Protein–RNA interactions for Protein: P55273

CDKN2D, Cyclin-dependent kinase 4 inhibitor D, humanhuman

Predictions only

Length 166 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN2DP55273 SBDS-201ENST00000246868 1631 ntAPPRIS P2 TSL 1 (best) BASIC18.96■□□□□ 0.63
CDKN2DP55273 TULP1-201ENST00000229771 2162 ntAPPRIS P2 TSL 1 (best) BASIC18.96■□□□□ 0.63
CDKN2DP55273 GPS2-201ENST00000380728 1379 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
CDKN2DP55273 RNASET2-214ENST00000620173 1391 ntTSL 5 BASIC18.96■□□□□ 0.63
CDKN2DP55273 MVB12A-201ENST00000317040 2223 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
CDKN2DP55273 TMEM230-206ENST00000379283 1660 ntAPPRIS P1 TSL 3 BASIC18.96■□□□□ 0.63
CDKN2DP55273 IZUMO2-201ENST00000293405 728 ntAPPRIS P2 TSL 1 (best) BASIC18.96■□□□□ 0.63
CDKN2DP55273 PDZRN3-202ENST00000308537 1136 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
CDKN2DP55273 GUK1-201ENST00000312726 1084 ntAPPRIS P3 TSL 1 (best) BASIC18.96■□□□□ 0.63
CDKN2DP55273 NMRK1-201ENST00000361092 1185 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
CDKN2DP55273 TRA2B-203ENST00000382191 976 ntTSL 2 BASIC18.96■□□□□ 0.63
CDKN2DP55273 PSEN1-203ENST00000394157 1249 ntTSL 2 BASIC18.96■□□□□ 0.63
CDKN2DP55273 AC027451.1-201ENST00000530667 553 ntTSL 4 BASIC18.96■□□□□ 0.63
CDKN2DP55273 RN7SL471P-201ENST00000580476 299 ntBASIC18.96■□□□□ 0.63
CDKN2DP55273 ASPSCR1-211ENST00000581647 720 ntTSL 2 BASIC18.96■□□□□ 0.63
CDKN2DP55273 MTFP1-206ENST00000629597 482 ntTSL 5 BASIC18.96■□□□□ 0.63
CDKN2DP55273 KRT6C-201ENST00000252250 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
CDKN2DP55273 KRT6B-201ENST00000252252 2282 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
CDKN2DP55273 FOLH1-203ENST00000343844 2258 ntTSL 2 BASIC18.96■□□□□ 0.63
CDKN2DP55273 LAMC3-202ENST00000361069 6133 ntAPPRIS P1 TSL 2 BASIC18.96■□□□□ 0.63
CDKN2DP55273 AC005906.2-207ENST00000639005 1580 ntTSL 5 BASIC18.96■□□□□ 0.63
CDKN2DP55273 PRELID3A-201ENST00000336990 1715 ntAPPRIS P1 TSL 2 BASIC18.96■□□□□ 0.63
CDKN2DP55273 FEM1AP3-201ENST00000403722 1741 ntBASIC18.96■□□□□ 0.63
CDKN2DP55273 PRELID3A-202ENST00000440960 1716 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
CDKN2DP55273 SLC31A2-201ENST00000259392 1785 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
CDKN2DP55273 FKRP-202ENST00000391909 2801 ntAPPRIS P1 TSL 2 BASIC18.96■□□□□ 0.63
CDKN2DP55273 DYRK2-202ENST00000344096 8912 ntAPPRIS P4 TSL 1 (best) BASIC18.95■□□□□ 0.62
CDKN2DP55273 HOXC13-201ENST00000243056 2423 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
CDKN2DP55273 STMN4-202ENST00000350889 2288 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
CDKN2DP55273 CEMP1-202ENST00000567119 1374 ntAPPRIS P2 BASIC18.95■□□□□ 0.62
CDKN2DP55273 NUTM2D-201ENST00000381697 3290 ntAPPRIS P5 TSL 1 (best) BASIC18.95■□□□□ 0.62
CDKN2DP55273 OLFM1-202ENST00000277415 1014 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
