Protein–RNA interactions for Protein: P12107

COL11A1, Collagen alpha-1(XI) chain, humanhuman

Predicted RBP Predictions only

Length 1,806 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A1P12107 AP1S2-206ENST00000545766 576 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
COL11A1P12107 KLK7-206ENST00000597707 1054 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
COL11A1P12107 TRPV6-209ENST00000638686 2298 ntAPPRIS P2 TSL 1 (best) BASIC21.86■■□□□ 1.09
COL11A1P12107 IER3-202ENST00000376377 1350 ntBASIC21.86■■□□□ 1.09
COL11A1P12107 ICA1-208ENST00000407906 1615 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
COL11A1P12107 HMOX2-218ENST00000619913 1908 ntAPPRIS P1 TSL 5 BASIC21.85■■□□□ 1.09
COL11A1P12107 AC115618.1-201ENST00000376775 549 ntTSL 3 BASIC21.85■■□□□ 1.09
COL11A1P12107 FXN-203ENST00000396366 922 ntTSL 2 BASIC21.85■■□□□ 1.09
COL11A1P12107 LCN10-205ENST00000497771 723 ntAPPRIS P2 TSL 1 (best) BASIC21.85■■□□□ 1.09
COL11A1P12107 P2RX2-208ENST00000542301 1881 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
COL11A1P12107 AC079385.1-202ENST00000549203 569 ntTSL 4 BASIC21.85■■□□□ 1.09
COL11A1P12107 METRN-205ENST00000568415 612 ntAPPRIS ALT2 TSL 3 BASIC21.85■■□□□ 1.09
COL11A1P12107 AC004076.1-201ENST00000596831 664 ntAPPRIS P1 TSL 2 BASIC21.85■■□□□ 1.09
COL11A1P12107 mascRNA-menRNA.2-201ENST00000616984 58 ntBASIC21.85■■□□□ 1.09
COL11A1P12107 TREX2-203ENST00000338525 2116 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
COL11A1P12107 EMD-202ENST00000369842 1379 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
COL11A1P12107 UPF3A-202ENST00000375299 2387 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
COL11A1P12107 SENP5-204ENST00000445299 2491 ntTSL 2 BASIC21.85■■□□□ 1.09
COL11A1P12107 MAP7-206ENST00000611373 2317 ntAPPRIS ALT2 TSL 5 BASIC21.85■■□□□ 1.09
COL11A1P12107 RDH13-203ENST00000415061 1871 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
COL11A1P12107 LMNB1-202ENST00000395354 1572 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
COL11A1P12107 FAM187B-201ENST00000324675 1184 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
COL11A1P12107 TNFSF13-208ENST00000483039 959 ntTSL 2 BASIC21.85■■□□□ 1.09
COL11A1P12107 KRT18P56-201ENST00000507275 550 ntBASIC21.85■■□□□ 1.09
COL11A1P12107 CHRNB1-207ENST00000575379 1095 ntTSL 2 BASIC21.85■■□□□ 1.09
COL11A1P12107 NUDT16L1-203ENST00000586252 922 ntTSL 3 BASIC21.85■■□□□ 1.09
COL11A1P12107 LINC00910-203ENST00000587874 544 ntTSL 4 BASIC21.85■■□□□ 1.09
COL11A1P12107 DHRS2-210ENST00000611765 1287 ntAPPRIS ALT2 TSL 2 BASIC21.85■■□□□ 1.09
COL11A1P12107 PLPP4-202ENST00000398250 1521 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
COL11A1P12107 NFE2L1-204ENST00000536222 2172 ntTSL 2 BASIC21.85■■□□□ 1.09
COL11A1P12107 OTOP2-201ENST00000331427 2147 ntAPPRIS P1 TSL 5 BASIC21.84■■□□□ 1.09
COL11A1P12107 EPHA6-202ENST00000470610 2058 ntTSL 2 BASIC21.84■■□□□ 1.09
COL11A1P12107 SCLY-201ENST00000254663 2562 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
COL11A1P12107 TCP11-202ENST00000311875 2166 ntAPPRIS ALT2 TSL 1 (best) BASIC21.84■■□□□ 1.09
COL11A1P12107 AC125437.2-201ENST00000625180 2167 ntBASIC21.84■■□□□ 1.09
