Protein–RNA interactions for Protein: P62995

TRA2B, Transformer-2 protein homolog beta, humanhuman

Known RBP Predictions only

Length 288 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2BP62995 MCAT-202ENST00000327555 1134 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
TRA2BP62995 RALGPS1-206ENST00000394011 819 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
TRA2BP62995 RAB29-203ENST00000414729 1157 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
TRA2BP62995 AC004980.1-204ENST00000429707 299 ntBASIC18.12■□□□□ 0.49
TRA2BP62995 TSPY23P-201ENST00000440136 739 ntBASIC18.12■□□□□ 0.49
TRA2BP62995 PPP1R14BP5-201ENST00000440334 435 ntBASIC18.12■□□□□ 0.49
TRA2BP62995 AC073050.1-201ENST00000442316 462 ntTSL 3 BASIC18.12■□□□□ 0.49
TRA2BP62995 BABAM1-202ENST00000447614 930 ntAPPRIS ALT2 TSL 5 BASIC18.12■□□□□ 0.49
TRA2BP62995 HLX-AS1-201ENST00000552026 563 ntTSL 4 BASIC18.12■□□□□ 0.49
TRA2BP62995 AC007493.2-201ENST00000568427 478 ntTSL 3 BASIC18.12■□□□□ 0.49
TRA2BP62995 FAM197Y4-202ENST00000622692 608 ntBASIC18.12■□□□□ 0.49
TRA2BP62995 AC004816.2-201ENST00000622856 284 ntTSL 5 BASIC18.12■□□□□ 0.49
TRA2BP62995 POU3F2-201ENST00000328345 4879 ntAPPRIS P1 BASIC18.12■□□□□ 0.49
TRA2BP62995 RAB7A-201ENST00000265062 2244 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
TRA2BP62995 C2orf81-201ENST00000290390 2227 ntAPPRIS P5 TSL 5 BASIC18.12■□□□□ 0.49
TRA2BP62995 THAP7-AS1-203ENST00000452284 2298 ntTSL 2 BASIC18.12■□□□□ 0.49
TRA2BP62995 CSF1-203ENST00000369801 1364 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
TRA2BP62995 GAS6-201ENST00000327773 2490 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
TRA2BP62995 PNKP-207ENST00000596014 1665 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
TRA2BP62995 CYP2F1-201ENST00000331105 1720 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
TRA2BP62995 SNAI3-201ENST00000332281 1732 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
TRA2BP62995 TLE3-201ENST00000317509 5207 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
TRA2BP62995 SNRPN-207ENST00000554227 1763 ntTSL 5 BASIC18.12■□□□□ 0.49
TRA2BP62995 STOML1-209ENST00000564777 1849 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
TRA2BP62995 ANXA8L1-203ENST00000613703 1874 ntTSL 2 BASIC18.12■□□□□ 0.49
TRA2BP62995 CMTM7-201ENST00000334983 2038 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
TRA2BP62995 ALG9-214ENST00000614444 2028 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
TRA2BP62995 DACT2-204ENST00000610183 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
TRA2BP62995 ATIC-205ENST00000435675 2275 ntTSL 2 BASIC18.11■□□□□ 0.49
TRA2BP62995 PGM1-205ENST00000540265 2345 ntTSL 2 BASIC18.11■□□□□ 0.49
TRA2BP62995 TMEM8A-204ENST00000431232 3691 ntAPPRIS P2 TSL 1 (best) BASIC18.11■□□□□ 0.49
TRA2BP62995 PDCD2-202ENST00000392090 936 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
TRA2BP62995 IL15RA-208ENST00000397251 1046 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
TRA2BP62995 ANKRD54-204ENST00000411961 946 ntTSL 5 BASIC18.11■□□□□ 0.49
TRA2BP62995 DMRT2-206ENST00000412350 1244 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
TRA2BP62995 ABCC5-211ENST00000446941 883 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
TRA2BP62995 FDX2-207ENST00000494368 584 ntTSL 4 BASIC18.11■□□□□ 0.49
TRA2BP62995 AC019257.1-201ENST00000517676 557 ntTSL 5 BASIC18.11■□□□□ 0.49
TRA2BP62995 FAM213B-215ENST00000537325 1096 ntAPPRIS ALT2 TSL 2 BASIC18.11■□□□□ 0.49
TRA2BP62995 TMEM235-204ENST00000551068 1187 ntAPPRIS P1 TSL 5 BASIC18.11■□□□□ 0.49
TRA2BP62995 AC006504.5-207ENST00000586220 487 ntTSL 2 BASIC18.11■□□□□ 0.49
TRA2BP62995 BX649632.1-201ENST00000610187 819 ntTSL 3 BASIC18.11■□□□□ 0.49
TRA2BP62995 KAZN-209ENST00000636564 1197 ntTSL 5 BASIC18.11■□□□□ 0.49
TRA2BP62995 HSD11B1L-221ENST00000583928 1319 ntTSL 5 BASIC18.11■□□□□ 0.49
TRA2BP62995 LGALS12-203ENST00000394618 1618 ntAPPRIS P3 TSL 1 (best) BASIC18.11■□□□□ 0.49
TRA2BP62995 AC026412.3-201ENST00000605200 1661 ntTSL 5 BASIC18.11■□□□□ 0.49
TRA2BP62995 SLC25A47-201ENST00000361529 1738 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
TRA2BP62995 BPTF-201ENST00000306378 9688 ntAPPRIS P2 TSL 1 (best) BASIC18.11■□□□□ 0.49
TRA2BP62995 SAMD11-211ENST00000616125 2230 ntAPPRIS ALT2 TSL 5 BASIC18.11■□□□□ 0.49
TRA2BP62995 PCDHGB3-202ENST00000618934 2445 ntAPPRIS P1 BASIC18.11■□□□□ 0.49
