Protein–RNA interactions for Protein: Q6P3S1

DENND1B, DENN domain-containing protein 1B, humanhuman

Predictions only

Length 775 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DENND1BQ6P3S1 MDFI-202ENST00000373050 809 ntTSL 2 BASIC20.32■□□□□ 0.84
DENND1BQ6P3S1 POLR2J-202ENST00000393794 784 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
DENND1BQ6P3S1 FAM86C1-203ENST00000426628 952 ntAPPRIS ALT2 TSL 2 BASIC20.32■□□□□ 0.84
DENND1BQ6P3S1 AC008040.2-201ENST00000461049 708 ntBASIC20.32■□□□□ 0.84
DENND1BQ6P3S1 CXCL2-202ENST00000508487 1218 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
DENND1BQ6P3S1 ANAPC11-207ENST00000572639 578 ntAPPRIS P1 TSL 3 BASIC20.32■□□□□ 0.84
DENND1BQ6P3S1 AL031985.4-201ENST00000642138 673 ntBASIC20.32■□□□□ 0.84
DENND1BQ6P3S1 RCC2P6-201ENST00000526625 1557 ntBASIC20.32■□□□□ 0.84
DENND1BQ6P3S1 GDF5OS-201ENST00000374375 1734 ntAPPRIS P1 TSL 2 BASIC20.32■□□□□ 0.84
DENND1BQ6P3S1 PIANP-201ENST00000320591 2323 ntAPPRIS P3 TSL 1 (best) BASIC20.32■□□□□ 0.84
DENND1BQ6P3S1 LMO4-202ENST00000370544 5405 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
DENND1BQ6P3S1 SNX27-204ENST00000458013 6403 ntAPPRIS ALT1 TSL 5 BASIC20.32■□□□□ 0.84
DENND1BQ6P3S1 LINC01586-201ENST00000506090 1840 ntTSL 2 BASIC20.32■□□□□ 0.84
DENND1BQ6P3S1 NHLH2-201ENST00000320238 2512 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
DENND1BQ6P3S1 PAFAH1B2-202ENST00000419197 2517 ntTSL 2 BASIC20.31■□□□□ 0.84
DENND1BQ6P3S1 HOXD12-202ENST00000406506 1318 ntAPPRIS P1 TSL 3 BASIC20.31■□□□□ 0.84
DENND1BQ6P3S1 SRI-203ENST00000419179 1307 ntTSL 2 BASIC20.31■□□□□ 0.84
DENND1BQ6P3S1 EZH2-201ENST00000320356 2639 ntAPPRIS P4 TSL 1 (best) BASIC20.31■□□□□ 0.84
DENND1BQ6P3S1 AL161938.1-201ENST00000569833 2180 ntBASIC20.31■□□□□ 0.84
DENND1BQ6P3S1 PTOV1-AS1-201ENST00000596521 2155 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
DENND1BQ6P3S1 ZNF385C-201ENST00000436535 1572 ntAPPRIS P1 TSL 5 BASIC20.31■□□□□ 0.84
DENND1BQ6P3S1 PTGER3-209ENST00000460330 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
DENND1BQ6P3S1 AL049812.1-201ENST00000432563 2267 ntBASIC20.31■□□□□ 0.84
DENND1BQ6P3S1 BIK-201ENST00000216115 953 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
DENND1BQ6P3S1 SPSB1-203ENST00000377399 1007 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
DENND1BQ6P3S1 TSPY23P-201ENST00000440136 739 ntBASIC20.31■□□□□ 0.84
DENND1BQ6P3S1 AC011506.1-201ENST00000474329 610 ntBASIC20.31■□□□□ 0.84
DENND1BQ6P3S1 AP003501.2-201ENST00000524433 477 ntTSL 4 BASIC20.31■□□□□ 0.84
DENND1BQ6P3S1 AF131216.3-201ENST00000525867 1099 ntTSL 2 BASIC20.31■□□□□ 0.84
DENND1BQ6P3S1 AMN1-211ENST00000541931 880 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
DENND1BQ6P3S1 AC044860.1-201ENST00000560756 1160 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
DENND1BQ6P3S1 AL354712.1-201ENST00000563570 477 ntTSL 3 BASIC20.31■□□□□ 0.84
DENND1BQ6P3S1 SMPD3-203ENST00000563226 2093 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
