Protein–RNA interactions for Protein: Q86Y22

COL23A1, Collagen alpha-1(XXIII) chain, humanhuman

Predicted RBP Predictions only

Length 540 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL23A1Q86Y22 SCFD2-204ENST00000611795 1320 ntTSL 5 BASIC24.13■■□□□ 1.45
COL23A1Q86Y22 CFP-201ENST00000247153 1713 ntAPPRIS P2 TSL 5 BASIC24.13■■□□□ 1.45
COL23A1Q86Y22 LIMS2-201ENST00000324938 2111 ntAPPRIS P3 TSL 1 (best) BASIC24.13■■□□□ 1.45
COL23A1Q86Y22 KCNK13-201ENST00000282146 2522 ntAPPRIS P1 TSL 1 (best) BASIC24.13■■□□□ 1.45
COL23A1Q86Y22 BID-212ENST00000614949 1988 ntTSL 5 BASIC24.13■■□□□ 1.45
COL23A1Q86Y22 TNFAIP3-207ENST00000614035 1430 ntTSL 5 BASIC24.13■■□□□ 1.45
COL23A1Q86Y22 GPR42-201ENST00000454971 1804 ntAPPRIS P1 TSL 1 (best) BASIC24.13■■□□□ 1.45
COL23A1Q86Y22 TMEM237-213ENST00000621467 1824 ntAPPRIS ALT2 TSL 1 (best) BASIC24.13■■□□□ 1.45
COL23A1Q86Y22 HACD1-202ENST00000361271 2237 ntAPPRIS P1 TSL 1 (best) BASIC24.13■■□□□ 1.45
COL23A1Q86Y22 CMTM1-204ENST00000336328 606 ntAPPRIS ALT2 TSL 1 (best) BASIC24.13■■□□□ 1.45
COL23A1Q86Y22 AL590627.1-203ENST00000421194 1026 ntBASIC24.13■■□□□ 1.45
COL23A1Q86Y22 SMN1-203ENST00000503079 1219 ntTSL 5 BASIC24.13■■□□□ 1.45
COL23A1Q86Y22 CMTM1-213ENST00000529506 581 ntAPPRIS ALT2 TSL 1 (best) BASIC24.13■■□□□ 1.45
COL23A1Q86Y22 AC009084.1-201ENST00000566869 317 ntTSL 5 BASIC24.13■■□□□ 1.45
COL23A1Q86Y22 SRSF1-209ENST00000585096 568 ntTSL 4 BASIC24.13■■□□□ 1.45
COL23A1Q86Y22 AC036176.1-201ENST00000589905 785 ntTSL 2 BASIC24.13■■□□□ 1.45
COL23A1Q86Y22 AL512343.2-201ENST00000609423 490 ntTSL 2 BASIC24.13■■□□□ 1.45
COL23A1Q86Y22 AF228730.7-201ENST00000641842 219 ntBASIC24.13■■□□□ 1.45
COL23A1Q86Y22 ACAA1-201ENST00000301810 1540 ntTSL 1 (best) BASIC24.13■■□□□ 1.45
COL23A1Q86Y22 MAL2-204ENST00000614891 2818 ntAPPRIS P1 TSL 1 (best) BASIC24.13■■□□□ 1.45
COL23A1Q86Y22 RAX-201ENST00000256852 2935 ntTSL 1 (best) BASIC24.13■■□□□ 1.45
COL23A1Q86Y22 DTNB-207ENST00000405222 2273 ntTSL 1 (best) BASIC24.13■■□□□ 1.45
COL23A1Q86Y22 USP39-203ENST00000409470 2034 ntAPPRIS P1 TSL 1 (best) BASIC24.12■■□□□ 1.45
