Protein–RNA interactions for Protein: P55285

CDH6, Cadherin-6, humanhuman

Predictions only

Length 790 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH6P55285 CACNA1A-246ENST00000637736 8340 ntAPPRIS ALT2 TSL 5 BASIC19.96■□□□□ 0.79
CDH6P55285 SLC39A4-201ENST00000276833 2297 ntTSL 2 BASIC19.96■□□□□ 0.79
CDH6P55285 ASGR1-208ENST00000574388 1552 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
CDH6P55285 CWH43-201ENST00000226432 2472 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
CDH6P55285 MEF2B-204ENST00000424583 1405 ntAPPRIS P1 TSL 5 BASIC19.96■□□□□ 0.79
CDH6P55285 TUBA3FP-202ENST00000422086 1974 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
CDH6P55285 DCBLD2-201ENST00000326840 6122 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
CDH6P55285 CMTM7-202ENST00000349718 1214 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
CDH6P55285 KRT18P29-201ENST00000397031 1267 ntBASIC19.96■□□□□ 0.79
CDH6P55285 UBE2F-203ENST00000409633 837 ntTSL 3 BASIC19.96■□□□□ 0.79
CDH6P55285 AC091564.2-201ENST00000527191 399 ntTSL 3 BASIC19.96■□□□□ 0.79
CDH6P55285 CLN6-206ENST00000565471 1075 ntTSL 2 BASIC19.96■□□□□ 0.79
CDH6P55285 AL160286.2-201ENST00000567150 934 ntBASIC19.96■□□□□ 0.79
CDH6P55285 ICAM2-207ENST00000579687 1154 ntAPPRIS P1 TSL 3 BASIC19.96■□□□□ 0.79
CDH6P55285 MTFP1-206ENST00000629597 482 ntTSL 5 BASIC19.96■□□□□ 0.79
CDH6P55285 PPP1R12C-202ENST00000435544 2363 ntTSL 2 BASIC19.96■□□□□ 0.79
CDH6P55285 EPB41L4B-201ENST00000374557 4006 ntAPPRIS ALT2 TSL 1 (best) BASIC19.96■□□□□ 0.79
CDH6P55285 FAM198A-202ENST00000430121 3121 ntAPPRIS P2 TSL 5 BASIC19.96■□□□□ 0.79
CDH6P55285 C19orf66-209ENST00000591813 1481 ntAPPRIS ALT2 TSL 1 (best) BASIC19.96■□□□□ 0.79
CDH6P55285 PAX1-205ENST00000613128 5352 ntAPPRIS ALT2 TSL 1 (best) BASIC19.96■□□□□ 0.79
CDH6P55285 GOSR2-210ENST00000576910 1891 ntAPPRIS ALT1 TSL 5 BASIC19.96■□□□□ 0.79
CDH6P55285 ABCC6-209ENST00000640696 1893 ntTSL 5 BASIC19.96■□□□□ 0.79
CDH6P55285 IKBKG-214ENST00000618670 2069 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
CDH6P55285 DDAH2-211ENST00000375787 1330 ntAPPRIS P1 TSL 5 BASIC19.96■□□□□ 0.79
CDH6P55285 MRPS2-201ENST00000241600 1510 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
CDH6P55285 GDF5OS-201ENST00000374375 1734 ntAPPRIS P1 TSL 2 BASIC19.96■□□□□ 0.79
CDH6P55285 GABRD-205ENST00000638771 1707 ntAPPRIS ALT2 TSL 3 BASIC19.96■□□□□ 0.79
CDH6P55285 CDHR5-201ENST00000349570 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC19.96■□□□□ 0.79
CDH6P55285 PTPA-204ENST00000355007 2515 ntTSL 5 BASIC19.96■□□□□ 0.79
CDH6P55285 SIX5-203ENST00000560168 1975 ntTSL 4 BASIC19.95■□□□□ 0.78
CDH6P55285 NFATC2IP-201ENST00000320805 4569 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
CDH6P55285 CD55-201ENST00000314754 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC19.95■□□□□ 0.78
