Protein–RNA interactions for Protein: Q5VXM1

CDCP2, CUB domain-containing protein 2, humanhuman

Predictions only

Length 449 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDCP2Q5VXM1 MORF4L1-215ENST00000559345 1468 ntTSL 2 BASIC18.23■□□□□ 0.51
CDCP2Q5VXM1 PTMS-201ENST00000309083 1139 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
CDCP2Q5VXM1 MRPL20-201ENST00000344843 721 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
CDCP2Q5VXM1 HEBP2-201ENST00000367697 844 ntTSL 2 BASIC18.23■□□□□ 0.51
CDCP2Q5VXM1 PDLIM4-202ENST00000379018 1006 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
CDCP2Q5VXM1 DHRS4-203ENST00000397075 727 ntTSL 2 BASIC18.23■□□□□ 0.51
CDCP2Q5VXM1 DMKN-212ENST00000443640 842 ntAPPRIS ALT2 TSL 5 BASIC18.23■□□□□ 0.51
CDCP2Q5VXM1 AC092597.1-201ENST00000487352 616 ntBASIC18.23■□□□□ 0.51
CDCP2Q5VXM1 AC034232.1-201ENST00000506026 1064 ntBASIC18.23■□□□□ 0.51
CDCP2Q5VXM1 ANKRD34C-AS1-201ENST00000557790 594 ntTSL 3 BASIC18.23■□□□□ 0.51
CDCP2Q5VXM1 C16orf74-203ENST00000602675 744 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
CDCP2Q5VXM1 C16orf74-206ENST00000602766 832 ntAPPRIS ALT2 TSL 3 BASIC18.23■□□□□ 0.51
CDCP2Q5VXM1 REXO2-220ENST00000611665 1158 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
CDCP2Q5VXM1 DNAJC11-201ENST00000294401 2210 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
CDCP2Q5VXM1 RFC2-213ENST00000621097 1635 ntTSL 5 BASIC18.23■□□□□ 0.51
CDCP2Q5VXM1 REV1-201ENST00000258428 4751 ntAPPRIS P3 TSL 1 (best) BASIC18.23■□□□□ 0.51
CDCP2Q5VXM1 PER3-203ENST00000377541 1524 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
CDCP2Q5VXM1 CXorf40A-208ENST00000434353 1524 ntAPPRIS ALT1 TSL 5 BASIC18.23■□□□□ 0.51
CDCP2Q5VXM1 ZSCAN1-201ENST00000282326 2054 ntAPPRIS P1 TSL 2 BASIC18.22■□□□□ 0.51
CDCP2Q5VXM1 PRKCD-202ENST00000394729 2810 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
CDCP2Q5VXM1 HOMER1-202ENST00000334082 5881 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
CDCP2Q5VXM1 ACBD4-215ENST00000592162 1684 ntTSL 5 BASIC18.22■□□□□ 0.51
CDCP2Q5VXM1 PYCR3-207ENST00000495276 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
CDCP2Q5VXM1 KCNN4-201ENST00000262888 2240 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
CDCP2Q5VXM1 EED-201ENST00000263360 2223 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
CDCP2Q5VXM1 AC009126.1-201ENST00000501338 2245 ntTSL 2 BASIC18.22■□□□□ 0.51
CDCP2Q5VXM1 ARHGAP8-202ENST00000356099 1584 ntAPPRIS P3 TSL 1 (best) BASIC18.22■□□□□ 0.51
CDCP2Q5VXM1 YPEL3-202ENST00000398841 1588 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
CDCP2Q5VXM1 POLR2F-205ENST00000442738 2106 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
CDCP2Q5VXM1 CYB561-204ENST00000448884 1496 ntTSL 2 BASIC18.22■□□□□ 0.51
CDCP2Q5VXM1 OGFOD2-205ENST00000454694 1488 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
CDCP2Q5VXM1 AL691432.2-201ENST00000607222 2038 ntBASIC18.22■□□□□ 0.51