COL23A1Q86Y22 AL391807.1-203ENST00000604392 2365 ntBASIC24.12■■□□□ 1.45
COL23A1Q86Y22 MMP24-AS1-201ENST00000424358 867 ntAPPRIS P1 TSL 2 BASIC24.12■■□□□ 1.45
COL23A1Q86Y22 RPP21-221ENST00000428040 594 ntTSL 2 BASIC24.12■■□□□ 1.45
COL23A1Q86Y22 RPP21-224ENST00000442966 525 ntAPPRIS P1 TSL 1 (best) BASIC24.12■■□□□ 1.45
COL23A1Q86Y22 PCAT7-201ENST00000452148 1164 ntTSL 2 BASIC24.12■■□□□ 1.45
COL23A1Q86Y22 MMP24-AS1-209ENST00000456790 712 ntAPPRIS P1 TSL 2 BASIC24.12■■□□□ 1.45
COL23A1Q86Y22 TYROBP-209ENST00000589517 415 ntAPPRIS ALT1 TSL 1 (best) BASIC24.12■■□□□ 1.45
COL23A1Q86Y22 AL136038.4-201ENST00000603606 1261 ntBASIC24.12■■□□□ 1.45
COL23A1Q86Y22 FDFT1-210ENST00000525954 1890 ntTSL 2 BASIC24.12■■□□□ 1.45
COL23A1Q86Y22 DTNB-201ENST00000288642 2464 ntAPPRIS ALT2 TSL 2 BASIC24.12■■□□□ 1.45
COL23A1Q86Y22 DTNB-208ENST00000406818 2474 ntAPPRIS P4 TSL 1 (best) BASIC24.12■■□□□ 1.45
COL23A1Q86Y22 PLIN2-201ENST00000276914 1972 ntAPPRIS P1 TSL 1 (best) BASIC24.12■■□□□ 1.45
COL23A1Q86Y22 CSNK2A2-201ENST00000262506 1701 ntAPPRIS P1 TSL 1 (best) BASIC24.12■■□□□ 1.45
COL23A1Q86Y22 IL11RA-201ENST00000318041 1728 ntAPPRIS P1 TSL 1 (best) BASIC24.12■■□□□ 1.45
COL23A1Q86Y22 GTF3C5-201ENST00000342018 1905 ntTSL 5 BASIC24.12■■□□□ 1.45
COL23A1Q86Y22 AC036111.1-201ENST00000533973 1582 ntBASIC24.12■■□□□ 1.45
COL23A1Q86Y22 AC126773.2-201ENST00000562172 1682 ntTSL 3 BASIC24.11■■□□□ 1.45
COL23A1Q86Y22 TAX1BP3-202ENST00000611779 1302 ntTSL 2 BASIC24.11■■□□□ 1.45
COL23A1Q86Y22 RPL3-201ENST00000216146 1442 ntAPPRIS P1 TSL 1 (best) BASIC24.11■■□□□ 1.45
COL23A1Q86Y22 WNT5B-203ENST00000537031 1437 ntAPPRIS P1 TSL 2 BASIC24.11■■□□□ 1.45
COL23A1Q86Y22 NCF1B-201ENST00000423083 1516 ntTSL 2 BASIC24.11■■□□□ 1.45
COL23A1Q86Y22 ANKRD18DP-204ENST00000455355 1975 ntBASIC24.11■■□□□ 1.45
COL23A1Q86Y22 UBE2S-201ENST00000264552 2548 ntAPPRIS P1 TSL 1 (best) BASIC24.11■■□□□ 1.45
COL23A1Q86Y22 NPB-201ENST00000333383 704 ntAPPRIS P2 TSL 1 (best) BASIC24.11■■□□□ 1.45
COL23A1Q86Y22 DFFB-203ENST00000341385 572 ntTSL 5 BASIC24.11■■□□□ 1.45
COL23A1Q86Y22 MIR574-201ENST00000385209 96 ntBASIC24.11■■□□□ 1.45
