Protein–RNA interactions for Protein: P25440

BRD2, Bromodomain-containing protein 2, humanhuman

Known RBP Predictions only

Length 801 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRD2P25440 SFXN1-203ENST00000502393 637 ntTSL 2 BASIC20.58■□□□□ 0.89
BRD2P25440 UBE2K-204ENST00000503368 891 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
BRD2P25440 CXXC5-AS1-201ENST00000514287 577 ntTSL 4 BASIC20.58■□□□□ 0.89
BRD2P25440 DDN-AS1-201ENST00000547395 858 ntTSL 2 BASIC20.58■□□□□ 0.89
BRD2P25440 FLT3LG-211ENST00000600429 984 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
BRD2P25440 AL158152.2-201ENST00000602703 235 ntTSL 3 BASIC20.58■□□□□ 0.89
BRD2P25440 TPGS2-221ENST00000614939 1268 ntTSL 4 BASIC20.58■□□□□ 0.89
BRD2P25440 LDHD-201ENST00000300051 2067 ntAPPRIS P3 TSL 1 (best) BASIC20.58■□□□□ 0.88
BRD2P25440 ITPKB-203ENST00000429204 6162 ntAPPRIS P1 TSL 5 BASIC20.58■□□□□ 0.88
BRD2P25440 MCIDAS-201ENST00000513312 1736 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
BRD2P25440 SLC34A3-202ENST00000538474 2162 ntAPPRIS P1 TSL 5 BASIC20.58■□□□□ 0.88
BRD2P25440 ZNF346-201ENST00000358149 2314 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
BRD2P25440 UBE2Z-201ENST00000360943 3122 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
BRD2P25440 AC126773.2-201ENST00000562172 1682 ntTSL 3 BASIC20.58■□□□□ 0.88
BRD2P25440 ILDR2-203ENST00000469934 1950 ntAPPRIS ALT2 TSL 5 BASIC20.57■□□□□ 0.88
BRD2P25440 ILKAP-201ENST00000254654 1490 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
BRD2P25440 DNAH17-AS1-202ENST00000591373 1453 ntTSL 5 BASIC20.57■□□□□ 0.88
BRD2P25440 FBXO46-201ENST00000317683 3001 ntAPPRIS P1 TSL 2 BASIC20.57■□□□□ 0.88
BRD2P25440 LRRC1-202ENST00000370888 3180 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
BRD2P25440 TTC34-201ENST00000401095 8814 ntAPPRIS ALT2 TSL 5 BASIC20.57■□□□□ 0.88
BRD2P25440 FAM83H-201ENST00000388913 5654 ntAPPRIS P1 TSL 5 BASIC20.57■□□□□ 0.88
BRD2P25440 COL9A3-201ENST00000343916 2485 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
BRD2P25440 S100A14-203ENST00000368701 1080 ntAPPRIS P1 TSL 2 BASIC20.57■□□□□ 0.88
BRD2P25440 TESC-AS1-201ENST00000547006 1053 ntTSL 2 BASIC20.57■□□□□ 0.88
BRD2P25440 PPFIA1-201ENST00000253925 5234 ntAPPRIS P4 TSL 1 (best) BASIC20.57■□□□□ 0.88
BRD2P25440 ITGB7-209ENST00000550743 2138 ntTSL 5 BASIC20.57■□□□□ 0.88
BRD2P25440 MELTF-202ENST00000296351 1650 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
BRD2P25440 CABP7-201ENST00000216144 3259 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
BRD2P25440 GRM5-202ENST00000305447 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
BRD2P25440 KCNN2-208ENST00000631899 2098 ntAPPRIS ALT2 TSL 5 BASIC20.57■□□□□ 0.88
BRD2P25440 SMIM4-203ENST00000477703 1770 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
BRD2P25440 DISC1-202ENST00000317586 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