CDCP2Q5VXM1 C7orf25-201ENST00000350427 2451 ntAPPRIS P1 TSL 2 BASIC18.22■□□□□ 0.51
CDCP2Q5VXM1 CKMT1A-202ENST00000413453 1911 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
CDCP2Q5VXM1 CXCL12-204ENST00000395793 665 ntTSL 5 BASIC18.22■□□□□ 0.51
CDCP2Q5VXM1 MIR3652-201ENST00000579335 131 ntBASIC18.22■□□□□ 0.51
CDCP2Q5VXM1 PRR29-207ENST00000580752 458 ntTSL 3 BASIC18.22■□□□□ 0.51
CDCP2Q5VXM1 CYP2D7-203ENST00000433992 1740 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
CDCP2Q5VXM1 CYP2D7-207ENST00000612115 1734 ntAPPRIS P1 TSL 5 BASIC18.22■□□□□ 0.51
CDCP2Q5VXM1 SLC22A18-202ENST00000347936 1542 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
CDCP2Q5VXM1 RAP1GDS1-201ENST00000264572 1686 ntTSL 5 BASIC18.22■□□□□ 0.51
CDCP2Q5VXM1 FBXO17-201ENST00000292852 2386 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
CDCP2Q5VXM1 FAM216A-201ENST00000377673 1582 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
CDCP2Q5VXM1 PHF2-201ENST00000359246 5569 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
CDCP2Q5VXM1 GPR42-201ENST00000454971 1804 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
CDCP2Q5VXM1 NAT6-204ENST00000443094 1464 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
CDCP2Q5VXM1 MATN4-204ENST00000372756 2077 ntAPPRIS P2 TSL 1 (best) BASIC18.21■□□□□ 0.51
CDCP2Q5VXM1 NCLN-205ENST00000590671 2070 ntTSL 2 BASIC18.21■□□□□ 0.51
CDCP2Q5VXM1 DET1-207ENST00000564406 2315 ntTSL 2 BASIC18.21■□□□□ 0.51
CDCP2Q5VXM1 SLC50A1-201ENST00000303343 1137 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
CDCP2Q5VXM1 CENPX-201ENST00000306704 751 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
CDCP2Q5VXM1 AL603832.1-201ENST00000421943 449 ntTSL 5 BASIC18.21■□□□□ 0.51
CDCP2Q5VXM1 RPL29-202ENST00000466397 742 ntAPPRIS P1 TSL 2 BASIC18.21■□□□□ 0.51
CDCP2Q5VXM1 HELT-202ENST00000505610 846 ntAPPRIS ALT1 TSL 1 (best) BASIC18.21■□□□□ 0.51
CDCP2Q5VXM1 LINC02106-201ENST00000506534 606 ntTSL 2 BASIC18.21■□□□□ 0.51
CDCP2Q5VXM1 SKP2-204ENST00000508514 821 ntTSL 3 BASIC18.21■□□□□ 0.51
CDCP2Q5VXM1 SDHD-206ENST00000528182 754 ntTSL 3 BASIC18.21■□□□□ 0.51
CDCP2Q5VXM1 AC011773.3-202ENST00000549291 790 ntTSL 3 BASIC18.21■□□□□ 0.51
CDCP2Q5VXM1 HOXB8-203ENST00000576562 743 ntAPPRIS ALT1 TSL 2 BASIC18.21■□□□□ 0.51
CDCP2Q5VXM1 AC092329.2-201ENST00000598402 547 ntBASIC18.21■□□□□ 0.51
CDCP2Q5VXM1 TUBA8-201ENST00000316027 1518 ntTSL 2 BASIC18.21■□□□□ 0.51
CDCP2Q5VXM1 PLAUR-203ENST00000340093 1548 ntAPPRIS P3 TSL 1 (best) BASIC18.21■□□□□ 0.51
CDCP2Q5VXM1 PPP1R13B-201ENST00000202556 4958 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
CDCP2Q5VXM1 SCFD2-204ENST00000611795 1320 ntTSL 5 BASIC18.21■□□□□ 0.51
CDCP2Q5VXM1 FOXK2-201ENST00000335255 5265 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.5
CDCP2Q5VXM1 ACTG1-201ENST00000331925 1994 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.5
