Protein–RNA interactions for Protein: P56749

CLDN12, Claudin-12, humanhuman

Predictions only

Length 244 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN12P56749 CYR61-201ENST00000451137 2290 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
CLDN12P56749 SEMA3D-202ENST00000444867 1605 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
CLDN12P56749 SEPT2-245ENST00000616972 3446 ntTSL 2 BASIC16.69■□□□□ 0.26
CLDN12P56749 CFAP100-203ENST00000505024 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
CLDN12P56749 LINC01505-207ENST00000637185 1540 ntTSL 5 BASIC16.69■□□□□ 0.26
CLDN12P56749 SDHAP1-207ENST00000440850 2000 ntBASIC16.69■□□□□ 0.26
CLDN12P56749 AFG3L1P-203ENST00000418696 2965 ntTSL 2 BASIC16.68■□□□□ 0.26
CLDN12P56749 TSGA10IP-203ENST00000532620 1925 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
CLDN12P56749 ZYG11A-203ENST00000612017 3682 ntTSL 5 BASIC16.68■□□□□ 0.26
CLDN12P56749 CRHR2-207ENST00000471646 2530 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
CLDN12P56749 HYOU1-212ENST00000532519 2162 ntTSL 5 BASIC16.68■□□□□ 0.26
CLDN12P56749 GHDC-212ENST00000593209 1827 ntTSL 5 BASIC16.68■□□□□ 0.26
CLDN12P56749 NAPA-210ENST00000595227 1460 ntTSL 3 BASIC16.68■□□□□ 0.26
CLDN12P56749 VIPR1-201ENST00000325123 2773 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
CLDN12P56749 EIF2B5-201ENST00000273783 2655 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
CLDN12P56749 HOXD10-201ENST00000249501 1989 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
CLDN12P56749 PAK4-201ENST00000321944 2555 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
CLDN12P56749 ARPC4-201ENST00000397261 2582 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
CLDN12P56749 APP-203ENST00000354192 3167 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
CLDN12P56749 ECE1-203ENST00000374893 2484 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
CLDN12P56749 ALDH1A3-201ENST00000329841 3924 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
CLDN12P56749 AL354751.1-201ENST00000412768 1863 ntBASIC16.68■□□□□ 0.26
CLDN12P56749 MRPL23-AS1-201ENST00000419080 1876 ntTSL 3 BASIC16.68■□□□□ 0.26
CLDN12P56749 CCDC91-220ENST00000545336 2738 ntAPPRIS P1 TSL 5 BASIC16.68■□□□□ 0.26
CLDN12P56749 HACD1-201ENST00000326961 773 ntTSL 2 BASIC16.68■□□□□ 0.26
CLDN12P56749 CFD-201ENST00000327726 1201 ntAPPRIS P3 TSL 1 (best) BASIC16.68■□□□□ 0.26
CLDN12P56749 ASIP-201ENST00000374954 586 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
CLDN12P56749 MPRIP-203ENST00000395806 527 ntTSL 3 BASIC16.68■□□□□ 0.26
CLDN12P56749 IDH2-203ENST00000559482 1278 ntTSL 5 BASIC16.68■□□□□ 0.26
CLDN12P56749 COX4I1-216ENST00000568794 794 ntTSL 5 BASIC16.68■□□□□ 0.26
CLDN12P56749 TMEM230-210ENST00000612323 1231 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
CLDN12P56749 GGTLC3-201ENST00000619998 968 ntAPPRIS P1 TSL 5 BASIC16.68■□□□□ 0.26
CLDN12P56749 SHKBP1-201ENST00000291842 2363 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
CLDN12P56749 NR4A1-203ENST00000394824 2639 ntAPPRIS P1 TSL 5 BASIC16.68■□□□□ 0.26
CLDN12P56749 TBX6-201ENST00000279386 1796 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
CLDN12P56749 SIGLEC10-204ENST00000436984 1776 ntTSL 2 BASIC16.68■□□□□ 0.26
CLDN12P56749 TBX6-205ENST00000627355 1796 ntTSL 5 BASIC16.68■□□□□ 0.26
CLDN12P56749 ENTPD5-206ENST00000556242 1437 ntTSL 5 BASIC16.68■□□□□ 0.26
CLDN12P56749 DHRS12-201ENST00000218981 1970 ntTSL 2 BASIC16.68■□□□□ 0.26
CLDN12P56749 COL18A1-202ENST00000355480 5924 ntAPPRIS P3 TSL 1 (best) BASIC16.68■□□□□ 0.26
CLDN12P56749 SYNM-202ENST00000336292 7394 ntAPPRIS P4 TSL 1 (best) BASIC16.67■□□□□ 0.26
CLDN12P56749 EPN2-212ENST00000575595 1491 ntTSL 2 BASIC16.67■□□□□ 0.26
CLDN12P56749 ANKS3-230ENST00000614075 2387 ntAPPRIS P1 TSL 5 BASIC16.67■□□□□ 0.26
CLDN12P56749 SIRT1-201ENST00000212015 4094 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
CLDN12P56749 SLC39A1-209ENST00000537590 2022 ntTSL 2 BASIC16.67■□□□□ 0.26
CLDN12P56749 WAC-202ENST00000347934 2839 ntTSL 5 BASIC16.67■□□□□ 0.26
CLDN12P56749 ATP2A3-201ENST00000309890 4826 ntTSL 5 BASIC16.67■□□□□ 0.26
CLDN12P56749 OSR2-210ENST00000523368 1519 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
CLDN12P56749 ARHGAP26-201ENST00000274498 6862 ntAPPRIS P3 TSL 1 (best) BASIC16.67■□□□□ 0.26
