Protein–RNA interactions for Protein: P22362

CCL1, C-C motif chemokine 1, humanhuman

Predictions only

Length 96 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL1P22362 ZNF529-AS1-202ENST00000475219 1033 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
CCL1P22362 AC090192.1-201ENST00000517740 490 ntBASIC16.53■□□□□ 0.24
CCL1P22362 AC092666.2-201ENST00000613287 246 ntBASIC16.53■□□□□ 0.24
CCL1P22362 CITED2-201ENST00000367651 2354 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
CCL1P22362 RHOT1-202ENST00000354266 2919 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
CCL1P22362 OTUD1-201ENST00000376495 2933 ntAPPRIS P1 BASIC16.53■□□□□ 0.24
CCL1P22362 CPSF3-201ENST00000238112 2345 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
CCL1P22362 SIGLEC10-204ENST00000436984 1776 ntTSL 2 BASIC16.53■□□□□ 0.24
CCL1P22362 TBC1D9-201ENST00000442267 5306 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
CCL1P22362 ENOPH1-201ENST00000273920 2025 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
CCL1P22362 TSC22D4-202ENST00000393991 1469 ntTSL 2 BASIC16.53■□□□□ 0.24
CCL1P22362 PPFIA1-201ENST00000253925 5234 ntAPPRIS P4 TSL 1 (best) BASIC16.53■□□□□ 0.24
CCL1P22362 NTRK1-201ENST00000358660 2492 ntAPPRIS ALT2 TSL 2 BASIC16.53■□□□□ 0.24
CCL1P22362 RAI14-201ENST00000265109 5092 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
CCL1P22362 ADORA2A-214ENST00000611543 2412 ntAPPRIS P1 TSL 5 BASIC16.53■□□□□ 0.24
CCL1P22362 PDE6B-202ENST00000429163 2120 ntTSL 2 BASIC16.52■□□□□ 0.24
CCL1P22362 C6orf223-202ENST00000439969 2757 ntTSL 2 BASIC16.52■□□□□ 0.24
CCL1P22362 CEACAM3-202ENST00000357396 1316 ntAPPRIS P3 TSL 1 (best) BASIC16.52■□□□□ 0.24
CCL1P22362 PLEKHB2-204ENST00000409158 2277 ntTSL 2 BASIC16.52■□□□□ 0.24
CCL1P22362 CIRBP-215ENST00000588030 1509 ntAPPRIS P3 TSL 5 BASIC16.52■□□□□ 0.24
CCL1P22362 CASC2-205ENST00000454781 2216 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
CCL1P22362 FOXI1-201ENST00000306268 1990 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
CCL1P22362 MPZ-206ENST00000533357 1955 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
CCL1P22362 MEA1-201ENST00000244711 1089 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
CCL1P22362 AIDA-202ENST00000355727 1072 ntTSL 5 BASIC16.52■□□□□ 0.24
CCL1P22362 NXNL2-201ENST00000375854 805 ntAPPRIS P1 TSL 5 BASIC16.52■□□□□ 0.24
CCL1P22362 GAS7-202ENST00000396115 929 ntTSL 5 BASIC16.52■□□□□ 0.24
CCL1P22362 IDH1-AS1-202ENST00000448588 489 ntTSL 3 BASIC16.52■□□□□ 0.24
CCL1P22362 LINC01881-205ENST00000456398 1235 ntTSL 5 BASIC16.52■□□□□ 0.24
CCL1P22362 BAALC-AS1-206ENST00000521383 736 ntTSL 3 BASIC16.52■□□□□ 0.24
CCL1P22362 CMTM3-207ENST00000564060 824 ntTSL 2 BASIC16.52■□□□□ 0.24
CCL1P22362 CMTM3-211ENST00000565922 615 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
CCL1P22362 ANAPC11-219ENST00000583839 499 ntAPPRIS P1 TSL 2 BASIC16.52■□□□□ 0.24
CCL1P22362 FXYD3-214ENST00000605677 633 ntTSL 2 BASIC16.52■□□□□ 0.24
CCL1P22362 AC004264.1-201ENST00000608354 794 ntBASIC16.52■□□□□ 0.24
CCL1P22362 IL15RA-222ENST00000622442 1160 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.24
CCL1P22362 TSR1-201ENST00000301364 5188 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
CCL1P22362 PRELID3A-201ENST00000336990 1715 ntAPPRIS P1 TSL 2 BASIC16.52■□□□□ 0.24
CCL1P22362 SH3BP1-201ENST00000357436 2852 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
CCL1P22362 PRELID3A-202ENST00000440960 1716 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
CCL1P22362 MTDH-203ENST00000519934 2184 ntTSL 5 BASIC16.52■□□□□ 0.24
CCL1P22362 SLC35B2-205ENST00000538577 1909 ntTSL 2 BASIC16.52■□□□□ 0.23
CCL1P22362 SHISA5-220ENST00000619810 2385 ntTSL 2 BASIC16.52■□□□□ 0.23
CCL1P22362 CECR2-202ENST00000342247 6178 ntAPPRIS ALT2 TSL 5 BASIC16.52■□□□□ 0.23
CCL1P22362 TMEM230-206ENST00000379283 1660 ntAPPRIS P1 TSL 3 BASIC16.52■□□□□ 0.23
CCL1P22362 CDC42BPB-201ENST00000361246 6758 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
CCL1P22362 PLA2G7-201ENST00000274793 1882 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
CCL1P22362 DMD-208ENST00000378680 1858 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
CCL1P22362 BTNL9-210ENST00000515271 1444 ntTSL 2 BASIC16.52■□□□□ 0.23
CCL1P22362 NR2F1-205ENST00000615873 1427 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
