Protein–RNA interactions for Protein: P31273

HOXC8, Homeobox protein Hox-C8, humanhuman

Predictions only

Length 242 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC8P31273 CA7-202ENST00000394069 1713 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
HOXC8P31273 LINC01311-201ENST00000565162 1445 ntBASIC20.98■□□□□ 0.95
HOXC8P31273 HBZP1-201ENST00000354915 429 ntBASIC20.98■□□□□ 0.95
HOXC8P31273 FXN-203ENST00000396366 922 ntTSL 2 BASIC20.98■□□□□ 0.95
HOXC8P31273 LINC00421-201ENST00000413833 1054 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
HOXC8P31273 FIS1-207ENST00000474120 915 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
HOXC8P31273 AC106771.1-201ENST00000502209 372 ntTSL 2 BASIC20.98■□□□□ 0.95
HOXC8P31273 NEK7-207ENST00000538004 1036 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
HOXC8P31273 SLF2-205ENST00000609386 891 ntAPPRIS ALT2 BASIC20.98■□□□□ 0.95
HOXC8P31273 TXNDC12-205ENST00000610127 806 ntTSL 2 BASIC20.98■□□□□ 0.95
HOXC8P31273 ZNF534-205ENST00000617900 1085 ntTSL 2 BASIC20.98■□□□□ 0.95
HOXC8P31273 DNAJB6-218ENST00000634080 1005 ntTSL 2 BASIC20.98■□□□□ 0.95
HOXC8P31273 MAP3K11-210ENST00000532507 1812 ntTSL 2 BASIC20.98■□□□□ 0.95
HOXC8P31273 IFRD1-201ENST00000005558 1834 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
HOXC8P31273 UAP1-201ENST00000271469 2377 ntAPPRIS ALT1 TSL 5 BASIC20.98■□□□□ 0.95
HOXC8P31273 FAM189B-201ENST00000350210 2379 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
HOXC8P31273 ARFRP1-214ENST00000622789 2559 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
HOXC8P31273 NUDT16L1-201ENST00000304301 1349 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
HOXC8P31273 ACAP3-201ENST00000353662 2280 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
HOXC8P31273 CCDC106-201ENST00000308964 1546 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
HOXC8P31273 ADAP1-218ENST00000617043 1946 ntTSL 2 BASIC20.98■□□□□ 0.95
HOXC8P31273 SMN2-202ENST00000380742 1388 ntAPPRIS ALT2 TSL 5 BASIC20.97■□□□□ 0.95
HOXC8P31273 PPM1L-204ENST00000497343 1589 ntTSL 2 BASIC20.97■□□□□ 0.95
HOXC8P31273 C18orf21-205ENST00000592875 1581 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
HOXC8P31273 GRINA-201ENST00000313269 1968 ntAPPRIS P1 TSL 5 BASIC20.97■□□□□ 0.95
HOXC8P31273 ITGBL1-206ENST00000618057 2368 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
HOXC8P31273 MANEAL-202ENST00000373045 2685 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
HOXC8P31273 HDGFL2-208ENST00000616600 2281 ntAPPRIS P3 TSL 1 (best) BASIC20.97■□□□□ 0.95
HOXC8P31273 TMEM268-202ENST00000374049 4578 ntAPPRIS ALT1 TSL 5 BASIC20.97■□□□□ 0.95
HOXC8P31273 KCNC3-201ENST00000376959 5447 ntAPPRIS ALT2 TSL 5 BASIC20.97■□□□□ 0.95
HOXC8P31273 RPA2-201ENST00000313433 1237 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
HOXC8P31273 CHTOP-202ENST00000368687 1094 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
HOXC8P31273 AL023284.2-201ENST00000405850 579 ntBASIC20.97■□□□□ 0.95
HOXC8P31273 DUSP5P1-201ENST00000441325 1139 ntBASIC20.97■□□□□ 0.95
HOXC8P31273 AC011773.3-202ENST00000549291 790 ntTSL 3 BASIC20.97■□□□□ 0.95
HOXC8P31273 KRT126P-201ENST00000549467 1181 ntBASIC20.97■□□□□ 0.95
HOXC8P31273 ANKRD34C-AS1-203ENST00000559225 528 ntTSL 4 BASIC20.97■□□□□ 0.95
HOXC8P31273 FGF14-AS2-201ENST00000606448 1074 ntBASIC20.97■□□□□ 0.95
HOXC8P31273 AC069148.1-201ENST00000608741 768 ntBASIC20.97■□□□□ 0.95
HOXC8P31273 SLC35D3-201ENST00000331858 2359 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
HOXC8P31273 TFEB-211ENST00000420312 1996 ntTSL 5 BASIC20.97■□□□□ 0.95
HOXC8P31273 SLC39A5-209ENST00000454355 1968 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
HOXC8P31273 VGF-201ENST00000249330 2575 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
HOXC8P31273 TCP11-204ENST00000373979 1882 ntAPPRIS P3 TSL 5 BASIC20.96■□□□□ 0.95
HOXC8P31273 SYT8-202ENST00000381968 1424 ntAPPRIS P2 TSL 5 BASIC20.96■□□□□ 0.95
HOXC8P31273 IFNL4-203ENST00000634680 1421 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
HOXC8P31273 SYT5-202ENST00000537500 2612 ntAPPRIS P1 TSL 2 BASIC20.96■□□□□ 0.95
HOXC8P31273 ZDHHC14-204ENST00000414563 3134 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
HOXC8P31273 TNFRSF1A-213ENST00000540022 1527 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
