Protein–RNA interactions for Protein: P35558

PCK1, Phosphoenolpyruvate carboxykinase, cytosolic [GTP], humanhuman

Predictions only

Length 622 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCK1P35558 TMPRSS5-201ENST00000299882 2232 ntAPPRIS P3 TSL 1 (best) BASIC20.18■□□□□ 0.82
PCK1P35558 KCTD18-201ENST00000359878 2940 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
PCK1P35558 FAM217A-208ENST00000639338 1929 ntTSL 5 BASIC20.18■□□□□ 0.82
PCK1P35558 NMRK1-201ENST00000361092 1185 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
PCK1P35558 TMEM35B-201ENST00000373337 922 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
PCK1P35558 HOXB-AS3-204ENST00000466037 522 ntTSL 3 BASIC20.18■□□□□ 0.82
PCK1P35558 CD99P1-205ENST00000527459 561 ntBASIC20.18■□□□□ 0.82
PCK1P35558 AC009052.1-201ENST00000567090 298 ntTSL 3 BASIC20.18■□□□□ 0.82
PCK1P35558 LRRC75A-AS1-225ENST00000581913 1091 ntTSL 2 BASIC20.18■□□□□ 0.82
PCK1P35558 NDUFV2-AS1-201ENST00000582375 770 ntTSL 2 BASIC20.18■□□□□ 0.82
PCK1P35558 SLC6A6-208ENST00000621751 1252 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
PCK1P35558 AC013268.1-201ENST00000639717 1208 ntTSL 5 BASIC20.18■□□□□ 0.82
PCK1P35558 EPOR-201ENST00000222139 2411 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
PCK1P35558 RPL7-202ENST00000396465 1308 ntTSL 3 BASIC20.18■□□□□ 0.82
PCK1P35558 BRAF-201ENST00000288602 2480 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
PCK1P35558 FGF17-201ENST00000359441 1714 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
PCK1P35558 LETM1P2-201ENST00000597330 2178 ntBASIC20.18■□□□□ 0.82
PCK1P35558 MRM3-201ENST00000304478 1809 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
PCK1P35558 SEMA3B-210ENST00000611067 2292 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
PCK1P35558 TLNRD1-201ENST00000267984 4845 ntAPPRIS P1 BASIC20.18■□□□□ 0.82
PCK1P35558 SYTL1-201ENST00000318074 1900 ntTSL 2 BASIC20.17■□□□□ 0.82
PCK1P35558 GCOM1-201ENST00000380568 1516 ntAPPRIS ALT2 TSL 2 BASIC20.17■□□□□ 0.82
PCK1P35558 MRC2-201ENST00000303375 5988 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
PCK1P35558 SEPT2-203ENST00000391971 3315 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
PCK1P35558 SCRIB-201ENST00000320476 5143 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
PCK1P35558 DMRT2-201ENST00000259622 2459 ntTSL 2 BASIC20.17■□□□□ 0.82
PCK1P35558 ASMTL-201ENST00000381317 2027 ntAPPRIS P3 TSL 1 (best) BASIC20.17■□□□□ 0.82
PCK1P35558 SDHAP1-207ENST00000440850 2000 ntBASIC20.17■□□□□ 0.82
PCK1P35558 EARS2-210ENST00000564501 2027 ntTSL 5 BASIC20.17■□□□□ 0.82
PCK1P35558 HMCES-201ENST00000383463 2515 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
PCK1P35558 CEP85L-205ENST00000419517 2079 ntAPPRIS P3 TSL 1 (best) BASIC20.17■□□□□ 0.82
PCK1P35558 TEX21P-204ENST00000641479 1693 ntBASIC20.17■□□□□ 0.82
PCK1P35558 TBC1D4-204ENST00000431480 6347 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
PCK1P35558 C5orf56-203ENST00000378953 942 ntAPPRIS ALT2 TSL 2 BASIC20.17■□□□□ 0.82
PCK1P35558 YWHAZ-209ENST00000419477 891 ntAPPRIS P1 TSL 3 BASIC20.17■□□□□ 0.82
PCK1P35558 BCL2L10-202ENST00000561198 825 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
PCK1P35558 C1QL1P1-201ENST00000568105 661 ntBASIC20.17■□□□□ 0.82
PCK1P35558 ELAC1-203ENST00000588577 694 ntTSL 2 BASIC20.17■□□□□ 0.82
PCK1P35558 CORO1B-210ENST00000627576 960 ntTSL 5 BASIC20.17■□□□□ 0.82
PCK1P35558 NLGN2-204ENST00000575301 4374 ntAPPRIS P1 TSL 5 BASIC20.17■□□□□ 0.82
PCK1P35558 MRPL4-202ENST00000307422 1320 ntAPPRIS P2 TSL 5 BASIC20.17■□□□□ 0.82
PCK1P35558 UNC5D-204ENST00000420357 2966 ntTSL 5 BASIC20.17■□□□□ 0.82
PCK1P35558 ADGRD2-201ENST00000334810 3244 ntAPPRIS P1 TSL 5 BASIC20.17■□□□□ 0.82
PCK1P35558 WRNIP1-202ENST00000380769 3239 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
PCK1P35558 HMBS-214ENST00000542729 1469 ntTSL 2 BASIC20.17■□□□□ 0.82
PCK1P35558 GGT6-202ENST00000381550 2145 ntTSL 2 BASIC20.17■□□□□ 0.82
PCK1P35558 PSMB11-201ENST00000408907 2110 ntAPPRIS P1 BASIC20.17■□□□□ 0.82
PCK1P35558 SNAPC2-201ENST00000221573 1542 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
PCK1P35558 TMEM175-220ENST00000515740 1514 ntTSL 3 BASIC20.17■□□□□ 0.82