COL23A1Q86Y22 KRT18P13-201ENST00000400056 1290 ntBASIC24.11■■□□□ 1.45
COL23A1Q86Y22 PENK-208ENST00000523051 772 ntTSL 5 BASIC24.11■■□□□ 1.45
COL23A1Q86Y22 AP003555.3-201ENST00000534086 432 ntTSL 4 BASIC24.11■■□□□ 1.45
COL23A1Q86Y22 BRICD5-203ENST00000566018 555 ntTSL 2 BASIC24.11■■□□□ 1.45
COL23A1Q86Y22 OSR2-201ENST00000297565 1838 ntAPPRIS P1 TSL 1 (best) BASIC24.11■■□□□ 1.45
COL23A1Q86Y22 AC079834.2-201ENST00000609776 1949 ntBASIC24.11■■□□□ 1.45
COL23A1Q86Y22 CYP2D7-201ENST00000358097 1655 ntTSL 1 (best) BASIC24.11■■□□□ 1.45
COL23A1Q86Y22 ZSCAN1-201ENST00000282326 2054 ntAPPRIS P1 TSL 2 BASIC24.11■■□□□ 1.45
COL23A1Q86Y22 C1QL4-201ENST00000334221 2071 ntAPPRIS P1 TSL 1 (best) BASIC24.11■■□□□ 1.45
COL23A1Q86Y22 FUOM-201ENST00000278025 709 ntAPPRIS P1 TSL 1 (best) BASIC24.1■■□□□ 1.45
COL23A1Q86Y22 ATP5J-201ENST00000284971 614 ntAPPRIS P1 TSL 1 (best) BASIC24.1■■□□□ 1.45
COL23A1Q86Y22 MIR202HG-201ENST00000300167 384 ntTSL 2 BASIC24.1■■□□□ 1.45
COL23A1Q86Y22 HINT1-201ENST00000304043 1081 ntAPPRIS P1 TSL 1 (best) BASIC24.1■■□□□ 1.45
COL23A1Q86Y22 VAMP5-201ENST00000306384 689 ntAPPRIS P1 TSL 1 (best) BASIC24.1■■□□□ 1.45
COL23A1Q86Y22 TRA2B-202ENST00000342294 288 ntTSL 1 (best) BASIC24.1■■□□□ 1.45
COL23A1Q86Y22 MRPL43-208ENST00000370242 884 ntTSL 2 BASIC24.1■■□□□ 1.45
COL23A1Q86Y22 SYS1-202ENST00000372727 813 ntAPPRIS P1 TSL 3 BASIC24.1■■□□□ 1.45
COL23A1Q86Y22 RAB24-204ENST00000393611 1236 ntAPPRIS P1 TSL 1 (best) BASIC24.1■■□□□ 1.45
COL23A1Q86Y22 AL137026.1-202ENST00000452578 1089 ntTSL 2 BASIC24.1■■□□□ 1.45
COL23A1Q86Y22 EFCAB11-211ENST00000556609 568 ntTSL 3 BASIC24.1■■□□□ 1.45
COL23A1Q86Y22 AL353801.3-201ENST00000609898 542 ntBASIC24.1■■□□□ 1.45
COL23A1Q86Y22 LMNB1-202ENST00000395354 1572 ntTSL 1 (best) BASIC24.1■■□□□ 1.45
COL23A1Q86Y22 GYG1-202ENST00000345003 2052 ntTSL 1 (best) BASIC24.1■■□□□ 1.45
COL23A1Q86Y22 C2orf72-201ENST00000373640 3657 ntAPPRIS P1 TSL 2 BASIC24.1■■□□□ 1.45
COL23A1Q86Y22 FAM212B-203ENST00000444059 1423 ntTSL 1 (best) BASIC24.1■■□□□ 1.45
COL23A1Q86Y22 NAA60-235ENST00000576916 1567 ntTSL 1 (best) BASIC24.09■■□□□ 1.45
