Protein–RNA interactions for Protein: P14651

HOXB3, Homeobox protein Hox-B3, humanhuman

Predicted RBP Predictions only

Length 431 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXB3P14651 YDJC-201ENST00000292778 1351 ntAPPRIS P1 TSL 2 BASIC18.81■□□□□ 0.6
HOXB3P14651 ZNF326-202ENST00000361911 1538 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
HOXB3P14651 HSPD1-202ENST00000388968 2455 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
HOXB3P14651 SOX21-201ENST00000376945 2778 ntAPPRIS P1 BASIC18.8■□□□□ 0.6
HOXB3P14651 EPS8L1-203ENST00000540810 2360 ntTSL 2 BASIC18.8■□□□□ 0.6
HOXB3P14651 AC073343.2-203ENST00000366167 564 ntTSL 4 BASIC18.8■□□□□ 0.6
HOXB3P14651 MRPL43-205ENST00000370234 798 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
HOXB3P14651 PRR31-201ENST00000371629 978 ntTSL 2 BASIC18.8■□□□□ 0.6
HOXB3P14651 TAPBP-236ENST00000456592 817 ntTSL 5 BASIC18.8■□□□□ 0.6
HOXB3P14651 AC135586.2-201ENST00000537262 567 ntAPPRIS P1 TSL 4 BASIC18.8■□□□□ 0.6
HOXB3P14651 CYB561-214ENST00000582034 1193 ntTSL 2 BASIC18.8■□□□□ 0.6
HOXB3P14651 HLA-A-209ENST00000638375 975 ntBASIC18.8■□□□□ 0.6
HOXB3P14651 TMEM179-206ENST00000616017 1645 ntBASIC18.8■□□□□ 0.6
HOXB3P14651 PLSCR3-212ENST00000576201 1965 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
HOXB3P14651 RAB34-204ENST00000395245 1766 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
HOXB3P14651 RASD1-201ENST00000225688 1746 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
HOXB3P14651 JAKMIP1-201ENST00000282924 2585 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
HOXB3P14651 CCM2-202ENST00000381112 1881 ntAPPRIS ALT2 TSL 2 BASIC18.8■□□□□ 0.6
HOXB3P14651 HS3ST4-201ENST00000331351 3203 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
HOXB3P14651 HOXD11-201ENST00000249504 1533 ntAPPRIS P1 TSL 3 BASIC18.79■□□□□ 0.6
HOXB3P14651 APTR-204ENST00000440088 2029 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
HOXB3P14651 NKX1-2-201ENST00000451024 3364 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
HOXB3P14651 PQLC2-202ENST00000375155 1805 ntAPPRIS P1 TSL 2 BASIC18.79■□□□□ 0.6
HOXB3P14651 FAM110A-204ENST00000381941 1809 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
HOXB3P14651 GABRD-201ENST00000378585 1961 ntAPPRIS P2 TSL 1 (best) BASIC18.79■□□□□ 0.6
HOXB3P14651 RTN4-207ENST00000402434 1456 ntTSL 5 BASIC18.79■□□□□ 0.6
HOXB3P14651 NEU4-201ENST00000325935 2288 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
HOXB3P14651 ADAD1-202ENST00000388724 1912 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
HOXB3P14651 EMC6-201ENST00000248378 653 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
HOXB3P14651 NDUFS6-201ENST00000274137 1082 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
HOXB3P14651 TMEM234-201ENST00000309777 1082 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
HOXB3P14651 AL731557.1-201ENST00000425264 744 ntTSL 3 BASIC18.79■□□□□ 0.6
HOXB3P14651 C1orf52-203ENST00000471115 1219 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
HOXB3P14651 DCTN5-208ENST00000568589 772 ntTSL 2 BASIC18.79■□□□□ 0.6
HOXB3P14651 PRR29-205ENST00000579184 1052 ntAPPRIS ALT2 TSL 2 BASIC18.79■□□□□ 0.6
HOXB3P14651 GRAMD4P8-201ENST00000605465 1115 ntBASIC18.79■□□□□ 0.6
HOXB3P14651 CLN6-221ENST00000637494 765 ntTSL 5 BASIC18.79■□□□□ 0.6
HOXB3P14651 TRAK2-202ENST00000430254 1436 ntTSL 2 BASIC18.79■□□□□ 0.6
HOXB3P14651 RBM14-RBM4-201ENST00000412278 1566 ntAPPRIS P1 TSL 2 BASIC18.79■□□□□ 0.6
HOXB3P14651 NPIPA8-201ENST00000525596 1565 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
HOXB3P14651 FBXO27-201ENST00000292853 2330 ntAPPRIS P2 TSL 1 (best) BASIC18.79■□□□□ 0.6
HOXB3P14651 TRIM74-201ENST00000285805 1350 ntAPPRIS P2 TSL 1 (best) BASIC18.79■□□□□ 0.6
HOXB3P14651 PRSS50-202ENST00000315170 1372 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
HOXB3P14651 TRIM73-201ENST00000323819 1358 ntAPPRIS P2 TSL 1 (best) BASIC18.79■□□□□ 0.6
HOXB3P14651 GPBAR1-202ENST00000519574 1382 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
HOXB3P14651 ST3GAL4-209ENST00000526727 1967 ntAPPRIS ALT1 TSL 1 (best) BASIC18.79■□□□□ 0.6
HOXB3P14651 ANKRD13D-216ENST00000514166 2138 ntTSL 2 BASIC18.79■□□□□ 0.6
HOXB3P14651 PGAP1-204ENST00000409475 2443 ntTSL 2 BASIC18.79■□□□□ 0.6
HOXB3P14651 TH-206ENST00000381178 1910 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