TRA2BP62995 C5orf47-201ENST00000340147 2522 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
TRA2BP62995 BACE2-202ENST00000330333 2993 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
TRA2BP62995 FLT1-207ENST00000615840 6453 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
TRA2BP62995 PHLDB3-201ENST00000292140 2591 ntAPPRIS P1 TSL 5 BASIC18.1■□□□□ 0.49
TRA2BP62995 HOXB9-201ENST00000311177 2581 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
TRA2BP62995 CWH43-201ENST00000226432 2472 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
TRA2BP62995 TRABD-203ENST00000395827 2172 ntAPPRIS P3 TSL 5 BASIC18.1■□□□□ 0.49
TRA2BP62995 CFAP100-203ENST00000505024 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
TRA2BP62995 ACVR1B-205ENST00000541224 1791 ntTSL 2 BASIC18.1■□□□□ 0.49
TRA2BP62995 CCND3-204ENST00000414200 1724 ntTSL 2 BASIC18.1■□□□□ 0.49
TRA2BP62995 KRT16-201ENST00000301653 1644 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
TRA2BP62995 KRT16P1-201ENST00000399124 1418 ntBASIC18.1■□□□□ 0.49
TRA2BP62995 BTNL9-210ENST00000515271 1444 ntTSL 2 BASIC18.1■□□□□ 0.49
TRA2BP62995 AL135905.2-201ENST00000584934 1404 ntBASIC18.1■□□□□ 0.49
TRA2BP62995 CTAG2-201ENST00000247306 993 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
TRA2BP62995 KRTCAP3-201ENST00000288873 872 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
TRA2BP62995 TSPAN4-209ENST00000409543 1031 ntAPPRIS P1 TSL 5 BASIC18.1■□□□□ 0.49
TRA2BP62995 NT5C3B-203ENST00000435506 975 ntAPPRIS P1 TSL 5 BASIC18.1■□□□□ 0.49
TRA2BP62995 ASH1L-AS1-202ENST00000456633 911 ntTSL 2 BASIC18.1■□□□□ 0.49
TRA2BP62995 RPS2P4-201ENST00000476944 856 ntBASIC18.1■□□□□ 0.49
TRA2BP62995 SFXN1-203ENST00000502393 637 ntTSL 2 BASIC18.1■□□□□ 0.49
TRA2BP62995 AC026271.3-201ENST00000571884 352 ntBASIC18.1■□□□□ 0.49
TRA2BP62995 AF186192.3-201ENST00000583427 947 ntBASIC18.1■□□□□ 0.49
TRA2BP62995 AC011446.2-202ENST00000592882 756 ntTSL 3 BASIC18.1■□□□□ 0.49
TRA2BP62995 AC073195.1-201ENST00000607241 877 ntBASIC18.1■□□□□ 0.49
TRA2BP62995 KIF26A-202ENST00000423312 5649 ntAPPRIS P2 TSL 5 BASIC18.1■□□□□ 0.49
TRA2BP62995 FGFR2-208ENST00000360144 3001 ntTSL 2 BASIC18.1■□□□□ 0.49
TRA2BP62995 MEN1-209ENST00000394376 3034 ntAPPRIS P3 TSL 5 BASIC18.1■□□□□ 0.49
TRA2BP62995 FOXN3-214ENST00000557258 2692 ntAPPRIS P3 TSL 1 (best) BASIC18.1■□□□□ 0.49
TRA2BP62995 SCARB1-201ENST00000261693 2611 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
TRA2BP62995 TBXA2R-201ENST00000375190 2608 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
TRA2BP62995 ITGBL1-202ENST00000376180 2494 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
TRA2BP62995 ADGRB1-201ENST00000323289 5527 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
TRA2BP62995 ZNF346-201ENST00000358149 2314 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
TRA2BP62995 LPCAT3-201ENST00000261407 2268 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
TRA2BP62995 HOXD10-201ENST00000249501 1989 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
TRA2BP62995 SLC3A2-202ENST00000377889 1993 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
TRA2BP62995 AC073107.1-201ENST00000633579 1962 ntTSL 5 BASIC18.1■□□□□ 0.49
TRA2BP62995 TRA2A-201ENST00000297071 1845 ntAPPRIS P3 TSL 1 (best) BASIC18.09■□□□□ 0.49
TRA2BP62995 SUDS3-204ENST00000543473 4897 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
TRA2BP62995 ASCC1-205ENST00000394919 2683 ntAPPRIS P1 TSL 2 BASIC18.09■□□□□ 0.49
TRA2BP62995 ADORA2A-215ENST00000618076 2630 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
TRA2BP62995 ADORA2A-201ENST00000337539 2569 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
TRA2BP62995 ACOT4-201ENST00000326303 2362 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
TRA2BP62995 GTF3A-201ENST00000381140 1383 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
TRA2BP62995 LRWD1-201ENST00000292616 2215 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
TRA2BP62995 CENPA-201ENST00000233505 1299 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
TRA2BP62995 PTMS-201ENST00000309083 1139 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
TRA2BP62995 BSX-201ENST00000343035 830 ntAPPRIS P1 TSL 5 BASIC18.09■□□□□ 0.49
TRA2BP62995 FAM131A-208ENST00000453072 1038 ntTSL 2 BASIC18.09■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 24.2 ms