CDKN2DP55273 RTL8A-201ENST00000370775 1244 ntAPPRIS P1 BASIC18.95■□□□□ 0.62
CDKN2DP55273 NUDT8-202ENST00000376693 728 ntAPPRIS ALT2 TSL 2 BASIC18.95■□□□□ 0.62
CDKN2DP55273 UHRF2-202ENST00000381373 802 ntTSL 3 BASIC18.95■□□□□ 0.62
CDKN2DP55273 UBE2F-203ENST00000409633 837 ntTSL 3 BASIC18.95■□□□□ 0.62
CDKN2DP55273 KRT16P5-201ENST00000455284 522 ntBASIC18.95■□□□□ 0.62
CDKN2DP55273 CD99P1-205ENST00000527459 561 ntBASIC18.95■□□□□ 0.62
CDKN2DP55273 OPA3-203ENST00000544371 1146 ntTSL 2 BASIC18.95■□□□□ 0.62
CDKN2DP55273 KANSL1-AS1-203ENST00000572973 424 ntTSL 3 BASIC18.95■□□□□ 0.62
CDKN2DP55273 FBXO17-202ENST00000595329 1299 ntAPPRIS P1 TSL 2 BASIC18.95■□□□□ 0.62
CDKN2DP55273 KCNA3-201ENST00000369769 2569 ntAPPRIS P1 BASIC18.95■□□□□ 0.62
CDKN2DP55273 MEPCE-202ENST00000414441 2261 ntTSL 2 BASIC18.95■□□□□ 0.62
CDKN2DP55273 RBPMS-210ENST00000520191 1613 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
CDKN2DP55273 C19orf66-209ENST00000591813 1481 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
CDKN2DP55273 IL6R-208ENST00000622330 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
CDKN2DP55273 BACE1-203ENST00000428381 1333 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
CDKN2DP55273 AK4-208ENST00000546702 1335 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
CDKN2DP55273 HNRNPLL-206ENST00000410076 1687 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
CDKN2DP55273 AGAP4-201ENST00000311652 2715 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
CDKN2DP55273 KLHL14-201ENST00000358095 1884 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
CDKN2DP55273 ENOPH1-203ENST00000509635 1874 ntTSL 3 BASIC18.94■□□□□ 0.62
CDKN2DP55273 SNAI3-201ENST00000332281 1732 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
CDKN2DP55273 TM9SF1-206ENST00000528669 2425 ntTSL 5 BASIC18.94■□□□□ 0.62
CDKN2DP55273 TPD52-211ENST00000519303 1594 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
CDKN2DP55273 TMEM250-201ENST00000418388 2823 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
CDKN2DP55273 NCK2-205ENST00000451463 1795 ntTSL 2 BASIC18.94■□□□□ 0.62
CDKN2DP55273 GLS-201ENST00000320717 4834 ntAPPRIS P3 TSL 1 (best) BASIC18.94■□□□□ 0.62
CDKN2DP55273 LDHD-202ENST00000450168 1966 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
CDKN2DP55273 TMEM8B-204ENST00000439587 2150 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
CDKN2DP55273 MYC-205ENST00000524013 2150 ntAPPRIS ALT1 TSL 1 (best) BASIC18.94■□□□□ 0.62
CDKN2DP55273 KCNMA1-220ENST00000481070 896 ntTSL 2 BASIC18.94■□□□□ 0.62
CDKN2DP55273 LINC00636-201ENST00000494231 1264 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
CDKN2DP55273 DENND3-207ENST00000518347 850 ntTSL 2 BASIC18.94■□□□□ 0.62
CDKN2DP55273 AC140479.4-201ENST00000561715 463 ntTSL 4 BASIC18.94■□□□□ 0.62
CDKN2DP55273 AL158152.2-201ENST00000602703 235 ntTSL 3 BASIC18.94■□□□□ 0.62
CDKN2DP55273 REST-211ENST00000640168 1268 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