CDCP2Q5VXM1 DPF1-217ENST00000614244 2356 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
CDCP2Q5VXM1 LSM14A-202ENST00000540746 2152 ntTSL 2 BASIC18.2■□□□□ 0.5
CDCP2Q5VXM1 BCKDK-202ENST00000287507 1907 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
CDCP2Q5VXM1 ZNF668-209ENST00000539836 2469 ntTSL 5 BASIC18.2■□□□□ 0.5
CDCP2Q5VXM1 TBC1D7-202ENST00000356436 1116 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
CDCP2Q5VXM1 TBC1D7-204ENST00000379300 1276 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
CDCP2Q5VXM1 AL359747.1-201ENST00000442370 536 ntTSL 2 BASIC18.2■□□□□ 0.5
CDCP2Q5VXM1 YPEL3-204ENST00000563788 730 ntAPPRIS P1 TSL 3 BASIC18.2■□□□□ 0.5
CDCP2Q5VXM1 MIR3180-1-201ENST00000580374 94 ntBASIC18.2■□□□□ 0.5
CDCP2Q5VXM1 MIR3180-3-201ENST00000584616 94 ntBASIC18.2■□□□□ 0.5
CDCP2Q5VXM1 ATP5D-207ENST00000591660 637 ntAPPRIS P1 TSL 3 BASIC18.2■□□□□ 0.5
CDCP2Q5VXM1 DNAJB6-218ENST00000634080 1005 ntTSL 2 BASIC18.2■□□□□ 0.5
CDCP2Q5VXM1 NDUFAB1-201ENST00000007516 717 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
CDCP2Q5VXM1 C6orf136-203ENST00000376473 1402 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
CDCP2Q5VXM1 DNAJB11-202ENST00000439351 2398 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
CDCP2Q5VXM1 KLHDC4-227ENST00000622456 1422 ntTSL 5 BASIC18.2■□□□□ 0.5
CDCP2Q5VXM1 PFKFB3-217ENST00000626882 1965 ntTSL 5 BASIC18.2■□□□□ 0.5
CDCP2Q5VXM1 RBM14-RBM4-201ENST00000412278 1566 ntAPPRIS P1 TSL 2 BASIC18.2■□□□□ 0.5
CDCP2Q5VXM1 MYL5-206ENST00000506838 2956 ntTSL 2 BASIC18.2■□□□□ 0.5
CDCP2Q5VXM1 ZGPAT-203ENST00000357119 1896 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
CDCP2Q5VXM1 BTBD9-205ENST00000419706 2034 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
CDCP2Q5VXM1 PAQR6-213ENST00000612424 2037 ntTSL 2 BASIC18.2■□□□□ 0.5
CDCP2Q5VXM1 EFHC1-206ENST00000635760 2030 ntTSL 5 BASIC18.2■□□□□ 0.5
CDCP2Q5VXM1 KLC2-207ENST00000421552 2721 ntTSL 5 BASIC18.2■□□□□ 0.5
CDCP2Q5VXM1 NR1H2-202ENST00000411902 1466 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
CDCP2Q5VXM1 ME3-212ENST00000543262 2311 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
CDCP2Q5VXM1 DOK2-201ENST00000276420 1936 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
CDCP2Q5VXM1 AC140125.2-201ENST00000502515 1517 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
CDCP2Q5VXM1 AGAP2-AS1-201ENST00000542466 1500 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
CDCP2Q5VXM1 SPRN-201ENST00000414069 3128 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
CDCP2Q5VXM1 KCNK4-202ENST00000422670 1697 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
CDCP2Q5VXM1 SSR1-204ENST00000474597 1808 ntTSL 5 BASIC18.19■□□□□ 0.5
CDCP2Q5VXM1 NDUFS7-201ENST00000233627 1039 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
CDCP2Q5VXM1 PRDX3-201ENST00000298510 1591 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 65.5 ms