DENND1BQ6P3S1 RNF212-202ENST00000382968 2335 ntAPPRIS P3 TSL 1 (best) BASIC20.31■□□□□ 0.84
DENND1BQ6P3S1 HOXB9-201ENST00000311177 2581 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
DENND1BQ6P3S1 RBPMS-210ENST00000520191 1613 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
DENND1BQ6P3S1 HCN1-202ENST00000634658 4738 ntTSL 3 BASIC20.31■□□□□ 0.84
DENND1BQ6P3S1 CCDC34-202ENST00000328697 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
DENND1BQ6P3S1 TXNL1-211ENST00000590954 1339 ntAPPRIS P1 TSL 2 BASIC20.3■□□□□ 0.84
DENND1BQ6P3S1 PPP1R12C-202ENST00000435544 2363 ntTSL 2 BASIC20.3■□□□□ 0.84
DENND1BQ6P3S1 CFAP100-203ENST00000505024 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
DENND1BQ6P3S1 RPP25-201ENST00000322177 3049 ntAPPRIS P1 BASIC20.3■□□□□ 0.84
DENND1BQ6P3S1 FN3KRP-201ENST00000269373 1849 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
DENND1BQ6P3S1 NGLY1-202ENST00000280700 2473 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
DENND1BQ6P3S1 ANKRD53-202ENST00000360589 1666 ntAPPRIS ALT2 TSL 2 BASIC20.3■□□□□ 0.84
DENND1BQ6P3S1 PCGF3-208ENST00000470161 1652 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
DENND1BQ6P3S1 SLC27A3-214ENST00000624995 2413 ntAPPRIS P2 TSL 1 (best) BASIC20.3■□□□□ 0.84
DENND1BQ6P3S1 MESTP1-201ENST00000404287 994 ntBASIC20.3■□□□□ 0.84
DENND1BQ6P3S1 AP000697.1-201ENST00000430607 339 ntTSL 5 BASIC20.3■□□□□ 0.84
DENND1BQ6P3S1 AC091390.4-202ENST00000476426 537 ntBASIC20.3■□□□□ 0.84
DENND1BQ6P3S1 PAIP2-208ENST00000511706 468 ntTSL 5 BASIC20.3■□□□□ 0.84
DENND1BQ6P3S1 PENK-204ENST00000518770 863 ntTSL 2 BASIC20.3■□□□□ 0.84
DENND1BQ6P3S1 TMEM9B-203ENST00000528117 949 ntTSL 2 BASIC20.3■□□□□ 0.84
DENND1BQ6P3S1 AC087498.1-201ENST00000572493 945 ntAPPRIS P1 BASIC20.3■□□□□ 0.84
DENND1BQ6P3S1 KCNC3-203ENST00000477616 3176 ntAPPRIS P2 TSL 1 (best) BASIC20.3■□□□□ 0.84
DENND1BQ6P3S1 PIP5K1C-201ENST00000335312 5080 ntAPPRIS P3 TSL 1 (best) BASIC20.3■□□□□ 0.84
DENND1BQ6P3S1 YBX3-201ENST00000228251 1796 ntAPPRIS P3 TSL 1 (best) BASIC20.3■□□□□ 0.84
DENND1BQ6P3S1 INPP5J-203ENST00000401755 1751 ntTSL 2 BASIC20.3■□□□□ 0.84
DENND1BQ6P3S1 NCK2-205ENST00000451463 1795 ntTSL 2 BASIC20.3■□□□□ 0.84
DENND1BQ6P3S1 RSAD1-201ENST00000258955 2528 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
DENND1BQ6P3S1 KCNIP4-206ENST00000447367 1641 ntTSL 5 BASIC20.3■□□□□ 0.84
DENND1BQ6P3S1 DPF1-203ENST00000414789 1960 ntTSL 2 BASIC20.3■□□□□ 0.84
DENND1BQ6P3S1 HSDL1-202ENST00000434463 1493 ntTSL 2 BASIC20.3■□□□□ 0.84
DENND1BQ6P3S1 AGPAT5-201ENST00000285518 3685 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
DENND1BQ6P3S1 PDCD10-201ENST00000392750 2067 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
DENND1BQ6P3S1 RGMB-207ENST00000513185 2052 ntAPPRIS ALT2 TSL 2 BASIC20.3■□□□□ 0.84
DENND1BQ6P3S1 IRX1P1-201ENST00000438849 1838 ntBASIC20.3■□□□□ 0.84
DENND1BQ6P3S1 SERGEF-201ENST00000265965 1566 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
