Protein–RNA interactions for Protein: P83369

LSM11, U7 snRNA-associated Sm-like protein LSm11, humanhuman

Known RBP eCLIP

Length 360 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LSM11P83369 ACBD4-201ENST00000321854 1806 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.612e-8■□□□□ 10.8
LSM11P83369 ACBD4-204ENST00000431281 2026 ntTSL 5 BASIC18.39■□□□□ 0.532e-8■□□□□ 10.8
LSM11P83369 ACBD4-203ENST00000398322 1986 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.532e-8■□□□□ 10.8
LSM11P83369 ACBD4-205ENST00000585553 2241 ntTSL 217.7■□□□□ 0.422e-8■□□□□ 10.8
LSM11P83369 ACBD4-215ENST00000592162 1684 ntTSL 5 BASIC17.03■□□□□ 0.322e-8■□□□□ 10.8
LSM11P83369 ACADVL-213ENST00000578579 458 ntTSL 36.43□□□□□ -1.382e-9■□□□□ 10.8
LSM11P83369 FGFR1-214ENST00000447712 5900 ntAPPRIS P3 TSL 1 (best) BASIC17.83■□□□□ 0.442e-6■□□□□ 10.8
LSM11P83369 FGFR1-241ENST00000619564 5482 ntTSL 5 BASIC17.71■□□□□ 0.432e-6■□□□□ 10.8
LSM11P83369 FGFR1-238ENST00000532791 5590 ntAPPRIS ALT1 TSL 5 BASIC17.22■□□□□ 0.352e-6■□□□□ 10.8
LSM11P83369 FGFR1-203ENST00000341462 6054 ntTSL 5 BASIC16.37■□□□□ 0.212e-6■□□□□ 10.8
LSM11P83369 FGFR1-206ENST00000397091 5702 ntAPPRIS ALT1 TSL 1 (best) BASIC15.33■□□□□ 0.052e-6■□□□□ 10.8
LSM11P83369 FGFR1-201ENST00000326324 3816 ntTSL 1 (best) BASIC13.84□□□□□ -0.192e-6■□□□□ 10.8
LSM11P83369 FGFR1-204ENST00000356207 3824 ntTSL 1 (best) BASIC13.84□□□□□ -0.192e-6■□□□□ 10.8
LSM11P83369 FGFR1-202ENST00000335922 4157 ntTSL 1 (best) BASIC13.66□□□□□ -0.222e-6■□□□□ 10.8
LSM11P83369 FGFR1-207ENST00000397103 2953 ntTSL 5 BASIC11.85□□□□□ -0.512e-6■□□□□ 10.8
LSM11P83369 FGFR1-228ENST00000526688 570 ntTSL 311.83□□□□□ -0.522e-6■□□□□ 10.8
LSM11P83369 FGFR1-211ENST00000425967 5375 ntTSL 1 (best) BASIC11.14□□□□□ -0.632e-6■□□□□ 10.8
LSM11P83369 FGFR1-227ENST00000526570 5528 ntTSL 1 (best)10.91□□□□□ -0.662e-6■□□□□ 10.8
LSM11P83369 FGFR1-209ENST00000397113 3680 ntAPPRIS ALT1 TSL 2 BASIC9.77□□□□□ -0.852e-6■□□□□ 10.8
LSM11P83369 RBM25-201ENST00000261973 6910 ntAPPRIS P1 TSL 1 (best) BASIC6.82□□□□□ -1.322e-7■□□□□ 10.8
LSM11P83369 RBM25-206ENST00000527449 3469 ntTSL 1 (best)4.39□□□□□ -1.712e-7■□□□□ 10.8
LSM11P83369 PABPC1L-215ENST00000489068 442 ntTSL 310.48□□□□□ -0.731e-7■□□□□ 10.8
LSM11P83369 AC079466.1-201ENST00000587961 4453 ntTSL 2 BASIC8.37□□□□□ -1.071e-11■□□□□ 10.8
