Protein–RNA interactions for Protein: P46094

XCR1, Chemokine XC receptor 1, humanhuman

Predictions only

Length 333 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
XCR1P46094 DMWD-201ENST00000270223 3305 ntAPPRIS P2 TSL 1 (best) BASIC18.31■□□□□ 0.52
XCR1P46094 RRAS-201ENST00000246792 1044 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
XCR1P46094 C7orf50-201ENST00000357429 1294 ntAPPRIS P2 TSL 1 (best) BASIC18.31■□□□□ 0.52
XCR1P46094 TSTD1-202ENST00000368023 574 ntAPPRIS ALT2 TSL 2 BASIC18.31■□□□□ 0.52
XCR1P46094 HDAC11-205ENST00000404548 577 ntTSL 4 BASIC18.31■□□□□ 0.52
XCR1P46094 LMCD1-AS1-204ENST00000446281 932 ntTSL 5 BASIC18.31■□□□□ 0.52
XCR1P46094 MRPL36-202ENST00000505059 610 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
XCR1P46094 NUDT16P1-203ENST00000513809 620 ntBASIC18.31■□□□□ 0.52
XCR1P46094 C12orf76-208ENST00000551185 496 ntTSL 2 BASIC18.31■□□□□ 0.52
XCR1P46094 AP003071.4-201ENST00000562276 1284 ntBASIC18.31■□□□□ 0.52
XCR1P46094 TNFRSF12A-206ENST00000575124 1133 ntTSL 2 BASIC18.31■□□□□ 0.52
XCR1P46094 AL031985.4-201ENST00000642138 673 ntBASIC18.31■□□□□ 0.52
XCR1P46094 STMN4-202ENST00000350889 2288 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
XCR1P46094 AOC3-204ENST00000591562 2522 ntTSL 2 BASIC18.31■□□□□ 0.52
XCR1P46094 ZNF554-201ENST00000317243 2736 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
XCR1P46094 PCGF3-208ENST00000470161 1652 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
XCR1P46094 NFIB-208ENST00000397581 3318 ntTSL 5 BASIC18.31■□□□□ 0.52
XCR1P46094 PTGES2-AS1-201ENST00000443493 2100 ntBASIC18.31■□□□□ 0.52
XCR1P46094 TMEM53-202ENST00000372237 2310 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
XCR1P46094 PRR14-203ENST00000542965 2316 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
XCR1P46094 LGALS9C-209ENST00000581545 1378 ntTSL 5 BASIC18.3■□□□□ 0.52
XCR1P46094 SLC52A2-209ENST00000530047 1757 ntAPPRIS P1 TSL 2 BASIC18.3■□□□□ 0.52
XCR1P46094 STX17-212ENST00000534052 2424 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
XCR1P46094 PIK3R1-201ENST00000320694 2625 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
XCR1P46094 IDUA-201ENST00000247933 2163 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
XCR1P46094 METTL21A-201ENST00000272839 1210 ntTSL 5 BASIC18.3■□□□□ 0.52
XCR1P46094 CARD9-201ENST00000371732 2123 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
XCR1P46094 HDAC11-203ENST00000402271 1018 ntTSL 3 BASIC18.3■□□□□ 0.52
XCR1P46094 PPP1R14BP5-201ENST00000440334 435 ntBASIC18.3■□□□□ 0.52
XCR1P46094 NME6-209ENST00000442597 757 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
XCR1P46094 AL365295.1-202ENST00000456100 562 ntTSL 4 BASIC18.3■□□□□ 0.52
XCR1P46094 LRRC75A-AS1-205ENST00000475953 1201 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
XCR1P46094 KDM2B-217ENST00000543852 1188 ntTSL 5 BASIC18.3■□□□□ 0.52
XCR1P46094 TPGS2-221ENST00000614939 1268 ntTSL 4 BASIC18.3■□□□□ 0.52
XCR1P46094 AC131212.4-201ENST00000623606 975 ntBASIC18.3■□□□□ 0.52
XCR1P46094 KCNC3-203ENST00000477616 3176 ntAPPRIS P2 TSL 1 (best) BASIC18.3■□□□□ 0.52
XCR1P46094 HNRNPLL-206ENST00000410076 1687 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
XCR1P46094 RASSF1-202ENST00000357043 1864 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
XCR1P46094 DMRT2-204ENST00000382251 2292 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
XCR1P46094 TGFBR1-201ENST00000374990 5720 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
XCR1P46094 TMEM214-203ENST00000404032 2830 ntTSL 2 BASIC18.3■□□□□ 0.52
XCR1P46094 ANXA8L1-201ENST00000584982 2174 ntTSL 2 BASIC18.3■□□□□ 0.52
XCR1P46094 PTOV1-AS1-201ENST00000596521 2155 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
XCR1P46094 TBC1D10A-204ENST00000403477 1950 ntAPPRIS ALT2 TSL 2 BASIC18.3■□□□□ 0.52
XCR1P46094 SOX15-201ENST00000250055 1396 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
XCR1P46094 ADGRA2-201ENST00000315215 6270 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
XCR1P46094 ADAP2-201ENST00000330889 2934 ntAPPRIS P2 TSL 1 (best) BASIC18.29■□□□□ 0.52
XCR1P46094 P2RY2-201ENST00000311131 2660 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
XCR1P46094 FOXN3-214ENST00000557258 2692 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