CDKN2DP55273 SBNO2-201ENST00000361757 4923 ntAPPRIS P4 TSL 1 (best) BASIC18.94■□□□□ 0.62
CDKN2DP55273 GDPD1-201ENST00000284116 1821 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
CDKN2DP55273 EDN3-204ENST00000371028 2397 ntAPPRIS P4 TSL 5 BASIC18.94■□□□□ 0.62
CDKN2DP55273 PCDHB14-202ENST00000624896 2367 ntTSL 2 BASIC18.94■□□□□ 0.62
CDKN2DP55273 GATM-201ENST00000396659 2597 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
CDKN2DP55273 TMEM198-202ENST00000373883 2218 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
CDKN2DP55273 ARHGAP11A-208ENST00000567348 2422 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
CDKN2DP55273 SLC35A3-205ENST00000465289 5696 ntAPPRIS P1 TSL 5 BASIC18.94■□□□□ 0.62
CDKN2DP55273 TRIM73-202ENST00000430211 1321 ntAPPRIS ALT2 TSL 2 BASIC18.94■□□□□ 0.62
CDKN2DP55273 TEPSIN-201ENST00000300714 2287 ntAPPRIS P2 TSL 1 (best) BASIC18.94■□□□□ 0.62
CDKN2DP55273 SLC25A47-201ENST00000361529 1738 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
CDKN2DP55273 PPP2R5A-201ENST00000261461 3128 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
CDKN2DP55273 SLC3A2-202ENST00000377889 1993 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
CDKN2DP55273 LINC01819-201ENST00000422351 2156 ntTSL 5 BASIC18.93■□□□□ 0.62
CDKN2DP55273 NTRK1-206ENST00000524377 2432 ntAPPRIS P3 TSL 1 (best) BASIC18.93■□□□□ 0.62
CDKN2DP55273 ANKMY1-209ENST00000405523 1827 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
CDKN2DP55273 UMOD-201ENST00000302509 2477 ntAPPRIS P3 TSL 5 BASIC18.93■□□□□ 0.62
CDKN2DP55273 ACY1-201ENST00000404366 1473 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
CDKN2DP55273 ISG20-202ENST00000379224 540 ntTSL 3 BASIC18.93■□□□□ 0.62
CDKN2DP55273 LINC02531-201ENST00000404689 593 ntTSL 5 BASIC18.93■□□□□ 0.62
CDKN2DP55273 AC096537.1-201ENST00000437416 684 ntTSL 5 BASIC18.93■□□□□ 0.62
CDKN2DP55273 AC128676.1-201ENST00000454392 318 ntBASIC18.93■□□□□ 0.62
CDKN2DP55273 RTBDN-203ENST00000458671 1066 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
CDKN2DP55273 AC133681.1-201ENST00000465482 601 ntBASIC18.93■□□□□ 0.62
CDKN2DP55273 NDUFS6-202ENST00000469176 550 ntTSL 2 BASIC18.93■□□□□ 0.62
CDKN2DP55273 MFSD4A-206ENST00000489709 1136 ntTSL 5 BASIC18.93■□□□□ 0.62
CDKN2DP55273 RNF167-205ENST00000571816 1728 ntAPPRIS P3 TSL 5 BASIC18.93■□□□□ 0.62
CDKN2DP55273 MRPS2-201ENST00000241600 1510 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
CDKN2DP55273 TMEM106C-202ENST00000429772 1515 ntAPPRIS P1 TSL 2 BASIC18.93■□□□□ 0.62
CDKN2DP55273 ADAMTS19-205ENST00000638972 5089 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
CDKN2DP55273 PRR5-ARHGAP8-201ENST00000352766 2043 ntAPPRIS P1 TSL 2 BASIC18.93■□□□□ 0.62
CDKN2DP55273 UVSSA-207ENST00000511216 2927 ntAPPRIS P2 TSL 1 (best) BASIC18.93■□□□□ 0.62
CDKN2DP55273 ZBTB48-202ENST00000377674 2293 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 23.3 ms