LSM11P83369 GOLGA2-213ENST00000610329 2212 ntTSL 2 BASIC15.82■□□□□ 0.121e-6■□□□□ 10.8
LSM11P83369 GOLGA2-214ENST00000611957 4259 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.711e-6■□□□□ 10.8
LSM11P83369 GOLGA2-201ENST00000421699 4260 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.811e-6■□□□□ 10.8
LSM11P83369 PFKP-202ENST00000381075 2769 ntTSL 2 BASIC16.1■□□□□ 0.173e-9■□□□□ 10.8
LSM11P83369 VARS-215ENST00000375663 4312 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.051e-7■□□□□ 10.8
LSM11P83369 PFKP-203ENST00000381125 2654 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.293e-9■□□□□ 10.8
LSM11P83369 PFKP-205ENST00000413079 496 ntTSL 312.19□□□□□ -0.463e-9■□□□□ 10.8
LSM11P83369 SH2B1-205ENST00000538342 1532 ntTSL 2 BASIC21.92■■□□□ 1.16e-12■□□□□ 10.8
LSM11P83369 LTBP3-220ENST00000532661 748 ntTSL 319.87■□□□□ 0.773e-7■□□□□ 10.8
LSM11P83369 SH2B1-215ENST00000569651 821 ntTSL 517.46■□□□□ 0.396e-12■□□□□ 10.8
LSM11P83369 TTC31-201ENST00000233623 3235 ntAPPRIS P2 TSL 1 (best) BASIC10.13□□□□□ -0.798e-7■□□□□ 10.8
LSM11P83369 TTC31-204ENST00000424122 2806 ntTSL 1 (best)10.03□□□□□ -0.88e-7■□□□□ 10.8
LSM11P83369 TTC31-213ENST00000491252 3860 ntTSL 29.75□□□□□ -0.858e-7■□□□□ 10.8
LSM11P83369 TTC31-202ENST00000410003 3358 ntTSL 1 (best) BASIC9.41□□□□□ -0.98e-7■□□□□ 10.8
LSM11P83369 TTC31-212ENST00000489152 4025 ntTSL 29.16□□□□□ -0.948e-7■□□□□ 10.8
LSM11P83369 POMGNT1-201ENST00000371984 2728 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.681e-6■□□□□ 10.8
LSM11P83369 POMGNT1-205ENST00000475642 407 ntTSL 313.44□□□□□ -0.261e-6■□□□□ 10.8
LSM11P83369 POMGNT1-202ENST00000371992 2934 ntTSL 2 BASIC10.63□□□□□ -0.711e-6■□□□□ 10.8
LSM11P83369 POMGNT1-203ENST00000396420 3480 ntTSL 2 BASIC10.25□□□□□ -0.771e-6■□□□□ 10.8
LSM11P83369 PI4KAP1-201ENST00000610959 2425 ntTSL 2 BASIC15.37■□□□□ 0.052e-10■□□□□ 10.8
LSM11P83369 PI4KAP1-204ENST00000612579 1703 ntBASIC15.26■□□□□ 0.032e-10■□□□□ 10.8
LSM11P83369 PI4KAP1-206ENST00000617243 2340 ntTSL 515.21■□□□□ 0.032e-10■□□□□ 10.8
LSM11P83369 PI4KAP1-207ENST00000618794 2553 ntTSL 1 (best)15.19■□□□□ 0.022e-10■□□□□ 10.8
LSM11P83369 PI4KAP1-208ENST00000619742 1787 ntTSL 214.47□□□□□ -0.092e-10■□□□□ 10.8
LSM11P83369 EWSR1-221ENST00000610553 2300 ntTSL 216.12■□□□□ 0.174e-9■□□□□ 10.8
