Protein–RNA interactions for Protein: P13994

CCDC130, Coiled-coil domain-containing protein 130, humanhuman

Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC130P13994 KRT8P12-201ENST00000468527 998 ntTSL 2 BASIC20.34■□□□□ 0.85
CCDC130P13994 AC008771.1-201ENST00000508000 1151 ntTSL 2 BASIC20.34■□□□□ 0.85
CCDC130P13994 ANKRD54-211ENST00000609454 825 ntTSL 3 BASIC20.34■□□□□ 0.85
CCDC130P13994 SPINK2-206ENST00000618802 608 ntTSL 3 BASIC20.34■□□□□ 0.85
CCDC130P13994 MELTF-202ENST00000296351 1650 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
CCDC130P13994 SUMF2-202ENST00000342190 1876 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
CCDC130P13994 SEC11C-202ENST00000509791 2054 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
CCDC130P13994 SBDS-201ENST00000246868 1631 ntAPPRIS P2 TSL 1 (best) BASIC20.34■□□□□ 0.85
CCDC130P13994 CFAP46-201ENST00000368585 1825 ntAPPRIS ALT2 TSL 2 BASIC20.34■□□□□ 0.85
CCDC130P13994 HOXC13-201ENST00000243056 2423 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
CCDC130P13994 YTHDF3-213ENST00000621820 2363 ntTSL 2 BASIC20.34■□□□□ 0.85
CCDC130P13994 CYP46A1-202ENST00000380228 1597 ntTSL 2 BASIC20.34■□□□□ 0.85
CCDC130P13994 OTOP2-201ENST00000331427 2147 ntAPPRIS P1 TSL 5 BASIC20.33■□□□□ 0.85
CCDC130P13994 ALDOA-212ENST00000564546 2104 ntAPPRIS P2 TSL 1 (best) BASIC20.33■□□□□ 0.85
CCDC130P13994 SLC25A3-201ENST00000188376 1909 ntAPPRIS ALT1 TSL 1 (best) BASIC20.33■□□□□ 0.85
CCDC130P13994 RCCD1-201ENST00000394258 2689 ntAPPRIS P2 TSL 1 (best) BASIC20.33■□□□□ 0.85
CCDC130P13994 PCID2-202ENST00000337344 1898 ntAPPRIS P1 TSL 2 BASIC20.33■□□□□ 0.85
CCDC130P13994 THOP1-202ENST00000395212 1877 ntTSL 2 BASIC20.33■□□□□ 0.85
CCDC130P13994 IQCJ-SCHIP1-204ENST00000485419 2445 ntAPPRIS ALT2 TSL 2 BASIC20.33■□□□□ 0.85
CCDC130P13994 OGG1-201ENST00000302003 1655 ntAPPRIS P4 TSL 1 (best) BASIC20.33■□□□□ 0.85
CCDC130P13994 MMP23A-201ENST00000234610 1017 ntBASIC20.33■□□□□ 0.85
CCDC130P13994 NDUFS6-201ENST00000274137 1082 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
CCDC130P13994 DUSP23-203ENST00000368109 729 ntAPPRIS P1 TSL 2 BASIC20.33■□□□□ 0.85
CCDC130P13994 PRR31-201ENST00000371629 978 ntTSL 2 BASIC20.33■□□□□ 0.85
CCDC130P13994 RABL2A-202ENST00000393165 1118 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.85
CCDC130P13994 TARBP2-220ENST00000552857 916 ntTSL 5 BASIC20.33■□□□□ 0.85
CCDC130P13994 FITM1-202ENST00000559294 800 ntBASIC20.33■□□□□ 0.85
CCDC130P13994 YPEL3-207ENST00000566134 761 ntTSL 5 BASIC20.33■□□□□ 0.85
CCDC130P13994 ATG4B-226ENST00000625810 370 ntTSL 4 BASIC20.33■□□□□ 0.85
CCDC130P13994 LRPPRC-202ENST00000409659 1610 ntTSL 5 BASIC20.33■□□□□ 0.84
CCDC130P13994 KRT8P11-201ENST00000409686 1436 ntBASIC20.33■□□□□ 0.84
CCDC130P13994 EIF2B1-201ENST00000424014 2477 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
CCDC130P13994 HOXA11-AS-205ENST00000522863 1723 ntTSL 5 BASIC20.33■□□□□ 0.84