HOXB3P14651 CBR1-205ENST00000530908 1924 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
HOXB3P14651 NAT6-201ENST00000354862 1330 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
HOXB3P14651 GFI1-201ENST00000294702 2784 ntAPPRIS P1 TSL 2 BASIC18.78■□□□□ 0.6
HOXB3P14651 FAM57B-204ENST00000564806 1710 ntTSL 2 BASIC18.78■□□□□ 0.6
HOXB3P14651 PCDHA13-203ENST00000617769 2427 ntAPPRIS ALT2 BASIC18.78■□□□□ 0.6
HOXB3P14651 MTX1-201ENST00000316721 1441 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
HOXB3P14651 PWWP2AP1-201ENST00000429776 2273 ntBASIC18.78■□□□□ 0.6
HOXB3P14651 GML-201ENST00000220940 723 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
HOXB3P14651 PRICKLE4-202ENST00000394260 1035 ntAPPRIS ALT2 TSL 2 BASIC18.78■□□□□ 0.6
HOXB3P14651 PRICKLE4-203ENST00000394263 1155 ntAPPRIS P2 TSL 5 BASIC18.78■□□□□ 0.6
HOXB3P14651 CCDC124-201ENST00000445755 938 ntAPPRIS P1 TSL 2 BASIC18.78■□□□□ 0.6
HOXB3P14651 ASH1L-AS1-202ENST00000456633 911 ntTSL 2 BASIC18.78■□□□□ 0.6
HOXB3P14651 NTMT1-205ENST00000459968 1123 ntTSL 2 BASIC18.78■□□□□ 0.6
HOXB3P14651 AC008040.2-201ENST00000461049 708 ntBASIC18.78■□□□□ 0.6
HOXB3P14651 NTMT1-207ENST00000482347 1072 ntTSL 2 BASIC18.78■□□□□ 0.6
HOXB3P14651 TMEM185A-204ENST00000507237 903 ntTSL 2 BASIC18.78■□□□□ 0.6
HOXB3P14651 AC097488.1-201ENST00000507834 756 ntBASIC18.78■□□□□ 0.6
HOXB3P14651 IKBKB-210ENST00000518983 447 ntTSL 2 BASIC18.78■□□□□ 0.6
HOXB3P14651 ALKAL1-202ENST00000523939 536 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
HOXB3P14651 CD320-202ENST00000537716 1119 ntTSL 2 BASIC18.78■□□□□ 0.6
HOXB3P14651 CCDC124-203ENST00000597436 1055 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
HOXB3P14651 AC130371.2-201ENST00000619443 611 ntBASIC18.78■□□□□ 0.6
HOXB3P14651 FGF16-201ENST00000439435 1650 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
HOXB3P14651 PHLDA3-202ENST00000367311 2640 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
HOXB3P14651 KCNH2-201ENST00000262186 4286 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
HOXB3P14651 CSNK1D-203ENST00000392334 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC18.78■□□□□ 0.6
HOXB3P14651 C19orf25-202ENST00000436106 2403 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
HOXB3P14651 IL17RE-206ENST00000454190 2757 ntTSL 2 BASIC18.77■□□□□ 0.6
HOXB3P14651 AGAP4-207ENST00000616763 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
HOXB3P14651 PSMD8-201ENST00000215071 1553 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
HOXB3P14651 POLD2-201ENST00000223361 1597 ntTSL 5 BASIC18.77■□□□□ 0.6
HOXB3P14651 C3orf18-203ENST00000426034 2486 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
HOXB3P14651 FAM212B-203ENST00000444059 1423 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
HOXB3P14651 PNKP-207ENST00000596014 1665 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
HOXB3P14651 BCAP29-202ENST00000379117 1946 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.6
HOXB3P14651 ST3GAL3-219ENST00000372374 2170 ntTSL 5 BASIC18.77■□□□□ 0.6
HOXB3P14651 GNAI1-201ENST00000351004 3347 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
HOXB3P14651 FAM182B-202ENST00000376404 456 ntAPPRIS ALT2 BASIC18.77■□□□□ 0.6
HOXB3P14651 AC021188.1-201ENST00000421534 740 ntTSL 3 BASIC18.77■□□□□ 0.6
HOXB3P14651 FDX2-206ENST00000492239 773 ntTSL 2 BASIC18.77■□□□□ 0.6
HOXB3P14651 AMN1-211ENST00000541931 880 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
HOXB3P14651 SLC39A2-203ENST00000554422 1259 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
HOXB3P14651 CDIPT-204ENST00000563415 1047 ntTSL 3 BASIC18.77■□□□□ 0.6
HOXB3P14651 IMMP2L-202ENST00000405709 1522 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
HOXB3P14651 AL158211.5-201ENST00000623583 2518 ntBASIC18.77■□□□□ 0.6
HOXB3P14651 NCF1-201ENST00000289473 1396 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
HOXB3P14651 DUT-201ENST00000331200 2147 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
HOXB3P14651 ARHGEF4-202ENST00000355771 1872 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
HOXB3P14651 IER3-202ENST00000376377 1350 ntBASIC18.77■□□□□ 0.6
HOXB3P14651 IL17RC-203ENST00000403601 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
HOXB3P14651 DGKZ-203ENST00000421244 2862 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 22.4 ms