Protein–RNA interactions for Protein: P22894

MMP8, Neutrophil collagenase, humanhuman

Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MMP8P22894 SIGLEC14-201ENST00000360844 2035 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.83
MMP8P22894 SLC27A1-204ENST00000598424 2681 ntTSL 2 BASIC20.2■□□□□ 0.82
MMP8P22894 P2RY6-203ENST00000393591 1829 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
MMP8P22894 GOLGA6L5P-202ENST00000515341 1828 ntBASIC20.2■□□□□ 0.82
MMP8P22894 SRSF2-202ENST00000359995 1927 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
MMP8P22894 GAS2L1P1-201ENST00000420145 1480 ntBASIC20.2■□□□□ 0.82
MMP8P22894 CYP2F1-201ENST00000331105 1720 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
MMP8P22894 KTI12-201ENST00000371614 1714 ntAPPRIS P1 BASIC20.2■□□□□ 0.82
MMP8P22894 CLDND2-201ENST00000291715 974 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
MMP8P22894 ABHD17AP1-201ENST00000358206 933 ntBASIC20.2■□□□□ 0.82
MMP8P22894 FAM86C1-203ENST00000426628 952 ntAPPRIS ALT2 TSL 2 BASIC20.2■□□□□ 0.82
MMP8P22894 AC005056.1-201ENST00000435932 532 ntTSL 4 BASIC20.2■□□□□ 0.82
MMP8P22894 ABCC5-211ENST00000446941 883 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
MMP8P22894 AL691442.1-201ENST00000505139 1042 ntAPPRIS P1 TSL 2 BASIC20.2■□□□□ 0.82
MMP8P22894 NDUFS3-212ENST00000534208 583 ntTSL 4 BASIC20.2■□□□□ 0.82
MMP8P22894 TMEM72-203ENST00000544540 1018 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
MMP8P22894 AC100835.1-201ENST00000565737 498 ntTSL 5 BASIC20.2■□□□□ 0.82
MMP8P22894 AC091551.1-201ENST00000590722 1228 ntAPPRIS P1 TSL 2 BASIC20.2■□□□□ 0.82
MMP8P22894 AC011446.2-202ENST00000592882 756 ntTSL 3 BASIC20.2■□□□□ 0.82
MMP8P22894 NOP14-AS1-202ENST00000505731 1999 ntTSL 2 BASIC20.2■□□□□ 0.82
MMP8P22894 AC073107.1-201ENST00000633579 1962 ntTSL 5 BASIC20.2■□□□□ 0.82
MMP8P22894 NFE2-204ENST00000553070 1523 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
MMP8P22894 SLC31A2-201ENST00000259392 1785 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
MMP8P22894 MAPT-203ENST00000340799 5724 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
MMP8P22894 AC006333.2-201ENST00000607957 2099 ntBASIC20.2■□□□□ 0.82
MMP8P22894 GTF3A-201ENST00000381140 1383 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
MMP8P22894 AC011944.1-201ENST00000316148 1900 ntTSL 2 BASIC20.19■□□□□ 0.82
MMP8P22894 ACTR3B-203ENST00000397282 1692 ntTSL 2 BASIC20.19■□□□□ 0.82
MMP8P22894 CD177-203ENST00000618265 2222 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
MMP8P22894 SLC3A2-202ENST00000377889 1993 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
MMP8P22894 GABBR1-202ENST00000376977 1739 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
MMP8P22894 CDC42EP2-201ENST00000279249 2023 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
MMP8P22894 PDP1-208ENST00000520728 2554 ntAPPRIS P3 TSL 1 (best) BASIC20.19■□□□□ 0.82
MMP8P22894 ATXN7L2-202ENST00000369870 2318 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
MMP8P22894 GRM5-202ENST00000305447 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
MMP8P22894 RABEPK-202ENST00000373538 1504 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
MMP8P22894 RAB11FIP5-201ENST00000258098 4342 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
MMP8P22894 KRTCAP3-201ENST00000288873 872 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
MMP8P22894 COX7A1-201ENST00000292907 762 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
MMP8P22894 ANKRD54-204ENST00000411961 946 ntTSL 5 BASIC20.19■□□□□ 0.82
MMP8P22894 RAB29-203ENST00000414729 1157 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
MMP8P22894 GCSHP5-201ENST00000443090 522 ntBASIC20.19■□□□□ 0.82
MMP8P22894 BABAM1-202ENST00000447614 930 ntAPPRIS ALT2 TSL 5 BASIC20.19■□□□□ 0.82
MMP8P22894 SNX5-213ENST00000486039 602 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
MMP8P22894 AC091564.5-201ENST00000526456 820 ntTSL 4 BASIC20.19■□□□□ 0.82
MMP8P22894 METTL23-208ENST00000588822 1049 ntTSL 3 BASIC20.19■□□□□ 0.82
MMP8P22894 SPIB-206ENST00000596074 847 ntTSL 2 BASIC20.19■□□□□ 0.82
MMP8P22894 FLT3LG-211ENST00000600429 984 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
MMP8P22894 ABBA01031674.1-201ENST00000635145 728 ntBASIC20.19■□□□□ 0.82