PCK1P35558 FAM239A-202ENST00000438107 2155 ntTSL 5 BASIC20.17■□□□□ 0.82
PCK1P35558 GCSH-201ENST00000315467 1597 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
PCK1P35558 CORO1A-216ENST00000570045 1622 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
PCK1P35558 PHF12-201ENST00000268756 2957 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
PCK1P35558 CADPS2-202ENST00000334010 6045 ntAPPRIS ALT2 TSL 5 BASIC20.16■□□□□ 0.82
PCK1P35558 AOC3-204ENST00000591562 2522 ntTSL 2 BASIC20.16■□□□□ 0.82
PCK1P35558 CNOT11-201ENST00000289382 2599 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
PCK1P35558 MFHAS1-201ENST00000276282 6414 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
PCK1P35558 FAM87B-201ENST00000326734 1947 ntTSL 2 BASIC20.16■□□□□ 0.82
PCK1P35558 EEF1A1-203ENST00000331523 1923 ntAPPRIS P1 TSL 5 BASIC20.16■□□□□ 0.82
PCK1P35558 GTF3C5-201ENST00000342018 1905 ntTSL 5 BASIC20.16■□□□□ 0.82
PCK1P35558 SLC23A3-201ENST00000295738 2037 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
PCK1P35558 OSTM1-201ENST00000193322 4467 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
PCK1P35558 MARK2-201ENST00000350490 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
PCK1P35558 FAM46A-203ENST00000369756 5537 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
PCK1P35558 AGTRAP-203ENST00000376629 1100 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
PCK1P35558 NUDT8-202ENST00000376693 728 ntAPPRIS ALT2 TSL 2 BASIC20.16■□□□□ 0.82
PCK1P35558 METTL21A-204ENST00000425132 869 ntTSL 2 BASIC20.16■□□□□ 0.82
PCK1P35558 AL162258.1-201ENST00000497086 753 ntTSL 2 BASIC20.16■□□□□ 0.82
PCK1P35558 ITGB7-209ENST00000550743 2138 ntTSL 5 BASIC20.16■□□□□ 0.82
PCK1P35558 AL023875.1-201ENST00000640777 796 ntBASIC20.16■□□□□ 0.82
PCK1P35558 UBE2K-203ENST00000445950 2175 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
PCK1P35558 ILKAP-201ENST00000254654 1490 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
PCK1P35558 SORCS3-201ENST00000369699 5530 ntAPPRIS P1 TSL 5 BASIC20.16■□□□□ 0.82
PCK1P35558 P4HB-203ENST00000439918 1502 ntTSL 5 BASIC20.16■□□□□ 0.82
PCK1P35558 AC012414.5-201ENST00000564214 1602 ntTSL 5 BASIC20.16■□□□□ 0.82
PCK1P35558 ENTPD6-202ENST00000360031 2766 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
PCK1P35558 ZKSCAN7-205ENST00000426540 2791 ntAPPRIS P1 TSL 2 BASIC20.16■□□□□ 0.82
PCK1P35558 DUSP15-209ENST00000486996 1651 ntTSL 2 BASIC20.16■□□□□ 0.82
PCK1P35558 ISLR2-208ENST00000565159 2824 ntAPPRIS P1 TSL 3 BASIC20.16■□□□□ 0.82
PCK1P35558 DNLZ-202ENST00000371739 2934 ntTSL 5 BASIC20.16■□□□□ 0.82
PCK1P35558 ZNF839-202ENST00000442396 2987 ntAPPRIS P3 TSL 5 BASIC20.16■□□□□ 0.82
PCK1P35558 PLCH2-205ENST00000449969 5450 ntTSL 5 BASIC20.16■□□□□ 0.82
PCK1P35558 TREX2-203ENST00000338525 2116 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
PCK1P35558 FBXL16-203ENST00000562563 2257 ntTSL 2 BASIC20.15■□□□□ 0.82
PCK1P35558 SPRYD7-204ENST00000613924 2285 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
PCK1P35558 LARGE2-206ENST00000529052 2459 ntAPPRIS ALT2 TSL 2 BASIC20.15■□□□□ 0.82
PCK1P35558 GRAMD2B-219ENST00000544396 2822 ntTSL 2 BASIC20.15■□□□□ 0.82
PCK1P35558 RBM15B-201ENST00000563281 6641 ntAPPRIS P1 BASIC20.15■□□□□ 0.82
PCK1P35558 COX7A2L-201ENST00000234301 1112 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
PCK1P35558 MRPL12-201ENST00000333676 1028 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
PCK1P35558 SERF2-207ENST00000409614 582 ntTSL 2 BASIC20.15■□□□□ 0.82
PCK1P35558 AC239809.2-201ENST00000415381 517 ntBASIC20.15■□□□□ 0.82
PCK1P35558 AC133681.1-201ENST00000465482 601 ntBASIC20.15■□□□□ 0.82
PCK1P35558 C1orf52-203ENST00000471115 1219 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
PCK1P35558 OPA3-203ENST00000544371 1146 ntTSL 2 BASIC20.15■□□□□ 0.82
PCK1P35558 RN7SL471P-201ENST00000580476 299 ntBASIC20.15■□□□□ 0.82
PCK1P35558 TMEM191B-203ENST00000613597 366 ntAPPRIS ALT2 TSL 5 BASIC20.15■□□□□ 0.82
PCK1P35558 AC073648.6-201ENST00000641589 218 ntBASIC20.15■□□□□ 0.82
PCK1P35558 POU5F1-201ENST00000259915 1420 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
PCK1P35558 NAT6-204ENST00000443094 1464 ntAPPRIS ALT2 TSL 1 (best) BASIC20.15■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 31.1 ms