Protein–RNA interactions for Protein: P59780

AP3S2, AP-3 complex subunit sigma-2, humanhuman

Predictions only

Length 193 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP3S2P59780 GUSBP5-201ENST00000418136 578 ntBASIC16.49■□□□□ 0.23
AP3S2P59780 MYL5-208ENST00000511290 781 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
AP3S2P59780 NEURL1B-203ENST00000522853 1263 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
AP3S2P59780 IGFALS-203ENST00000568221 730 ntTSL 4 BASIC16.49■□□□□ 0.23
AP3S2P59780 AC006538.2-201ENST00000586572 543 ntAPPRIS P1 TSL 4 BASIC16.49■□□□□ 0.23
AP3S2P59780 SBNO2-204ENST00000587024 4861 ntAPPRIS ALT2 TSL 2 BASIC16.49■□□□□ 0.23
AP3S2P59780 GGNBP2-210ENST00000611219 2315 ntTSL 2 BASIC16.49■□□□□ 0.23
AP3S2P59780 NDFIP1-201ENST00000253814 3851 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
AP3S2P59780 C8orf58-207ENST00000615223 1848 ntAPPRIS ALT2 TSL 5 BASIC16.49■□□□□ 0.23
AP3S2P59780 KANSL1L-203ENST00000418791 3562 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
AP3S2P59780 FLCN-203ENST00000389169 1692 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
AP3S2P59780 CASP6-201ENST00000265164 1548 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
AP3S2P59780 KRT19-201ENST00000361566 1390 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
AP3S2P59780 ANKRD13B-209ENST00000614878 2670 ntAPPRIS P1 TSL 5 BASIC16.49■□□□□ 0.23
AP3S2P59780 LHX8-201ENST00000294638 2373 ntAPPRIS P3 TSL 1 (best) BASIC16.49■□□□□ 0.23
AP3S2P59780 EGFL6-201ENST00000361306 2398 ntAPPRIS P3 TSL 1 (best) BASIC16.49■□□□□ 0.23
AP3S2P59780 GOSR2-226ENST00000639287 2367 ntTSL 5 BASIC16.49■□□□□ 0.23
AP3S2P59780 HNRNPD-201ENST00000313899 3033 ntAPPRIS P4 TSL 1 (best) BASIC16.48■□□□□ 0.23
AP3S2P59780 TBXA2R-202ENST00000411851 1494 ntTSL 2 BASIC16.48■□□□□ 0.23
AP3S2P59780 TUBA4A-201ENST00000248437 2162 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
AP3S2P59780 RETREG1-201ENST00000306320 3268 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
AP3S2P59780 SLC43A1-201ENST00000278426 2598 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
AP3S2P59780 GATB-213ENST00000515812 1893 ntTSL 5 BASIC16.48■□□□□ 0.23
AP3S2P59780 SAMD11-216ENST00000620200 1874 ntTSL 5 BASIC16.48■□□□□ 0.23
AP3S2P59780 RAB43-201ENST00000315150 4467 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
AP3S2P59780 SCARB1-211ENST00000546215 1597 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
AP3S2P59780 FAM53A-207ENST00000489363 2776 ntTSL 2 BASIC16.48■□□□□ 0.23
AP3S2P59780 HES3-201ENST00000377898 697 ntAPPRIS P1 TSL 2 BASIC16.48■□□□□ 0.23
AP3S2P59780 PRKCQ-AS1-202ENST00000445427 1133 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
AP3S2P59780 HTATIP2-208ENST00000532505 595 ntTSL 2 BASIC16.48■□□□□ 0.23
AP3S2P59780 AL354811.1-201ENST00000610286 706 ntBASIC16.48■□□□□ 0.23