HOXC8P31273 AL596442.1-201ENST00000429305 429 ntTSL 2 BASIC20.96■□□□□ 0.95
HOXC8P31273 SPAG16-207ENST00000432529 1250 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
HOXC8P31273 LINC00599-204ENST00000521242 716 ntTSL 3 BASIC20.96■□□□□ 0.95
HOXC8P31273 AC087623.2-201ENST00000528407 534 ntTSL 4 BASIC20.96■□□□□ 0.95
HOXC8P31273 C12orf43-206ENST00000537817 1270 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
HOXC8P31273 METRN-205ENST00000568415 612 ntAPPRIS ALT2 TSL 3 BASIC20.96■□□□□ 0.95
HOXC8P31273 YPEL3-202ENST00000398841 1588 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
HOXC8P31273 NTMT1-211ENST00000617943 1346 ntTSL 3 BASIC20.96■□□□□ 0.95
HOXC8P31273 LY6K-201ENST00000292430 2671 ntAPPRIS P3 TSL 1 (best) BASIC20.96■□□□□ 0.95
HOXC8P31273 RELA-201ENST00000308639 2681 ntAPPRIS ALT1 TSL 1 (best) BASIC20.96■□□□□ 0.95
HOXC8P31273 QKI-207ENST00000453779 5685 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
HOXC8P31273 SCRT2-201ENST00000246104 3577 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
HOXC8P31273 MOK-201ENST00000361847 1940 ntAPPRIS P3 TSL 1 (best) BASIC20.96■□□□□ 0.95
HOXC8P31273 ADD1-202ENST00000355842 4743 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
HOXC8P31273 KRT8P3-201ENST00000519669 1449 ntBASIC20.95■□□□□ 0.95
HOXC8P31273 GLB1-201ENST00000307363 2616 ntAPPRIS P4 TSL 1 (best) BASIC20.95■□□□□ 0.94
HOXC8P31273 OSBPL10-204ENST00000438237 2624 ntAPPRIS ALT2 TSL 2 BASIC20.95■□□□□ 0.94
HOXC8P31273 DNAJB11-202ENST00000439351 2398 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
HOXC8P31273 TRIB3-201ENST00000217233 2499 ntAPPRIS P3 TSL 1 (best) BASIC20.95■□□□□ 0.94
HOXC8P31273 FUOM-201ENST00000278025 709 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
HOXC8P31273 KRT18P48-201ENST00000434763 852 ntBASIC20.95■□□□□ 0.94
HOXC8P31273 AP000347.1-209ENST00000437294 557 ntTSL 4 BASIC20.95■□□□□ 0.94
HOXC8P31273 RASA4DP-201ENST00000460726 1199 ntBASIC20.95■□□□□ 0.94
HOXC8P31273 MIR1302-2HG-202ENST00000473358 712 ntTSL 5 BASIC20.95■□□□□ 0.94
HOXC8P31273 AC140725.1-202ENST00000561145 712 ntTSL 5 BASIC20.95■□□□□ 0.94
HOXC8P31273 TBC1D10A-204ENST00000403477 1950 ntAPPRIS ALT2 TSL 2 BASIC20.95■□□□□ 0.94
HOXC8P31273 SRRM2-AS1-203ENST00000571305 1344 ntTSL 2 BASIC20.95■□□□□ 0.94
HOXC8P31273 STARD3-209ENST00000544210 1666 ntTSL 2 BASIC20.95■□□□□ 0.94
HOXC8P31273 RNF113B-201ENST00000267291 1376 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
HOXC8P31273 BTNL9-210ENST00000515271 1444 ntTSL 2 BASIC20.95■□□□□ 0.94
HOXC8P31273 TCP11-202ENST00000311875 2166 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.94
HOXC8P31273 NR1H2-202ENST00000411902 1466 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
HOXC8P31273 DNAAF3-207ENST00000527223 2228 ntAPPRIS ALT2 TSL 2 BASIC20.94■□□□□ 0.94
HOXC8P31273 CYP2A7-202ENST00000301146 2281 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
HOXC8P31273 ACSF3-202ENST00000378345 1541 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
HOXC8P31273 PNKP-224ENST00000631020 1545 ntTSL 5 BASIC20.94■□□□□ 0.94
HOXC8P31273 LTK-202ENST00000355166 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
HOXC8P31273 IRF5-202ENST00000357234 1680 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
HOXC8P31273 PTAR1-205ENST00000472967 1689 ntTSL 2 BASIC20.94■□□□□ 0.94
HOXC8P31273 ZBED3-AS1-208ENST00000512001 1668 ntTSL 3 BASIC20.94■□□□□ 0.94
HOXC8P31273 KRT18-207ENST00000550600 1696 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
HOXC8P31273 KCNMB3-202ENST00000349697 1228 ntAPPRIS P1 TSL 5 BASIC20.94■□□□□ 0.94
HOXC8P31273 SDCBP2-203ENST00000381808 1261 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
HOXC8P31273 ZMYM5-203ENST00000382907 1092 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
HOXC8P31273 AGBL5-AS1-201ENST00000444217 407 ntTSL 5 BASIC20.94■□□□□ 0.94
HOXC8P31273 AC022424.1-201ENST00000512155 889 ntTSL 3 BASIC20.94■□□□□ 0.94
HOXC8P31273 REPIN1-217ENST00000518514 478 ntTSL 3 BASIC20.94■□□□□ 0.94
HOXC8P31273 AP003396.3-201ENST00000530918 778 ntTSL 5 BASIC20.94■□□□□ 0.94
HOXC8P31273 AP1S2-206ENST00000545766 576 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
HOXC8P31273 LINC00910-203ENST00000587874 544 ntTSL 4 BASIC20.94■□□□□ 0.94
HOXC8P31273 AC093458.2-201ENST00000623150 629 ntBASIC20.94■□□□□ 0.94
Retrieved 100 of 98,524 protein–RNA pairs in 43.8 ms