BRD2P25440 SLC35A3-205ENST00000465289 5696 ntAPPRIS P1 TSL 5 BASIC20.56■□□□□ 0.88
BRD2P25440 PLCB2-204ENST00000557821 4517 ntAPPRIS ALT1 TSL 1 (best) BASIC20.56■□□□□ 0.88
BRD2P25440 MLX-201ENST00000246912 2586 ntAPPRIS P3 TSL 1 (best) BASIC20.56■□□□□ 0.88
BRD2P25440 GNA12-201ENST00000275364 4378 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
BRD2P25440 PCID2-202ENST00000337344 1898 ntAPPRIS P1 TSL 2 BASIC20.56■□□□□ 0.88
BRD2P25440 CXXC4-201ENST00000394767 5565 ntAPPRIS P1 TSL 5 BASIC20.56■□□□□ 0.88
BRD2P25440 AC008691.1-203ENST00000515337 1580 ntTSL 2 BASIC20.56■□□□□ 0.88
BRD2P25440 LTB4R2-202ENST00000528054 3092 ntBASIC20.56■□□□□ 0.88
BRD2P25440 PRDX1-201ENST00000262746 1234 ntAPPRIS P1 TSL 5 BASIC20.56■□□□□ 0.88
BRD2P25440 PDCD2-202ENST00000392090 936 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
BRD2P25440 ANKRD54-204ENST00000411961 946 ntTSL 5 BASIC20.56■□□□□ 0.88
BRD2P25440 SMG1P1-207ENST00000446662 852 ntTSL 5 BASIC20.56■□□□□ 0.88
BRD2P25440 Z98884.1-201ENST00000451646 830 ntTSL 3 BASIC20.56■□□□□ 0.88
BRD2P25440 HLX-AS1-201ENST00000552026 563 ntTSL 4 BASIC20.56■□□□□ 0.88
BRD2P25440 BRAF-201ENST00000288602 2480 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
BRD2P25440 PRR14-203ENST00000542965 2316 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
BRD2P25440 CYP2E1-205ENST00000463117 1912 ntAPPRIS P1 TSL 5 BASIC20.56■□□□□ 0.88
BRD2P25440 PFKFB3-204ENST00000379785 2181 ntTSL 5 BASIC20.56■□□□□ 0.88
BRD2P25440 CSF1-203ENST00000369801 1364 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
BRD2P25440 FOXN3-214ENST00000557258 2692 ntAPPRIS P3 TSL 1 (best) BASIC20.56■□□□□ 0.88
BRD2P25440 PEX16-210ENST00000532681 1639 ntTSL 3 BASIC20.56■□□□□ 0.88
BRD2P25440 RIMBP3C-202ENST00000433039 5784 ntAPPRIS P2 BASIC20.56■□□□□ 0.88
BRD2P25440 B3GALNT2-201ENST00000313984 1874 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
BRD2P25440 TREX2-203ENST00000338525 2116 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
BRD2P25440 MATN4-202ENST00000360607 2127 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
BRD2P25440 KCNMA1-293ENST00000640969 5789 ntAPPRIS ALT2 TSL 5 BASIC20.55■□□□□ 0.88
BRD2P25440 FAM109B-201ENST00000321753 2335 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
BRD2P25440 LRCH4-201ENST00000310300 2552 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
BRD2P25440 SYTL1-201ENST00000318074 1900 ntTSL 2 BASIC20.55■□□□□ 0.88
BRD2P25440 C6orf89-203ENST00000373685 1400 ntAPPRIS ALT2 TSL 5 BASIC20.55■□□□□ 0.88
BRD2P25440 RELB-201ENST00000221452 2294 ntAPPRIS P2 TSL 1 (best) BASIC20.55■□□□□ 0.88
BRD2P25440 RBM45-201ENST00000286070 1785 ntAPPRIS P2 TSL 1 (best) BASIC20.55■□□□□ 0.88
BRD2P25440 C6orf132-202ENST00000356542 894 ntAPPRIS ALT2 TSL 2 BASIC20.55■□□□□ 0.88
BRD2P25440 FDX2-207ENST00000494368 584 ntTSL 4 BASIC20.55■□□□□ 0.88