CCL1P22362 ZNF598-204ENST00000563630 3371 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
CCL1P22362 SLC22A17-204ENST00000397267 2455 ntAPPRIS P4 TSL 5 BASIC16.52■□□□□ 0.23
CCL1P22362 OCSTAMP-201ENST00000279028 2043 ntAPPRIS P1 TSL 5 BASIC16.52■□□□□ 0.23
CCL1P22362 GCSH-201ENST00000315467 1597 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
CCL1P22362 EIF4E3-201ENST00000295612 2764 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
CCL1P22362 ACAA1-201ENST00000301810 1540 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
CCL1P22362 WBP2-213ENST00000590221 1745 ntAPPRIS ALT1 TSL 3 BASIC16.51■□□□□ 0.23
CCL1P22362 FBXL18-203ENST00000453700 1932 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
CCL1P22362 RELA-202ENST00000406246 2700 ntAPPRIS P3 TSL 1 (best) BASIC16.51■□□□□ 0.23
CCL1P22362 GRK6-201ENST00000355472 2939 ntAPPRIS P3 TSL 1 (best) BASIC16.51■□□□□ 0.23
CCL1P22362 GAS2L1-210ENST00000621062 2483 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
CCL1P22362 NUP50-AS1-201ENST00000426282 2076 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
CCL1P22362 PRSS33-201ENST00000293851 1694 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
CCL1P22362 AC010173.1-201ENST00000549023 1453 ntTSL 2 BASIC16.51■□□□□ 0.23
CCL1P22362 COQ10B-203ENST00000409398 879 ntTSL 3 BASIC16.51■□□□□ 0.23
CCL1P22362 LINC00708-201ENST00000428165 916 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
CCL1P22362 TSPY23P-201ENST00000440136 739 ntBASIC16.51■□□□□ 0.23
CCL1P22362 AP003097.1-201ENST00000530657 1135 ntBASIC16.51■□□□□ 0.23
CCL1P22362 AC022211.2-202ENST00000582668 546 ntTSL 4 BASIC16.51■□□□□ 0.23
CCL1P22362 MTDHP1-201ENST00000605323 784 ntBASIC16.51■□□□□ 0.23
CCL1P22362 MAGIX-206ENST00000615626 1057 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
CCL1P22362 AC013268.1-201ENST00000639717 1208 ntTSL 5 BASIC16.51■□□□□ 0.23
CCL1P22362 GRB10-205ENST00000401949 2627 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
CCL1P22362 TMEM79-203ENST00000405535 2201 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
CCL1P22362 GOLGA6L5P-202ENST00000515341 1828 ntBASIC16.51■□□□□ 0.23
CCL1P22362 NDRG2-227ENST00000554143 1980 ntAPPRIS ALT1 TSL 2 BASIC16.51■□□□□ 0.23
CCL1P22362 ZFC3H1-206ENST00000548100 1771 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
CCL1P22362 ZBTB8A-201ENST00000316459 1943 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
CCL1P22362 TSGA10IP-203ENST00000532620 1925 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
CCL1P22362 NUMBL-202ENST00000540131 1931 ntAPPRIS ALT2 TSL 2 BASIC16.51■□□□□ 0.23
CCL1P22362 GBGT1-208ENST00000540636 1934 ntTSL 2 BASIC16.51■□□□□ 0.23
CCL1P22362 FADS2-209ENST00000521849 1703 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
CCL1P22362 TMEM109-201ENST00000227525 2413 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
CCL1P22362 PRODH-215ENST00000610940 2405 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
CCL1P22362 KRT8-217ENST00000619952 2437 ntTSL 2 BASIC16.5■□□□□ 0.23
CCL1P22362 AGPAT5-201ENST00000285518 3685 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
CCL1P22362 DDX31-206ENST00000480876 1333 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
CCL1P22362 CDKN2B-AS1-217ENST00000585267 1337 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
CCL1P22362 ATP6V0B-213ENST00000532642 1685 ntTSL 2 BASIC16.5■□□□□ 0.23
CCL1P22362 AC026412.3-201ENST00000605200 1661 ntTSL 5 BASIC16.5■□□□□ 0.23
CCL1P22362 SLC6A9-201ENST00000357730 2168 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
CCL1P22362 KCNH1-210ENST00000640044 1818 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
CCL1P22362 TEKT5-201ENST00000283025 1612 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
CCL1P22362 C10orf91-201ENST00000321248 1257 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
CCL1P22362 PTPMT1-202ENST00000326674 768 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
CCL1P22362 EP300-AS1-201ENST00000420537 457 ntTSL 3 BASIC16.5■□□□□ 0.23
CCL1P22362 Z98884.1-201ENST00000451646 830 ntTSL 3 BASIC16.5■□□□□ 0.23
CCL1P22362 AC226101.2-201ENST00000458252 747 ntTSL 2 BASIC16.5■□□□□ 0.23
CCL1P22362 MIXL1-202ENST00000542034 839 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
CCL1P22362 GNAO1-211ENST00000570235 568 ntTSL 2 BASIC16.5■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 18.9 ms