CCDC130P13994 APIP-201ENST00000395787 1366 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
CCDC130P13994 IGFBP7-AS1-201ENST00000499667 1389 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
CCDC130P13994 BCR-202ENST00000359540 4708 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
CCDC130P13994 MON1A-202ENST00000417270 2527 ntAPPRIS ALT2 TSL 5 BASIC20.32■□□□□ 0.84
CCDC130P13994 HSD11B1L-221ENST00000583928 1319 ntTSL 5 BASIC20.32■□□□□ 0.84
CCDC130P13994 AC087482.1-204ENST00000636067 2431 ntTSL 5 BASIC20.32■□□□□ 0.84
CCDC130P13994 KRAS-201ENST00000256078 1119 ntAPPRIS P4 TSL 1 (best) BASIC20.32■□□□□ 0.84
CCDC130P13994 WNT1-201ENST00000293549 1185 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
CCDC130P13994 COX5A-201ENST00000322347 1268 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
CCDC130P13994 MDK-201ENST00000359803 985 ntAPPRIS P2 TSL 2 BASIC20.32■□□□□ 0.84
CCDC130P13994 TLCD1-202ENST00000394933 784 ntTSL 2 BASIC20.32■□□□□ 0.84
CCDC130P13994 AC005056.1-201ENST00000435932 532 ntTSL 4 BASIC20.32■□□□□ 0.84
CCDC130P13994 MFAP1P1-201ENST00000442257 1255 ntBASIC20.32■□□□□ 0.84
CCDC130P13994 MNX1-AS1-201ENST00000480284 1041 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
CCDC130P13994 RPS20-210ENST00000523936 899 ntTSL 2 BASIC20.32■□□□□ 0.84
CCDC130P13994 TESMIN-209ENST00000544963 1235 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
CCDC130P13994 ARL16-209ENST00000573715 763 ntTSL 3 BASIC20.32■□□□□ 0.84
CCDC130P13994 ARL16-211ENST00000576135 694 ntTSL 3 BASIC20.32■□□□□ 0.84
CCDC130P13994 AC100793.2-201ENST00000593139 542 ntTSL 5 BASIC20.32■□□□□ 0.84
CCDC130P13994 OAZ1-211ENST00000602676 1148 ntAPPRIS P3 TSL 5 BASIC20.32■□□□□ 0.84
CCDC130P13994 HGFAC-204ENST00000511533 2016 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
CCDC130P13994 TPSB2-203ENST00000612142 1352 ntAPPRIS P5 TSL 1 (best) BASIC20.32■□□□□ 0.84
CCDC130P13994 HOXC4-201ENST00000303406 1524 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
CCDC130P13994 PSMD8-210ENST00000620216 1538 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
CCDC130P13994 MYEOV-202ENST00000441339 1996 ntAPPRIS P3 TSL 2 BASIC20.32■□□□□ 0.84
CCDC130P13994 SLC34A3-201ENST00000361134 2124 ntAPPRIS P1 TSL 2 BASIC20.32■□□□□ 0.84
CCDC130P13994 AC116562.4-201ENST00000641316 2276 ntBASIC20.32■□□□□ 0.84
CCDC130P13994 ANKRD16-203ENST00000380094 2738 ntAPPRIS P1 TSL 2 BASIC20.32■□□□□ 0.84
CCDC130P13994 NECAB3-202ENST00000375238 1942 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
CCDC130P13994 CYP2E1-205ENST00000463117 1912 ntAPPRIS P1 TSL 5 BASIC20.31■□□□□ 0.84
CCDC130P13994 KREMEN2-206ENST00000575885 1798 ntTSL 2 BASIC20.31■□□□□ 0.84
CCDC130P13994 IL6R-208ENST00000622330 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
CCDC130P13994 GAS2L1-208ENST00000616432 2925 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