MMP8P22894 KAZN-209ENST00000636564 1197 ntTSL 5 BASIC20.19■□□□□ 0.82
MMP8P22894 P2RY6-212ENST00000618468 2431 ntAPPRIS P1 TSL 3 BASIC20.19■□□□□ 0.82
MMP8P22894 CTDP1-208ENST00000613122 5866 ntAPPRIS P3 TSL 1 (best) BASIC20.19■□□□□ 0.82
MMP8P22894 ANKDD1B-204ENST00000601380 2569 ntAPPRIS P1 TSL 5 BASIC20.19■□□□□ 0.82
MMP8P22894 SNAI3-201ENST00000332281 1732 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
MMP8P22894 LINC00511-201ENST00000453722 1716 ntTSL 2 BASIC20.19■□□□□ 0.82
MMP8P22894 ORAI2-204ENST00000473939 2493 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
MMP8P22894 SERGEF-201ENST00000265965 1566 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
MMP8P22894 CYP46A1-202ENST00000380228 1597 ntTSL 2 BASIC20.18■□□□□ 0.82
MMP8P22894 OGFOD2-207ENST00000536150 1956 ntTSL 2 BASIC20.18■□□□□ 0.82
MMP8P22894 CTAG2-201ENST00000247306 993 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
MMP8P22894 CAPN10-202ENST00000270364 1267 ntTSL 2 BASIC20.18■□□□□ 0.82
MMP8P22894 SMIM19-201ENST00000414154 793 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
MMP8P22894 UBE2K-204ENST00000503368 891 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
MMP8P22894 MOK-228ENST00000523231 1114 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
MMP8P22894 AC142381.4-202ENST00000563973 229 ntBASIC20.18■□□□□ 0.82
MMP8P22894 ZNF667-AS1-206ENST00000591797 535 ntTSL 5 BASIC20.18■□□□□ 0.82
MMP8P22894 AC093503.3-201ENST00000624917 2352 ntBASIC20.18■□□□□ 0.82
MMP8P22894 ZNF394-203ENST00000426306 2017 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
MMP8P22894 AC004408.2-201ENST00000623613 2777 ntBASIC20.18■□□□□ 0.82
MMP8P22894 HSD11B1L-221ENST00000583928 1319 ntTSL 5 BASIC20.18■□□□□ 0.82
MMP8P22894 TMEM191C-214ENST00000621561 1337 ntAPPRIS P2 TSL 5 BASIC20.18■□□□□ 0.82
MMP8P22894 PTH2R-204ENST00000617735 2472 ntTSL 2 BASIC20.18■□□□□ 0.82
MMP8P22894 KIF1BP-201ENST00000361983 2544 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
MMP8P22894 NRXN1-202ENST00000342183 3315 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
MMP8P22894 NFIB-208ENST00000397581 3318 ntTSL 5 BASIC20.18■□□□□ 0.82
MMP8P22894 ACVR1B-205ENST00000541224 1791 ntTSL 2 BASIC20.18■□□□□ 0.82
MMP8P22894 KRT16P1-201ENST00000399124 1418 ntBASIC20.18■□□□□ 0.82
MMP8P22894 TH-203ENST00000352909 1889 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
MMP8P22894 TSPAN4-204ENST00000397404 1462 ntAPPRIS P1 TSL 5 BASIC20.18■□□□□ 0.82
MMP8P22894 KMT5C-201ENST00000255613 2308 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
MMP8P22894 MBD3-207ENST00000590550 2782 ntTSL 2 BASIC20.17■□□□□ 0.82
MMP8P22894 CHRNA10-201ENST00000250699 1945 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
MMP8P22894 DNAL4-201ENST00000216068 1504 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
MMP8P22894 CIDEB-202ENST00000336557 2409 ntAPPRIS P1 TSL 2 BASIC20.17■□□□□ 0.82
MMP8P22894 GPRC5C-205ENST00000481232 1592 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
MMP8P22894 NR5A1-202ENST00000373588 3104 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
MMP8P22894 MOXD1-203ENST00000392401 2191 ntTSL 4 BASIC20.17■□□□□ 0.82
MMP8P22894 CD82-201ENST00000227155 2289 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
MMP8P22894 BIK-201ENST00000216115 953 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
MMP8P22894 TMEM223-201ENST00000307366 1288 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
MMP8P22894 MTHFD1L-201ENST00000367307 1049 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
MMP8P22894 CERNA3-201ENST00000521403 557 ntTSL 3 BASIC20.17■□□□□ 0.82
MMP8P22894 AMN1-211ENST00000541931 880 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
MMP8P22894 EFTUD1P1-201ENST00000558187 596 ntTSL 4 BASIC20.17■□□□□ 0.82
MMP8P22894 AC015712.2-203ENST00000560461 688 ntTSL 3 BASIC20.17■□□□□ 0.82
MMP8P22894 AC011445.1-201ENST00000601911 877 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
MMP8P22894 AL024498.1-202ENST00000606652 480 ntTSL 2 BASIC20.17■□□□□ 0.82
MMP8P22894 AC073195.1-201ENST00000607241 877 ntBASIC20.17■□□□□ 0.82
MMP8P22894 TARDBP-228ENST00000629725 1031 ntTSL 5 BASIC20.17■□□□□ 0.82
MMP8P22894 TRA2A-201ENST00000297071 1845 ntAPPRIS P3 TSL 1 (best) BASIC20.17■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 29.1 ms