Protein–RNA interactions for Protein: Q2NKX8

ERCC6L, DNA excision repair protein ERCC-6-like, humanhuman

Predictions only

Length 1,250 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC6LQ2NKX8 ARL6IP4-204ENST00000392435 1339 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
ERCC6LQ2NKX8 NPAS1-207ENST00000602189 1643 ntTSL 5 BASIC20.32■□□□□ 0.84
ERCC6LQ2NKX8 PIGQ-204ENST00000409527 1915 ntAPPRIS P1 TSL 2 BASIC20.32■□□□□ 0.84
ERCC6LQ2NKX8 MCOLN1-201ENST00000264079 2082 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
ERCC6LQ2NKX8 TMEM218-201ENST00000279968 1034 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
ERCC6LQ2NKX8 CLIC6-201ENST00000349499 3806 ntAPPRIS P3 TSL 1 (best) BASIC20.32■□□□□ 0.84
ERCC6LQ2NKX8 ARHGAP24-206ENST00000503995 1273 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
ERCC6LQ2NKX8 SFTPC-205ENST00000521315 1046 ntAPPRIS ALT1 TSL 1 (best) BASIC20.32■□□□□ 0.84
ERCC6LQ2NKX8 AP003071.3-201ENST00000562506 366 ntTSL 3 BASIC20.32■□□□□ 0.84
ERCC6LQ2NKX8 ACAP1-206ENST00000571471 320 ntTSL 2 BASIC20.32■□□□□ 0.84
ERCC6LQ2NKX8 RPL17-204ENST00000579248 790 ntAPPRIS P1 TSL 2 BASIC20.32■□□□□ 0.84
ERCC6LQ2NKX8 ABHD1-207ENST00000621324 1078 ntTSL 5 BASIC20.32■□□□□ 0.84
ERCC6LQ2NKX8 STX17-205ENST00000525640 2523 ntAPPRIS P1 TSL 2 BASIC20.32■□□□□ 0.84
ERCC6LQ2NKX8 GSR-201ENST00000221130 3119 ntAPPRIS P3 TSL 1 (best) BASIC20.32■□□□□ 0.84
ERCC6LQ2NKX8 HOXC11-201ENST00000243082 2039 ntTSL 3 BASIC20.32■□□□□ 0.84
ERCC6LQ2NKX8 ICA1-201ENST00000265577 2309 ntAPPRIS ALT1 TSL 5 BASIC20.32■□□□□ 0.84
ERCC6LQ2NKX8 GRB10-208ENST00000403097 5432 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
ERCC6LQ2NKX8 GGT3P-201ENST00000412448 2340 ntTSL 2 BASIC20.32■□□□□ 0.84
ERCC6LQ2NKX8 TSLP-203ENST00000420978 2621 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
ERCC6LQ2NKX8 TRAM1-201ENST00000262213 2785 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
ERCC6LQ2NKX8 INPP4A-204ENST00000409540 3231 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
ERCC6LQ2NKX8 SPTBN4-204ENST00000392025 8671 ntAPPRIS ALT1 TSL 5 BASIC20.32■□□□□ 0.84
ERCC6LQ2NKX8 HOXD10-201ENST00000249501 1989 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
ERCC6LQ2NKX8 TMPRSS5-205ENST00000538955 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
ERCC6LQ2NKX8 P2RX5-203ENST00000547178 1998 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
ERCC6LQ2NKX8 KANSL2-212ENST00000550347 2714 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
ERCC6LQ2NKX8 MAEA-201ENST00000264750 2058 ntTSL 2 BASIC20.31■□□□□ 0.84
ERCC6LQ2NKX8 SALRNA1-201ENST00000555871 2086 ntTSL 4 BASIC20.31■□□□□ 0.84
ERCC6LQ2NKX8 SNRPA-201ENST00000243563 1621 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
ERCC6LQ2NKX8 SPRYD7-201ENST00000361840 3053 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
ERCC6LQ2NKX8 C4orf32-201ENST00000309733 8901 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
ERCC6LQ2NKX8 ZBTB44-201ENST00000357899 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
