST00000540131 1931 ntAPPRIS ALT2 TSL 2 BASIC19.13■□□□□ 0.65
CRLF3Q8IUI8 CAMKK2-206ENST00000402834 2051 ntAPPRIS P4 TSL 1 (best) BASIC19.13■□□□□ 0.65
CRLF3Q8IUI8 AC090164.3-201ENST00000610780 2143 ntBASIC19.13■□□□□ 0.65
CRLF3Q8IUI8 OTOP3-201ENST00000328801 2363 ntAPPRIS P1 TSL 2 BASIC19.13■□□□□ 0.65
CRLF3Q8IUI8 PPP1R12C-202ENST00000435544 2363 ntTSL 2 BASIC19.13■□□□□ 0.65
CRLF3Q8IUI8 PGAP1-204ENST00000409475 2443 ntTSL 2 BASIC19.13■□□□□ 0.65
CRLF3Q8IUI8 MSLN-207ENST00000566549 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
CRLF3Q8IUI8 URI1-202ENST00000392271 3444 ntAPPRIS P3 TSL 1 (best) BASIC19.13■□□□□ 0.65
CRLF3Q8IUI8 EEPD1-201ENST00000242108 4765 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
CRLF3Q8IUI8 CRKL-201ENST00000354336 5325 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
CRLF3Q8IUI8 CPAMD8-203ENST00000443236 5992 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
CRLF3Q8IUI8 INTS10-201ENST00000397977 2804 ntAPPRIS P1 TSL 2 BASIC19.12■□□□□ 0.65
CRLF3Q8IUI8 RAB4A-205ENST00000618010 2799 ntTSL 3 BASIC19.12■□□□□ 0.65
CRLF3Q8IUI8 GAS2L1P2-202ENST00000442849 2262 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
CRLF3Q8IUI8 C2orf81-201ENST00000290390 2227 ntAPPRIS P5 TSL 5 BASIC19.12■□□□□ 0.65
CRLF3Q8IUI8 NPAS1-207ENST00000602189 1643 ntTSL 5 BASIC19.12■□□□□ 0.65
CRLF3Q8IUI8 ATPAF2-206ENST00000474627 1564 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
CRLF3Q8IUI8 SNX27-203ENST00000368843 7197 ntAPPRIS P3 TSL 1 (best) BASIC19.12■□□□□ 0.65
CRLF3Q8IUI8 LINC00471-201ENST00000313064 1282 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
CRLF3Q8IUI8 CBY3-201ENST00000376974 785 ntAPPRIS P1 TSL 2 BASIC19.12■□□□□ 0.65
CRLF3Q8IUI8 ZNF295-AS1-201ENST00000412906 952 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
CRLF3Q8IUI8 TSPY20P-201ENST00000450910 630 ntBASIC19.12■□□□□ 0.65
CRLF3Q8IUI8 C17orf107-202ENST00000521575 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
CRLF3Q8IUI8 ZNF324-202ENST00000535298 1006 ntTSL 5 BASIC19.12■□□□□ 0.65
CRLF3Q8IUI8 NDUFB10-204ENST00000569148 628 ntTSL 2 BASIC19.12■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 37.1 ms