BRD2P25440 DLEU7-203ENST00000504404 1122 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
BRD2P25440 CFAP77-203ENST00000393216 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
BRD2P25440 PHLDB3-201ENST00000292140 2591 ntAPPRIS P1 TSL 5 BASIC20.55■□□□□ 0.88
BRD2P25440 ITPKB-202ENST00000366784 3146 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
BRD2P25440 TXNRD3-205ENST00000640797 1824 ntAPPRIS ALT2 TSL 2 BASIC20.55■□□□□ 0.88
BRD2P25440 SLC25A3-201ENST00000188376 1909 ntAPPRIS ALT1 TSL 1 (best) BASIC20.55■□□□□ 0.88
BRD2P25440 AGPAT5-201ENST00000285518 3685 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
BRD2P25440 ASMTL-202ENST00000381333 2035 ntAPPRIS ALT2 TSL 2 BASIC20.54■□□□□ 0.88
BRD2P25440 HNRNPLL-206ENST00000410076 1687 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
BRD2P25440 FLT1-209ENST00000639477 6337 ntTSL 5 BASIC20.54■□□□□ 0.88
BRD2P25440 FAM214B-203ENST00000378561 5771 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
BRD2P25440 P3H4-202ENST00000393928 2601 ntAPPRIS P2 TSL 1 (best) BASIC20.54■□□□□ 0.88
BRD2P25440 ZNRF1-202ENST00000335325 4620 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
BRD2P25440 LINC00511-201ENST00000453722 1716 ntTSL 2 BASIC20.54■□□□□ 0.88
BRD2P25440 INSR-201ENST00000302850 4721 ntAPPRIS P3 TSL 1 (best) BASIC20.54■□□□□ 0.88
BRD2P25440 SGO1-209ENST00000442720 2266 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
BRD2P25440 IZUMO2-201ENST00000293405 728 ntAPPRIS P2 TSL 1 (best) BASIC20.54■□□□□ 0.88
BRD2P25440 CMTM8-201ENST00000307526 1174 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
BRD2P25440 LGALS7-201ENST00000378626 466 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
BRD2P25440 CCT7-202ENST00000398422 1234 ntTSL 2 BASIC20.54■□□□□ 0.88
BRD2P25440 TSPAN4-209ENST00000409543 1031 ntAPPRIS P1 TSL 5 BASIC20.54■□□□□ 0.88
BRD2P25440 AL590666.2-201ENST00000448869 758 ntTSL 2 BASIC20.54■□□□□ 0.88
BRD2P25440 RPS2P4-201ENST00000476944 856 ntBASIC20.54■□□□□ 0.88
BRD2P25440 SNX5-213ENST00000486039 602 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
BRD2P25440 AP002982.1-201ENST00000492365 877 ntBASIC20.54■□□□□ 0.88
BRD2P25440 AC019257.1-201ENST00000517676 557 ntTSL 5 BASIC20.54■□□□□ 0.88
BRD2P25440 AC090877.2-202ENST00000560363 574 ntTSL 2 BASIC20.54■□□□□ 0.88
BRD2P25440 RARRES2P10-201ENST00000564312 460 ntBASIC20.54■□□□□ 0.88
BRD2P25440 AC091551.1-201ENST00000590722 1228 ntAPPRIS P1 TSL 2 BASIC20.54■□□□□ 0.88
BRD2P25440 CROCCP4-202ENST00000633627 573 ntTSL 3 BASIC20.54■□□□□ 0.88
BRD2P25440 ZNF281-202ENST00000367352 2933 ntAPPRIS ALT2 TSL 2 BASIC20.54■□□□□ 0.88
BRD2P25440 SH2B1-216ENST00000618521 2935 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
BRD2P25440 ST3GAL4-217ENST00000534083 1919 ntAPPRIS ALT1 TSL 5 BASIC20.54■□□□□ 0.88
BRD2P25440 LGALS9C-209ENST00000581545 1378 ntTSL 5 BASIC20.54■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 57.9 ms