DENND1BQ6P3S1 CFP-203ENST00000396992 1592 ntAPPRIS P2 TSL 1 (best) BASIC20.29■□□□□ 0.84
DENND1BQ6P3S1 GLRB-207ENST00000541722 2765 ntTSL 5 BASIC20.29■□□□□ 0.84
DENND1BQ6P3S1 RBP4-202ENST00000371467 1314 ntAPPRIS P1 TSL 5 BASIC20.29■□□□□ 0.84
DENND1BQ6P3S1 C5orf47-201ENST00000340147 2522 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
DENND1BQ6P3S1 GPRIN2-201ENST00000374314 1696 ntAPPRIS P1 BASIC20.29■□□□□ 0.84
DENND1BQ6P3S1 TBXA2R-201ENST00000375190 2608 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
DENND1BQ6P3S1 ACTL6B-201ENST00000160382 1537 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
DENND1BQ6P3S1 DLGAP4-201ENST00000339266 5016 ntAPPRIS ALT2 TSL 5 BASIC20.29■□□□□ 0.84
DENND1BQ6P3S1 PCSK6-214ENST00000611716 4409 ntAPPRIS P4 TSL 1 (best) BASIC20.29■□□□□ 0.84
DENND1BQ6P3S1 MBIP-203ENST00000416007 1648 ntAPPRIS P3 TSL 1 (best) BASIC20.29■□□□□ 0.84
DENND1BQ6P3S1 CTNNBIP1-204ENST00000400904 1206 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
DENND1BQ6P3S1 CBLN3-202ENST00000555436 718 ntTSL 3 BASIC20.29■□□□□ 0.84
DENND1BQ6P3S1 RRS1-201ENST00000320270 1706 ntAPPRIS P1 BASIC20.29■□□□□ 0.84
DENND1BQ6P3S1 HEXDC-201ENST00000327949 1733 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
DENND1BQ6P3S1 DMWD-201ENST00000270223 3305 ntAPPRIS P2 TSL 1 (best) BASIC20.29■□□□□ 0.84
DENND1BQ6P3S1 CLDND1-203ENST00000394181 2170 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
DENND1BQ6P3S1 SLC39A1-209ENST00000537590 2022 ntTSL 2 BASIC20.29■□□□□ 0.84
DENND1BQ6P3S1 ADORA2A-201ENST00000337539 2569 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
DENND1BQ6P3S1 C21orf58-205ENST00000397683 1674 ntAPPRIS ALT2 TSL 2 BASIC20.29■□□□□ 0.84
DENND1BQ6P3S1 FAM131A-204ENST00000418281 1664 ntTSL 5 BASIC20.29■□□□□ 0.84
DENND1BQ6P3S1 AC026412.3-201ENST00000605200 1661 ntTSL 5 BASIC20.29■□□□□ 0.84
DENND1BQ6P3S1 TMPRSS5-201ENST00000299882 2232 ntAPPRIS P3 TSL 1 (best) BASIC20.29■□□□□ 0.84
DENND1BQ6P3S1 MMD2-201ENST00000401401 2335 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
DENND1BQ6P3S1 DKK3-203ENST00000525493 1326 ntTSL 2 BASIC20.28■□□□□ 0.84
DENND1BQ6P3S1 ABCC6-209ENST00000640696 1893 ntTSL 5 BASIC20.28■□□□□ 0.84
DENND1BQ6P3S1 STX17-212ENST00000534052 2424 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
DENND1BQ6P3S1 SCARB1-201ENST00000261693 2611 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
DENND1BQ6P3S1 ATF5-201ENST00000423777 2069 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
DENND1BQ6P3S1 GCOM1-201ENST00000380568 1516 ntAPPRIS ALT2 TSL 2 BASIC20.28■□□□□ 0.84
DENND1BQ6P3S1 KCNQ5-207ENST00000403813 6539 ntAPPRIS ALT2 TSL 5 BASIC20.28■□□□□ 0.84
DENND1BQ6P3S1 CPZ-202ENST00000360986 2267 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
DENND1BQ6P3S1 CORO1A-216ENST00000570045 1622 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Retrieved 100 of 98,524 protein–RNA pairs in 22.5 ms