LSM11P83369 SPPL2B-207ENST00000610743 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.135e-7■□□□□ 10.8
LSM11P83369 SPPL2B-209ENST00000613503 3456 ntAPPRIS P4 TSL 1 (best) BASIC13.12□□□□□ -0.315e-7■□□□□ 10.8
LSM11P83369 AP1G2-216ENST00000554982 716 ntTSL 411.24□□□□□ -0.616e-10■□□□□ 10.8
LSM11P83369 MRNIP-215ENST00000521299 868 ntTSL 514.28□□□□□ -0.128e-11■□□□□ 10.8
LSM11P83369 TRIM25-202ENST00000537230 2906 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.468e-6■□□□□ 10.8
LSM11P83369 TRIM25-207ENST00000573108 952 ntTSL 310.55□□□□□ -0.728e-6■□□□□ 10.8
LSM11P83369 MRNIP-216ENST00000521333 410 ntAPPRIS ALT2 TSL 5 BASIC10.46□□□□□ -0.738e-11■□□□□ 10.8
LSM11P83369 PLXNB1-204ENST00000456774 5859 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.395e-7■□□□□ 10.8
LSM11P83369 QARS-249ENST00000637113 1369 ntTSL 514.51□□□□□ -0.092e-6■□□□□ 10.8
LSM11P83369 QARS-205ENST00000430182 2399 ntTSL 211.99□□□□□ -0.492e-6■□□□□ 10.8
LSM11P83369 QARS-208ENST00000459870 1317 ntTSL 511.91□□□□□ -0.52e-6■□□□□ 10.8
LSM11P83369 QARS-202ENST00000414533 2412 ntTSL 2 BASIC11.59□□□□□ -0.552e-6■□□□□ 10.8
LSM11P83369 QARS-248ENST00000636669 2410 ntTSL 511.25□□□□□ -0.612e-6■□□□□ 10.8
LSM11P83369 QARS-211ENST00000470113 954 ntTSL 511.1□□□□□ -0.632e-6■□□□□ 10.8
LSM11P83369 QARS-216ENST00000482248 887 ntTSL 510.65□□□□□ -0.72e-6■□□□□ 10.8
LSM11P83369 QARS-247ENST00000636018 2171 ntTSL 510.15□□□□□ -0.782e-6■□□□□ 10.8
LSM11P83369 QARS-225ENST00000634336 486 ntTSL 59.93□□□□□ -0.822e-6■□□□□ 10.8
LSM11P83369 QARS-209ENST00000464962 2362 ntTSL 1 (best) BASIC9.88□□□□□ -0.832e-6■□□□□ 10.8
LSM11P83369 QARS-201ENST00000306125 2827 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.842e-6■□□□□ 10.8
LSM11P83369 QARS-229ENST00000634473 643 ntTSL 59.32□□□□□ -0.922e-6■□□□□ 10.8
LSM11P83369 QARS-224ENST00000497635 386 ntTSL 39.26□□□□□ -0.932e-6■□□□□ 10.8
LSM11P83369 QARS-223ENST00000494984 679 ntTSL 28.29□□□□□ -1.082e-6■□□□□ 10.8
LSM11P83369 QARS-207ENST00000453392 859 ntTSL 58.2□□□□□ -1.12e-6■□□□□ 10.8
LSM11P83369 QARS-250ENST00000637281 1327 ntTSL 56.04□□□□□ -1.442e-6■□□□□ 10.8
LSM11P83369 QARS-210ENST00000466179 334 ntTSL 34.64□□□□□ -1.672e-6■□□□□ 10.8
LSM11P83369 FANCL-206ENST00000427708 864 ntTSL 511.37□□□□□ -0.594e-11■□□□□ 10.8
LSM11P83369 FANCL-205ENST00000417361 545 ntTSL 310.99□□□□□ -0.654e-11■□□□□ 10.8