CDH6P55285 ARHGEF18-202ENST00000359920 5733 ntAPPRIS ALT2 TSL 2 BASIC19.95■□□□□ 0.78
CDH6P55285 LYNX1-204ENST00000614491 4708 ntAPPRIS P1 TSL 2 BASIC19.95■□□□□ 0.78
CDH6P55285 TFDP2-202ENST00000467072 1853 ntAPPRIS P3 TSL 1 (best) BASIC19.95■□□□□ 0.78
CDH6P55285 RPP25L-201ENST00000297613 1092 ntAPPRIS P1 TSL 2 BASIC19.95■□□□□ 0.78
CDH6P55285 PMF1-BGLAP-202ENST00000368276 852 ntTSL 3 BASIC19.95■□□□□ 0.78
CDH6P55285 PSEN1-203ENST00000394157 1249 ntTSL 2 BASIC19.95■□□□□ 0.78
CDH6P55285 MFSD4A-206ENST00000489709 1136 ntTSL 5 BASIC19.95■□□□□ 0.78
CDH6P55285 SPINK2-202ENST00000504762 659 ntAPPRIS ALT2 TSL 2 BASIC19.95■□□□□ 0.78
CDH6P55285 AL691442.1-201ENST00000505139 1042 ntAPPRIS P1 TSL 2 BASIC19.95■□□□□ 0.78
CDH6P55285 C1QBPP2-201ENST00000528754 825 ntBASIC19.95■□□□□ 0.78
CDH6P55285 AC140479.4-201ENST00000561715 463 ntTSL 4 BASIC19.95■□□□□ 0.78
CDH6P55285 MBD3-207ENST00000590550 2782 ntTSL 2 BASIC19.95■□□□□ 0.78
CDH6P55285 AC004408.2-201ENST00000623613 2777 ntBASIC19.95■□□□□ 0.78
CDH6P55285 MB21D1-202ENST00000370318 1917 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
CDH6P55285 CDH22-201ENST00000372262 3661 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
CDH6P55285 MAPK9-201ENST00000343111 4369 ntTSL 5 BASIC19.95■□□□□ 0.78
CDH6P55285 TMEM191A-208ENST00000450925 1961 ntTSL 2 BASIC19.95■□□□□ 0.78
CDH6P55285 DGKI-202ENST00000424189 4163 ntAPPRIS ALT2 TSL 5 BASIC19.95■□□□□ 0.78
CDH6P55285 DHRS4-204ENST00000543741 1340 ntTSL 2 BASIC19.95■□□□□ 0.78
CDH6P55285 WIPF1-202ENST00000359761 2003 ntAPPRIS P2 TSL 1 (best) BASIC19.95■□□□□ 0.78
CDH6P55285 MLST8-232ENST00000569417 1870 ntAPPRIS P3 TSL 1 (best) BASIC19.94■□□□□ 0.78
CDH6P55285 KCNQ2-201ENST00000344425 1426 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
CDH6P55285 TMEM230-206ENST00000379283 1660 ntAPPRIS P1 TSL 3 BASIC19.94■□□□□ 0.78
CDH6P55285 CADPS2-208ENST00000615869 6066 ntAPPRIS ALT1 TSL 5 BASIC19.94■□□□□ 0.78
CDH6P55285 MORC4-201ENST00000255495 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
CDH6P55285 NAT16-201ENST00000300303 2935 ntAPPRIS P2 TSL 2 BASIC19.94■□□□□ 0.78
CDH6P55285 ADAP2-201ENST00000330889 2934 ntAPPRIS P2 TSL 1 (best) BASIC19.94■□□□□ 0.78
CDH6P55285 RPS6KB2-201ENST00000312629 1733 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
CDH6P55285 HEXDC-201ENST00000327949 1733 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
CDH6P55285 KREMEN2-206ENST00000575885 1798 ntTSL 2 BASIC19.94■□□□□ 0.78
CDH6P55285 Z98884.1-201ENST00000451646 830 ntTSL 3 BASIC19.94■□□□□ 0.78
CDH6P55285 AC108693.2-201ENST00000492981 303 ntTSL 3 BASIC19.94■□□□□ 0.78
CDH6P55285 C14orf144-202ENST00000555282 854 ntTSL 3 BASIC19.94■□□□□ 0.78
CDH6P55285 AC009090.2-201ENST00000565829 472 ntTSL 3 BASIC19.94■□□□□ 0.78
CDH6P55285 C19orf25-213ENST00000592872 1287 ntAPPRIS P1 TSL 2 BASIC19.94■□□□□ 0.78
CDH6P55285 LINC01586-201ENST00000506090 1840 ntTSL 2 BASIC19.94■□□□□ 0.78