COL23A1Q86Y22 TMEM14A-201ENST00000211314 992 ntAPPRIS P1 TSL 1 (best) BASIC24.09■■□□□ 1.45
COL23A1Q86Y22 TPM1-203ENST00000317516 738 ntTSL 1 (best) BASIC24.09■■□□□ 1.45
COL23A1Q86Y22 TPM1-218ENST00000559281 851 ntTSL 5 BASIC24.09■■□□□ 1.45
COL23A1Q86Y22 PTGIR-204ENST00000596260 1009 ntTSL 2 BASIC24.09■■□□□ 1.45
COL23A1Q86Y22 AC138894.3-201ENST00000603787 634 ntBASIC24.09■■□□□ 1.45
COL23A1Q86Y22 SYTL1-201ENST00000318074 1900 ntTSL 2 BASIC24.09■■□□□ 1.45
COL23A1Q86Y22 GRAMD1A-201ENST00000317991 2695 ntAPPRIS P3 TSL 1 (best) BASIC24.09■■□□□ 1.45
COL23A1Q86Y22 PQLC2-202ENST00000375155 1805 ntAPPRIS P1 TSL 2 BASIC24.09■■□□□ 1.45
COL23A1Q86Y22 ABCC5-204ENST00000392579 1848 ntTSL 1 (best) BASIC24.09■■□□□ 1.45
COL23A1Q86Y22 GPR139-202ENST00000570682 1613 ntAPPRIS P1 TSL 1 (best) BASIC24.09■■□□□ 1.45
COL23A1Q86Y22 PNKP-214ENST00000600573 1602 ntTSL 5 BASIC24.09■■□□□ 1.45
COL23A1Q86Y22 SOCS2-207ENST00000549206 2072 ntAPPRIS P1 TSL 3 BASIC24.09■■□□□ 1.45
COL23A1Q86Y22 SETD3-201ENST00000329331 1330 ntTSL 1 (best) BASIC24.09■■□□□ 1.45
COL23A1Q86Y22 KCNK4-202ENST00000422670 1697 ntAPPRIS P1 TSL 1 (best) BASIC24.08■■□□□ 1.45
COL23A1Q86Y22 KIRREL2-202ENST00000347900 2015 ntTSL 1 (best) BASIC24.08■■□□□ 1.45
COL23A1Q86Y22 HYLS1-203ENST00000526028 1803 ntAPPRIS P1 TSL 5 BASIC24.08■■□□□ 1.45
COL23A1Q86Y22 CRTC2-203ENST00000368633 2644 ntAPPRIS P1 TSL 1 (best) BASIC24.08■■□□□ 1.45
COL23A1Q86Y22 ZNF655-203ENST00000357864 1370 ntTSL 2 BASIC24.08■■□□□ 1.45
COL23A1Q86Y22 CCDC134-201ENST00000255784 1270 ntAPPRIS P1 TSL 1 (best) BASIC24.08■■□□□ 1.45
COL23A1Q86Y22 AKR1C7P-201ENST00000305623 895 ntBASIC24.08■■□□□ 1.45
COL23A1Q86Y22 CKLF-202ENST00000345436 571 ntAPPRIS ALT2 TSL 1 (best) BASIC24.08■■□□□ 1.45
COL23A1Q86Y22 MED4-202ENST00000378586 931 ntAPPRIS ALT2 TSL 2 BASIC24.08■■□□□ 1.45
COL23A1Q86Y22 ISG15-201ENST00000379389 711 ntAPPRIS P2 TSL 1 (best) BASIC24.08■■□□□ 1.45
COL23A1Q86Y22 SEC61G-203ENST00000415949 732 ntAPPRIS P1 TSL 5 BASIC24.08■■□□□ 1.45
COL23A1Q86Y22 AC080013.1-203ENST00000468242 720 ntTSL 5 BASIC24.08■■□□□ 1.45
Retrieved 100 of 98,524 protein–RNA pairs in 20 ms