AP3S2P59780 MAFF-201ENST00000338483 2490 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
AP3S2P59780 CCM2-207ENST00000475551 2471 ntAPPRIS ALT2 TSL 2 BASIC16.48■□□□□ 0.23
AP3S2P59780 AC011944.1-201ENST00000316148 1900 ntTSL 2 BASIC16.48■□□□□ 0.23
AP3S2P59780 RPS6-203ENST00000380384 1355 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
AP3S2P59780 MEPCE-202ENST00000414441 2261 ntTSL 2 BASIC16.48■□□□□ 0.23
AP3S2P59780 CHRFAM7A-202ENST00000397827 2794 ntTSL 5 BASIC16.48■□□□□ 0.23
AP3S2P59780 IGFALS-202ENST00000415638 2136 ntTSL 2 BASIC16.48■□□□□ 0.23
AP3S2P59780 CD177-203ENST00000618265 2222 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
AP3S2P59780 CFP-203ENST00000396992 1592 ntAPPRIS P2 TSL 1 (best) BASIC16.47■□□□□ 0.23
AP3S2P59780 HOXA9-201ENST00000343483 2060 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
AP3S2P59780 RAB4B-EGLN2-201ENST00000594136 2554 ntAPPRIS P1 TSL 2 BASIC16.47■□□□□ 0.23
AP3S2P59780 ENC1-207ENST00000618628 5657 ntAPPRIS P1 TSL 5 BASIC16.47■□□□□ 0.23
AP3S2P59780 SF1-203ENST00000377387 2947 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
AP3S2P59780 MBD1-206ENST00000382948 2434 ntAPPRIS P3 TSL 2 BASIC16.47■□□□□ 0.23
AP3S2P59780 PRORSD1P-202ENST00000563365 2154 ntBASIC16.47■□□□□ 0.23
AP3S2P59780 AMMECR1-201ENST00000262844 5504 ntAPPRIS P3 TSL 1 (best) BASIC16.47■□□□□ 0.23
AP3S2P59780 ISYNA1-206ENST00000578963 1691 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
AP3S2P59780 ASB6-203ENST00000450050 4535 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
AP3S2P59780 SERPINA4-201ENST00000298841 1784 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
AP3S2P59780 SHKBP1-201ENST00000291842 2363 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
AP3S2P59780 UNC93B3-201ENST00000308076 687 ntBASIC16.47■□□□□ 0.23
AP3S2P59780 NAA38-201ENST00000333775 999 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
AP3S2P59780 FOXB2-201ENST00000376708 1299 ntAPPRIS P1 BASIC16.47■□□□□ 0.23
AP3S2P59780 NT5C3AP1-201ENST00000394500 1012 ntBASIC16.47■□□□□ 0.23
AP3S2P59780 TRAPPC5-202ENST00000426877 765 ntAPPRIS P1 TSL 2 BASIC16.47■□□□□ 0.23
AP3S2P59780 AC092468.1-201ENST00000491321 562 ntTSL 4 BASIC16.47■□□□□ 0.23
AP3S2P59780 SCO2-204ENST00000543927 1051 ntAPPRIS P1 TSL 2 BASIC16.47■□□□□ 0.23
AP3S2P59780 SEC23A-213ENST00000557280 561 ntTSL 4 BASIC16.47■□□□□ 0.23
AP3S2P59780 AC093249.6-202ENST00000568500 1142 ntTSL 2 BASIC16.47■□□□□ 0.23
AP3S2P59780 ACAP1-206ENST00000571471 320 ntTSL 2 BASIC16.47■□□□□ 0.23
AP3S2P59780 AP001160.3-201ENST00000601484 763 ntBASIC16.47■□□□□ 0.23
AP3S2P59780 WBP2-219ENST00000626827 1867 ntTSL 5 BASIC16.47■□□□□ 0.23
AP3S2P59780 PLPPR4-202ENST00000370185 5369 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
AP3S2P59780 PLEKHG2-202ENST00000409797 2205 ntAPPRIS ALT2 TSL 2 BASIC16.47■□□□□ 0.23
AP3S2P59780 PCSK5-202ENST00000376767 2845 ntTSL 2 BASIC16.47■□□□□ 0.23