CLDN12P56749 N4BP3-201ENST00000274605 6080 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
CLDN12P56749 VBP1-201ENST00000286428 1686 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
CLDN12P56749 MRPL39-201ENST00000307301 1199 ntAPPRIS ALT2 TSL 5 BASIC16.67■□□□□ 0.26
CLDN12P56749 MRPL39-202ENST00000352957 1110 ntAPPRIS P3 TSL 1 (best) BASIC16.67■□□□□ 0.26
CLDN12P56749 HTT-AS-201ENST00000503893 515 ntTSL 4 BASIC16.67■□□□□ 0.26
CLDN12P56749 AC025754.1-201ENST00000507566 407 ntTSL 3 BASIC16.67■□□□□ 0.26
CLDN12P56749 AC022509.3-202ENST00000545819 566 ntTSL 3 BASIC16.67■□□□□ 0.26
CLDN12P56749 AL845552.2-201ENST00000553301 553 ntTSL 4 BASIC16.67■□□□□ 0.26
CLDN12P56749 AL589743.5-201ENST00000616611 1050 ntBASIC16.67■□□□□ 0.26
CLDN12P56749 MRC2-201ENST00000303375 5988 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
CLDN12P56749 LINC01586-201ENST00000506090 1840 ntTSL 2 BASIC16.67■□□□□ 0.26
CLDN12P56749 SPESP1-201ENST00000310673 1431 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
CLDN12P56749 SMUG1-202ENST00000337581 1571 ntAPPRIS P1 TSL 2 BASIC16.67■□□□□ 0.26
CLDN12P56749 ANKRD13B-209ENST00000614878 2670 ntAPPRIS P1 TSL 5 BASIC16.67■□□□□ 0.26
CLDN12P56749 ARHGEF28-203ENST00000426542 6118 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
CLDN12P56749 KAZN-203ENST00000376030 6030 ntAPPRIS P1 TSL 5 BASIC16.67■□□□□ 0.26
CLDN12P56749 RNH1-201ENST00000354420 1894 ntAPPRIS P1 TSL 5 BASIC16.67■□□□□ 0.26
CLDN12P56749 CENPH-206ENST00000515001 1305 ntTSL 2 BASIC16.67■□□□□ 0.26
CLDN12P56749 CACNA1A-227ENST00000636549 6792 ntAPPRIS ALT2 TSL 5 BASIC16.66■□□□□ 0.26
CLDN12P56749 TOR2A-203ENST00000373284 1523 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
CLDN12P56749 IRX1P1-201ENST00000438849 1838 ntBASIC16.66■□□□□ 0.26
CLDN12P56749 PTGIR-201ENST00000291294 2107 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
CLDN12P56749 IGFALS-202ENST00000415638 2136 ntTSL 2 BASIC16.66■□□□□ 0.26
CLDN12P56749 OPA3-202ENST00000323060 2250 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
CLDN12P56749 TMPRSS9-205ENST00000613480 2568 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
CLDN12P56749 EIF5-201ENST00000216554 5945 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
CLDN12P56749 MZB1-201ENST00000302125 825 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
CLDN12P56749 FAM160B1-201ENST00000369246 666 ntTSL 2 BASIC16.66■□□□□ 0.26
CLDN12P56749 CHRFAM7A-202ENST00000397827 2794 ntTSL 5 BASIC16.66■□□□□ 0.26
CLDN12P56749 CENPVL3-201ENST00000417339 864 ntAPPRIS P1 BASIC16.66■□□□□ 0.26
CLDN12P56749 ZNRF2P3-201ENST00000424200 374 ntBASIC16.66■□□□□ 0.26
CLDN12P56749 CYP2T1P-201ENST00000432607 1285 ntBASIC16.66■□□□□ 0.26
CLDN12P56749 KRT18P11-201ENST00000435214 1283 ntBASIC16.66■□□□□ 0.26
CLDN12P56749 AC007161.3-201ENST00000469183 637 ntTSL 5 BASIC16.66■□□□□ 0.26
CLDN12P56749 PPP1R14A-205ENST00000591585 949 ntTSL 2 BASIC16.66■□□□□ 0.26
CLDN12P56749 PCOLCE-AS1-201ENST00000442166 2537 ntTSL 2 BASIC16.66■□□□□ 0.26
CLDN12P56749 EFTUD1P1-204ENST00000560401 1798 ntBASIC16.66■□□□□ 0.26
CLDN12P56749 EEF1D-225ENST00000529272 1311 ntAPPRIS ALT2 TSL 2 BASIC16.66■□□□□ 0.26
CLDN12P56749 CHST11-201ENST00000303694 5709 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
CLDN12P56749 AIPL1-209ENST00000575265 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
CLDN12P56749 CHRAC1-201ENST00000220913 2488 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CLDN12P56749 SERPINE2-201ENST00000258405 2195 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
CLDN12P56749 ADCY3-201ENST00000260600 5050 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
CLDN12P56749 CENPN-201ENST00000299572 1398 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
CLDN12P56749 IGSF9-206ENST00000611023 2663 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
CLDN12P56749 ATRIP-202ENST00000346691 2509 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
CLDN12P56749 POFUT2-201ENST00000331343 4825 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
CLDN12P56749 ABHD14A-ACY1-202ENST00000463937 1705 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
CLDN12P56749 NOC2LP1-202ENST00000452600 2235 ntBASIC16.65■□□□□ 0.26
CLDN12P56749 TFP1-202ENST00000475455 1573 ntBASIC16.65■□□□□ 0.26
CLDN12P56749 RBM7-201ENST00000375490 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 74 ms