LSM11P83369 FANCL-208ENST00000449070 964 ntTSL 1 (best)9.77□□□□□ -0.854e-11■□□□□ 10.8
LSM11P83369 FANCL-207ENST00000446381 487 ntTSL 59.2□□□□□ -0.944e-11■□□□□ 10.8
LSM11P83369 FANCL-204ENST00000403676 849 ntTSL 3 BASIC8.26□□□□□ -1.094e-11■□□□□ 10.8
LSM11P83369 EXOC3L4-201ENST00000380069 2293 ntAPPRIS P1 TSL 1 (best) BASIC24.62■■□□□ 1.533e-12■□□□□ 10.7
LSM11P83369 FAR2P1-206ENST00000449736 709 ntBASIC9.18□□□□□ -0.943e-6■□□□□ 10.7
LSM11P83369 FAR2P1-201ENST00000325390 3679 ntTSL 5 BASIC6.92□□□□□ -1.33e-6■□□□□ 10.7
LSM11P83369 RBM14-204ENST00000409738 372 ntTSL 1 (best) BASIC11.78□□□□□ -0.528e-9■□□□□ 10.7
LSM11P83369 PCYT2-208ENST00000571944 366 ntTSL 311.42□□□□□ -0.584e-8■□□□□ 10.7
LSM11P83369 DYNC1H1-204ENST00000555062 1351 ntTSL 216.88■□□□□ 0.292e-6■□□□□ 10.7
LSM11P83369 DYNC1H1-201ENST00000360184 14333 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.912e-6■□□□□ 10.7
LSM11P83369 GSDMD-208ENST00000528475 2067 ntTSL 222.02■■□□□ 1.112e-6■□□□□ 10.7
LSM11P83369 GSDMD-207ENST00000526469 1643 ntTSL 221.09■□□□□ 0.972e-6■□□□□ 10.7
LSM11P83369 GSDMD-211ENST00000531184 2213 ntTSL 219.08■□□□□ 0.642e-6■□□□□ 10.7
LSM11P83369 GSDMD-212ENST00000533063 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.572e-6■□□□□ 10.7
LSM11P83369 GSDMD-203ENST00000525208 691 ntTSL 318.18■□□□□ 0.52e-6■□□□□ 10.7
LSM11P83369 GSDMD-206ENST00000526406 2496 ntAPPRIS P2 TSL 2 BASIC17.06■□□□□ 0.322e-6■□□□□ 10.7
LSM11P83369 GSDMD-201ENST00000262580 1762 ntAPPRIS P2 TSL 1 (best) BASIC16.94■□□□□ 0.32e-6■□□□□ 10.7
LSM11P83369 GSDMD-202ENST00000524846 3462 ntTSL 214.54□□□□□ -0.082e-6■□□□□ 10.7
LSM11P83369 GSDMD-210ENST00000531173 854 ntTSL 214.35□□□□□ -0.112e-6■□□□□ 10.7
LSM11P83369 UBA1-202ENST00000377269 2497 ntTSL 2 BASIC13.43□□□□□ -0.262e-8■□□□□ 10.7
LSM11P83369 TAZ-215ENST00000612460 1793 ntAPPRIS P1 TSL 1 (best) BASIC25.53■■□□□ 1.682e-7■□□□□ 10.7
LSM11P83369 TAZ-213ENST00000601016 1889 ntTSL 1 (best) BASIC23.07■■□□□ 1.282e-7■□□□□ 10.7
LSM11P83369 TAZ-205ENST00000475699 1862 ntTSL 1 (best) BASIC22.66■■□□□ 1.222e-7■□□□□ 10.7
LSM11P83369 TAZ-201ENST00000369776 1596 ntTSL 1 (best) BASIC22.64■■□□□ 1.222e-7■□□□□ 10.7
LSM11P83369 TAZ-216ENST00000613002 1485 ntTSL 1 (best) BASIC21.44■■□□□ 1.022e-7■□□□□ 10.7
Retrieved 100 of 11,495 protein–RNA pairs in 59.6 ms