ERCC6LQ2NKX8 HCLS1-201ENST00000314583 2000 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
ERCC6LQ2NKX8 CALHM2-201ENST00000260743 1859 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
ERCC6LQ2NKX8 XRCC3-201ENST00000352127 2563 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
ERCC6LQ2NKX8 TCF3-204ENST00000453954 3585 ntTSL 5 BASIC20.31■□□□□ 0.84
ERCC6LQ2NKX8 PIANP-204ENST00000540656 2432 ntAPPRIS P3 TSL 2 BASIC20.31■□□□□ 0.84
ERCC6LQ2NKX8 ALKBH4-201ENST00000292566 2105 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
ERCC6LQ2NKX8 INPP5A-203ENST00000368594 2967 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
ERCC6LQ2NKX8 ZDHHC16-205ENST00000370846 1280 ntTSL 3 BASIC20.31■□□□□ 0.84
ERCC6LQ2NKX8 PPCS-202ENST00000372560 793 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
ERCC6LQ2NKX8 MANBAL-202ENST00000373606 1208 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
ERCC6LQ2NKX8 VMO1-204ENST00000441199 741 ntTSL 2 BASIC20.31■□□□□ 0.84
ERCC6LQ2NKX8 CAMTA1-208ENST00000473578 567 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
ERCC6LQ2NKX8 AC012414.1-201ENST00000556676 535 ntBASIC20.31■□□□□ 0.84
ERCC6LQ2NKX8 WSCD1-209ENST00000574232 2129 ntAPPRIS P1 TSL 5 BASIC20.31■□□□□ 0.84
ERCC6LQ2NKX8 IGSF9B-206ENST00000533871 5050 ntAPPRIS P2 TSL 5 BASIC20.31■□□□□ 0.84
ERCC6LQ2NKX8 ADSL-202ENST00000342312 1808 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
ERCC6LQ2NKX8 SP3-203ENST00000418194 3937 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
ERCC6LQ2NKX8 ACOXL-205ENST00000439055 2373 ntTSL 2 BASIC20.31■□□□□ 0.84
ERCC6LQ2NKX8 NR2F1-201ENST00000327111 3732 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
ERCC6LQ2NKX8 FAM87B-201ENST00000326734 1947 ntTSL 2 BASIC20.31■□□□□ 0.84
ERCC6LQ2NKX8 LMNA-207ENST00000368301 2461 ntTSL 2 BASIC20.31■□□□□ 0.84
ERCC6LQ2NKX8 AC018755.2-202ENST00000429354 1926 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
ERCC6LQ2NKX8 CCNA1-202ENST00000440264 1758 ntAPPRIS P1 TSL 2 BASIC20.31■□□□□ 0.84
ERCC6LQ2NKX8 DOC2A-208ENST00000564944 1782 ntAPPRIS P1 TSL 5 BASIC20.31■□□□□ 0.84
ERCC6LQ2NKX8 KLC2-203ENST00000394066 2591 ntTSL 2 BASIC20.31■□□□□ 0.84
ERCC6LQ2NKX8 AP001273.2-201ENST00000638767 2993 ntAPPRIS P1 TSL 5 BASIC20.31■□□□□ 0.84
ERCC6LQ2NKX8 UTP18-201ENST00000225298 1894 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
ERCC6LQ2NKX8 MAPRE3-201ENST00000233121 1892 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
ERCC6LQ2NKX8 GCH1-204ENST00000491895 2943 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
ERCC6LQ2NKX8 SKOR1-204ENST00000554240 3597 ntAPPRIS ALT2 TSL 5 BASIC20.3■□□□□ 0.84
ERCC6LQ2NKX8 SLC44A3-201ENST00000271227 2388 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
ERCC6LQ2NKX8 APCDD1-201ENST00000355285 3809 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
ERCC6LQ2NKX8 SCARB1-211ENST00000546215 1597 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