XCR1P46094 MAGED2-203ENST00000375053 2066 ntAPPRIS P2 TSL 1 (best) BASIC18.29■□□□□ 0.52
XCR1P46094 NTRK1-206ENST00000524377 2432 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
XCR1P46094 LIMS2-204ENST00000409286 1678 ntTSL 2 BASIC18.29■□□□□ 0.52
XCR1P46094 PDLIM2-205ENST00000397761 1491 ntAPPRIS P1 TSL 5 BASIC18.29■□□□□ 0.52
XCR1P46094 TSPAN14-205ENST00000372158 1095 ntAPPRIS P1 TSL 5 BASIC18.29■□□□□ 0.52
XCR1P46094 CDKN1B-202ENST00000396340 897 ntTSL 3 BASIC18.29■□□□□ 0.52
XCR1P46094 AL390719.1-201ENST00000427998 977 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
XCR1P46094 RARRES1-204ENST00000479756 839 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
XCR1P46094 FOXN3-AS1-201ENST00000555562 1077 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
XCR1P46094 AC016582.3-201ENST00000589653 561 ntTSL 4 BASIC18.29■□□□□ 0.52
XCR1P46094 AC011445.1-201ENST00000601911 877 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
XCR1P46094 C16orf74-202ENST00000602583 1237 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
XCR1P46094 RBFOX1-215ENST00000553186 2196 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
XCR1P46094 PLCB2-204ENST00000557821 4517 ntAPPRIS ALT1 TSL 1 (best) BASIC18.29■□□□□ 0.52
XCR1P46094 NAGPA-AS1-202ENST00000632058 2265 ntTSL 2 BASIC18.29■□□□□ 0.52
XCR1P46094 TMSB4X-203ENST00000380636 1702 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
XCR1P46094 IL15-208ENST00000529613 1355 ntAPPRIS P1 TSL 5 BASIC18.29■□□□□ 0.52
XCR1P46094 ANKDD1B-204ENST00000601380 2569 ntAPPRIS P1 TSL 5 BASIC18.29■□□□□ 0.52
XCR1P46094 CRB2-202ENST00000373631 5550 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
XCR1P46094 GIT1-201ENST00000225394 3768 ntAPPRIS P3 TSL 1 (best) BASIC18.28■□□□□ 0.52
XCR1P46094 GNA12-201ENST00000275364 4378 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
XCR1P46094 PRSS3-201ENST00000342836 1144 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
XCR1P46094 GLI4-202ENST00000344692 1012 ntTSL 2 BASIC18.28■□□□□ 0.52
XCR1P46094 ELF3-AS1-202ENST00000419190 788 ntTSL 2 BASIC18.28■□□□□ 0.52
XCR1P46094 AC004980.1-204ENST00000429707 299 ntBASIC18.28■□□□□ 0.52
XCR1P46094 BX322234.1-201ENST00000444188 980 ntTSL 3 BASIC18.28■□□□□ 0.52
XCR1P46094 CCDC124-201ENST00000445755 938 ntAPPRIS P1 TSL 2 BASIC18.28■□□□□ 0.52
XCR1P46094 GCFC2-207ENST00000470503 1066 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
XCR1P46094 AKIP1-206ENST00000525005 1128 ntTSL 2 BASIC18.28■□□□□ 0.52
XCR1P46094 AMN1-211ENST00000541931 880 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
XCR1P46094 TMEM263-203ENST00000547242 811 ntAPPRIS P1 TSL 2 BASIC18.28■□□□□ 0.52
XCR1P46094 TMEM235-204ENST00000551068 1187 ntAPPRIS P1 TSL 5 BASIC18.28■□□□□ 0.52
XCR1P46094 AL355075.4-201ENST00000554988 638 ntBASIC18.28■□□□□ 0.52
XCR1P46094 AC026271.3-201ENST00000571884 352 ntBASIC18.28■□□□□ 0.52
XCR1P46094 CCDC124-203ENST00000597436 1055 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
XCR1P46094 AC003005.1-201ENST00000601674 582 ntAPPRIS P5 TSL 2 BASIC18.28■□□□□ 0.52
XCR1P46094 ABBA01031674.1-201ENST00000635145 728 ntBASIC18.28■□□□□ 0.52
XCR1P46094 WDR41-208ENST00000507029 1553 ntTSL 2 BASIC18.28■□□□□ 0.52
XCR1P46094 PAOX-201ENST00000278060 1858 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
XCR1P46094 FAM214B-203ENST00000378561 5771 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
XCR1P46094 CDHR5-201ENST00000349570 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
XCR1P46094 LIPG-203ENST00000577628 2323 ntTSL 2 BASIC18.28■□□□□ 0.52
XCR1P46094 WWOX-205ENST00000539474 1670 ntTSL 5 BASIC18.28■□□□□ 0.52
XCR1P46094 KRT18-207ENST00000550600 1696 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
XCR1P46094 CA11-201ENST00000084798 1844 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
XCR1P46094 ILDR2-203ENST00000469934 1950 ntAPPRIS ALT2 TSL 5 BASIC18.28■□□□□ 0.52
XCR1P46094 ZBTB7B-201ENST00000292176 2129 ntAPPRIS P3 TSL 1 (best) BASIC18.28■□□□□ 0.52
XCR1P46094 PSMB11-201ENST00000408907 2110 ntAPPRIS P1 BASIC18.28■□□□□ 0.52
XCR1P46094 KSR1-205ENST00000509603 2731 ntAPPRIS ALT2 TSL 5 BASIC18.28■□□□□ 0.52
XCR1P46094 NR5A1-202ENST00000373588 3104 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
XCR1P46094 LARGE2-202ENST00000401752 2516 ntAPPRIS P3 TSL 1 (best) BASIC18.27■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 23.2 ms