CCDC130P13994 CDC42EP1-201ENST00000249014 2181 ntAPPRIS P2 TSL 1 (best) BASIC20.31■□□□□ 0.84
CCDC130P13994 KTI12-201ENST00000371614 1714 ntAPPRIS P1 BASIC20.31■□□□□ 0.84
CCDC130P13994 CXXC4-201ENST00000394767 5565 ntAPPRIS P1 TSL 5 BASIC20.31■□□□□ 0.84
CCDC130P13994 NUBP2-201ENST00000262302 1413 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
CCDC130P13994 HOXD12-201ENST00000404162 841 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
CCDC130P13994 CACYBP-202ENST00000405362 1059 ntTSL 5 BASIC20.31■□□□□ 0.84
CCDC130P13994 ACP1-205ENST00000407983 703 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
CCDC130P13994 TSPY23P-201ENST00000440136 739 ntBASIC20.31■□□□□ 0.84
CCDC130P13994 ROPN1L-202ENST00000503804 1291 ntAPPRIS P1 TSL 2 BASIC20.31■□□□□ 0.84
CCDC130P13994 ZNF667-AS1-208ENST00000594783 475 ntTSL 3 BASIC20.31■□□□□ 0.84
CCDC130P13994 GRAMD4P8-201ENST00000605465 1115 ntBASIC20.31■□□□□ 0.84
CCDC130P13994 UHRF1-203ENST00000615884 2651 ntAPPRIS P1 TSL 2 BASIC20.31■□□□□ 0.84
CCDC130P13994 NETO1-207ENST00000583169 2357 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
CCDC130P13994 KCNK4-202ENST00000422670 1697 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
CCDC130P13994 TEX21P-204ENST00000641479 1693 ntBASIC20.31■□□□□ 0.84
CCDC130P13994 MPZL1-201ENST00000359523 5010 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
CCDC130P13994 FBXL19-207ENST00000565690 2570 ntAPPRIS ALT2 TSL 5 BASIC20.31■□□□□ 0.84
CCDC130P13994 CYP2D8P-201ENST00000433633 1490 ntBASIC20.3■□□□□ 0.84
CCDC130P13994 GOSR2-210ENST00000576910 1891 ntAPPRIS ALT1 TSL 5 BASIC20.3■□□□□ 0.84
CCDC130P13994 LARGE2-208ENST00000531526 2528 ntAPPRIS P3 TSL 2 BASIC20.3■□□□□ 0.84
CCDC130P13994 GPRC5C-205ENST00000481232 1592 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
CCDC130P13994 DUT-202ENST00000455976 1935 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
CCDC130P13994 AL032819.2-201ENST00000624543 2162 ntBASIC20.3■□□□□ 0.84
CCDC130P13994 SOX4-201ENST00000244745 5852 ntAPPRIS P1 BASIC20.3■□□□□ 0.84
CCDC130P13994 VCY1B-201ENST00000250823 550 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
CCDC130P13994 VCY-201ENST00000250825 550 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
CCDC130P13994 MPC2-201ENST00000271373 798 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
CCDC130P13994 AC073343.2-203ENST00000366167 564 ntTSL 4 BASIC20.3■□□□□ 0.84
CCDC130P13994 POLR2D-202ENST00000409698 806 ntTSL 2 BASIC20.3■□□□□ 0.84
CCDC130P13994 YKT6-207ENST00000496112 1270 ntTSL 2 BASIC20.3■□□□□ 0.84
CCDC130P13994 AC091153.3-201ENST00000497885 472 ntTSL 2 BASIC20.3■□□□□ 0.84
CCDC130P13994 AP005242.2-201ENST00000580065 1175 ntBASIC20.3■□□□□ 0.84
CCDC130P13994 RASSF1-202ENST00000357043 1864 ntAPPRIS P3 TSL 1 (best) BASIC20.3■□□□□ 0.84
CCDC130P13994 TDRP-203ENST00000523656 2622 ntTSL 5 BASIC20.3■□□□□ 0.84
Retrieved 100 of 98,524 protein–RNA pairs in 32.2 ms