ERCC6LQ2NKX8 HEXDC-203ENST00000577944 1820 ntTSL 5 BASIC20.3■□□□□ 0.84
ERCC6LQ2NKX8 MMP17-206ENST00000535291 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
ERCC6LQ2NKX8 EDA-201ENST00000338901 1233 ntBASIC20.3■□□□□ 0.84
ERCC6LQ2NKX8 AL121761.1-202ENST00000412571 415 ntTSL 2 BASIC20.3■□□□□ 0.84
ERCC6LQ2NKX8 AC099791.1-201ENST00000416440 715 ntBASIC20.3■□□□□ 0.84
ERCC6LQ2NKX8 HTATIP2-208ENST00000532505 595 ntTSL 2 BASIC20.3■□□□□ 0.84
ERCC6LQ2NKX8 AL359317.1-201ENST00000556316 578 ntTSL 4 BASIC20.3■□□□□ 0.84
ERCC6LQ2NKX8 AC093249.6-202ENST00000568500 1142 ntTSL 2 BASIC20.3■□□□□ 0.84
ERCC6LQ2NKX8 AL139246.5-201ENST00000606645 996 ntBASIC20.3■□□□□ 0.84
ERCC6LQ2NKX8 BAG1-212ENST00000641048 1038 ntAPPRIS P3 BASIC20.3■□□□□ 0.84
ERCC6LQ2NKX8 CASP6-201ENST00000265164 1548 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
ERCC6LQ2NKX8 ZNF534-201ENST00000301085 1525 ntTSL 2 BASIC20.3■□□□□ 0.84
ERCC6LQ2NKX8 SSUH2-202ENST00000341795 1799 ntAPPRIS P3 TSL 1 (best) BASIC20.3■□□□□ 0.84
ERCC6LQ2NKX8 EXTL3-213ENST00000523149 1779 ntTSL 5 BASIC20.3■□□□□ 0.84
ERCC6LQ2NKX8 A4GALT-201ENST00000249005 2020 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
ERCC6LQ2NKX8 GPC2-201ENST00000292377 2532 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
ERCC6LQ2NKX8 STAMBPL1-203ENST00000371926 2532 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
ERCC6LQ2NKX8 NADSYN1-201ENST00000319023 2773 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
ERCC6LQ2NKX8 EEPD1-201ENST00000242108 4765 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
ERCC6LQ2NKX8 CEP78-204ENST00000415759 2623 ntAPPRIS ALT2 TSL 5 BASIC20.3■□□□□ 0.84
ERCC6LQ2NKX8 TXNRD3-202ENST00000523403 2351 ntAPPRIS ALT2 TSL 2 BASIC20.3■□□□□ 0.84
ERCC6LQ2NKX8 ETV4-204ENST00000545089 1628 ntTSL 2 BASIC20.3■□□□□ 0.84
ERCC6LQ2NKX8 KCNMA1-278ENST00000640141 5705 ntAPPRIS ALT2 TSL 5 BASIC20.3■□□□□ 0.84
ERCC6LQ2NKX8 KCNQ1-201ENST00000155840 3245 ntAPPRIS P2 TSL 1 (best) BASIC20.3■□□□□ 0.84
ERCC6LQ2NKX8 PTPA-203ENST00000348141 2737 ntTSL 5 BASIC20.3■□□□□ 0.84
ERCC6LQ2NKX8 PTPA-207ENST00000393370 2737 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
ERCC6LQ2NKX8 SH2D3C-213ENST00000629203 2478 ntTSL 2 BASIC20.3■□□□□ 0.84
ERCC6LQ2NKX8 MECP2-205ENST00000453960 1729 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
ERCC6LQ2NKX8 TBL2-201ENST00000305632 3161 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
ERCC6LQ2NKX8 ARSA-201ENST00000216124 2050 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
ERCC6LQ2NKX8 BFSP1-205ENST00000536626 2075 ntTSL 2 BASIC20.3■□□□□ 0.84
ERCC6LQ2NKX8 DVL2-209ENST00000575458 2659 ntAPPRIS ALT2 TSL 2 BASIC20.3■□□□□ 0.84
ERCC6LQ2NKX8 LHX3-203ENST00000619587 2698 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
ERCC6LQ2NKX8 NPEPL1-204ENST00000525967 1917 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
ERCC6LQ2NKX8 C14orf180-202ENST00000410013 2009 ntAPPRIS P3 TSL 1 (best) BASIC20.29■□□□□ 0.84
Retrieved 100 of 98,524 protein–RNA pairs in 32.5 ms