CDH6P55285 MIB2-203ENST00000378712 2890 ntTSL 2 BASIC19.94■□□□□ 0.78
CDH6P55285 HCN2-201ENST00000251287 3408 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
CDH6P55285 RHOT1-202ENST00000354266 2919 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
CDH6P55285 PKD2-201ENST00000237596 5056 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
CDH6P55285 SYT7-209ENST00000542836 1362 ntTSL 5 BASIC19.94■□□□□ 0.78
CDH6P55285 HNRNPLL-206ENST00000410076 1687 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
CDH6P55285 SLC47A1-202ENST00000395585 1998 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
CDH6P55285 CD82-201ENST00000227155 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
CDH6P55285 ANKDD1B-204ENST00000601380 2569 ntAPPRIS P1 TSL 5 BASIC19.93■□□□□ 0.78
CDH6P55285 C1orf210-202ENST00000523677 1478 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
CDH6P55285 DENND1A-203ENST00000373624 5010 ntAPPRIS P4 TSL 5 BASIC19.93■□□□□ 0.78
CDH6P55285 TBL1Y-203ENST00000383032 2407 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
CDH6P55285 FER1L4-211ENST00000616283 1818 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
CDH6P55285 HOTAIRM1-203ENST00000429611 722 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
CDH6P55285 AC073111.3-201ENST00000478789 635 ntAPPRIS P1 TSL 3 BASIC19.93■□□□□ 0.78
CDH6P55285 LINC00636-201ENST00000494231 1264 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
CDH6P55285 AL359399.1-201ENST00000557610 462 ntTSL 3 BASIC19.93■□□□□ 0.78
CDH6P55285 SUMO2-203ENST00000578238 490 ntTSL 2 BASIC19.93■□□□□ 0.78
CDH6P55285 AL158152.2-201ENST00000602703 235 ntTSL 3 BASIC19.93■□□□□ 0.78
CDH6P55285 REST-211ENST00000640168 1268 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
CDH6P55285 ECEL1-201ENST00000304546 2865 ntAPPRIS P3 TSL 1 (best) BASIC19.93■□□□□ 0.78
CDH6P55285 SBDS-201ENST00000246868 1631 ntAPPRIS P2 TSL 1 (best) BASIC19.93■□□□□ 0.78
CDH6P55285 CCT5-214ENST00000515676 1997 ntTSL 2 BASIC19.93■□□□□ 0.78
CDH6P55285 LIPG-203ENST00000577628 2323 ntTSL 2 BASIC19.93■□□□□ 0.78
CDH6P55285 P2RY2-201ENST00000311131 2660 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
CDH6P55285 TMSB15B-201ENST00000419165 1666 ntAPPRIS P1 TSL 2 BASIC19.93■□□□□ 0.78
CDH6P55285 NOM1-201ENST00000275820 6077 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
CDH6P55285 PSPC1-206ENST00000619300 2013 ntAPPRIS P1 TSL 5 BASIC19.93■□□□□ 0.78
CDH6P55285 P2RY6-212ENST00000618468 2431 ntAPPRIS P1 TSL 3 BASIC19.93■□□□□ 0.78
CDH6P55285 TCIRG1-213ENST00000532635 2457 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
CDH6P55285 CLDND1-203ENST00000394181 2170 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
CDH6P55285 GMPPA-203ENST00000358215 1823 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Retrieved 100 of 98,524 protein–RNA pairs in 25.6 ms