AP3S2P59780 SHISA3-201ENST00000319234 1971 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
AP3S2P59780 MCOLN2-201ENST00000284027 1729 ntAPPRIS P1 TSL 5 BASIC16.47■□□□□ 0.23
AP3S2P59780 VWA8-AS1-201ENST00000611103 2079 ntTSL 2 BASIC16.47■□□□□ 0.23
AP3S2P59780 CHAC1-205ENST00000617961 1498 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
AP3S2P59780 FDXR-202ENST00000413947 1809 ntTSL 2 BASIC16.47■□□□□ 0.23
AP3S2P59780 SLC39A7-201ENST00000374675 2153 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
AP3S2P59780 PHKA1-205ENST00000541944 5944 ntAPPRIS ALT1 TSL 1 (best) BASIC16.47■□□□□ 0.23
AP3S2P59780 PLA2G2F-201ENST00000375102 2723 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
AP3S2P59780 CD55-203ENST00000367063 1691 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
AP3S2P59780 AC138028.1-201ENST00000333666 2137 ntTSL 2 BASIC16.46■□□□□ 0.23
AP3S2P59780 SSUH2-202ENST00000341795 1799 ntAPPRIS P3 TSL 1 (best) BASIC16.46■□□□□ 0.23
AP3S2P59780 CAPS-201ENST00000452990 1789 ntTSL 5 BASIC16.46■□□□□ 0.23
AP3S2P59780 GNE-201ENST00000377902 2565 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
AP3S2P59780 FLYWCH1-203ENST00000416288 4963 ntAPPRIS P3 TSL 1 (best) BASIC16.46■□□□□ 0.23
AP3S2P59780 CAMK2D-201ENST00000296402 5820 ntAPPRIS P3 TSL 5 BASIC16.46■□□□□ 0.23
AP3S2P59780 CTNNBL1-204ENST00000405275 2076 ntTSL 5 BASIC16.46■□□□□ 0.23
AP3S2P59780 SLC38A11-203ENST00000409149 1621 ntAPPRIS P2 TSL 2 BASIC16.46■□□□□ 0.23
AP3S2P59780 SYNDIG1L-201ENST00000331628 2607 ntAPPRIS P1 TSL 5 BASIC16.46■□□□□ 0.23
AP3S2P59780 ANKRD18DP-201ENST00000335478 2171 ntTSL 2 BASIC16.46■□□□□ 0.23
AP3S2P59780 AC135782.1-201ENST00000537498 2154 ntTSL 2 BASIC16.46■□□□□ 0.23
AP3S2P59780 PRDM8-203ENST00000504452 3706 ntAPPRIS P1 TSL 5 BASIC16.46■□□□□ 0.23
AP3S2P59780 ATPIF1-203ENST00000468425 539 ntTSL 2 BASIC16.46■□□□□ 0.23
AP3S2P59780 AC022509.3-202ENST00000545819 566 ntTSL 3 BASIC16.46■□□□□ 0.23
AP3S2P59780 AC024257.2-201ENST00000549699 147 ntBASIC16.46■□□□□ 0.23
AP3S2P59780 PRKAR2A-206ENST00000454963 1849 ntAPPRIS P1 TSL 2 BASIC16.46■□□□□ 0.23
AP3S2P59780 WHAMMP3-203ENST00000621139 4494 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
AP3S2P59780 MSANTD1-201ENST00000438480 2922 ntAPPRIS P3 TSL 5 BASIC16.46■□□□□ 0.23
AP3S2P59780 KAT2A-201ENST00000225916 3109 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
AP3S2P59780 CARNS1-202ENST00000445895 3971 ntAPPRIS P1 TSL 5 BASIC16.46■□□□□ 0.23
AP3S2P59780 VAV1-204ENST00000596764 2775 ntTSL 2 BASIC16.46■□□□□ 0.23
AP3S2P59780 RBFOX1-204ENST00000422070 1684 ntTSL 2 BASIC16.46■□□□□ 0.23
AP3S2P59780 NAPRT-202ENST00000426292 1654 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
AP3S2P59780 TBC1D20-201ENST00000354200 4466 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
AP3S2P59780 CROCCP3-201ENST00000263511 5368 ntTSL 1 (best) BASIC16.46■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 32.2 ms