COL11A1P12107 RPL26L1-205ENST00000519974 695 ntAPPRIS P1 TSL 3 BASIC21.84■■□□□ 1.09
COL11A1P12107 MARK4-211ENST00000622871 1147 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
COL11A1P12107 DNAJB6-218ENST00000634080 1005 ntTSL 2 BASIC21.84■■□□□ 1.09
COL11A1P12107 CLN6-214ENST00000636314 442 ntTSL 3 BASIC21.84■■□□□ 1.09
COL11A1P12107 SUMF2-201ENST00000275607 1894 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
COL11A1P12107 CRYBB2P1-202ENST00000382734 1364 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
COL11A1P12107 DISC1-213ENST00000537876 2349 ntAPPRIS ALT2 TSL 2 BASIC21.84■■□□□ 1.09
COL11A1P12107 NR1H2-202ENST00000411902 1466 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
COL11A1P12107 C18orf21-205ENST00000592875 1581 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
COL11A1P12107 WFIKKN1-201ENST00000319070 2028 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
COL11A1P12107 HIKESHI-207ENST00000533986 1694 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
COL11A1P12107 ZFC3H1-206ENST00000548100 1771 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
COL11A1P12107 GOSR2-210ENST00000576910 1891 ntAPPRIS ALT1 TSL 5 BASIC21.83■■□□□ 1.09
COL11A1P12107 CIZ1-204ENST00000372938 2984 ntAPPRIS P3 TSL 1 (best) BASIC21.83■■□□□ 1.09
COL11A1P12107 IGLL1-201ENST00000249053 716 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
COL11A1P12107 PTMS-201ENST00000309083 1139 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
COL11A1P12107 TRIM73-203ENST00000437796 1169 ntAPPRIS P2 TSL 1 (best) BASIC21.83■■□□□ 1.09
COL11A1P12107 FIS1-207ENST00000474120 915 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
COL11A1P12107 YIPF2-209ENST00000590329 958 ntTSL 5 BASIC21.83■■□□□ 1.09
COL11A1P12107 AC016582.2-201ENST00000591908 446 ntTSL 3 BASIC21.83■■□□□ 1.09
COL11A1P12107 NPNT-214ENST00000514622 2362 ntTSL 2 BASIC21.83■■□□□ 1.09
COL11A1P12107 IKBKG-207ENST00000611071 2103 ntAPPRIS P3 TSL 1 (best) BASIC21.83■■□□□ 1.09
COL11A1P12107 ACTL6A-201ENST00000392662 1899 ntTSL 2 BASIC21.83■■□□□ 1.09
COL11A1P12107 GRINA-201ENST00000313269 1968 ntAPPRIS P1 TSL 5 BASIC21.83■■□□□ 1.09
COL11A1P12107 GABRD-201ENST00000378585 1961 ntAPPRIS P2 TSL 1 (best) BASIC21.83■■□□□ 1.09
COL11A1P12107 RAB11FIP4-201ENST00000394744 1968 ntTSL 2 BASIC21.83■■□□□ 1.09
COL11A1P12107 TBC1D10A-204ENST00000403477 1950 ntAPPRIS ALT2 TSL 2 BASIC21.83■■□□□ 1.09
COL11A1P12107 ASCL5-202ENST00000458416 1420 ntAPPRIS P1 BASIC21.83■■□□□ 1.08
COL11A1P12107 DNAJB5-203ENST00000453597 2589 ntTSL 2 BASIC21.83■■□□□ 1.08
COL11A1P12107 PILRB-207ENST00000448382 2314 ntTSL 2 BASIC21.83■■□□□ 1.08
COL11A1P12107 SWI5-201ENST00000320188 980 ntAPPRIS P3 TSL 1 (best) BASIC21.83■■□□□ 1.08
COL11A1P12107 KRT18P48-201ENST00000434763 852 ntBASIC21.83■■□□□ 1.08
COL11A1P12107 AF186192.2-201ENST00000524514 423 ntTSL 3 BASIC21.83■■□□□ 1.08
COL11A1P12107 RAP1B-228ENST00000542145 1060 ntTSL 2 BASIC21.83■■□□□ 1.08
COL11A1P12107 ACOT2-204ENST00000613168 1553 ntAPPRIS P5 TSL 1 (best) BASIC21.82■■□□□ 1.08
COL11A1P12107 FARSA-207ENST00000588025 2057 ntTSL 5 BASIC21.82■■□□□ 1.08
COL11A1P12107 KLHDC1-201ENST00000359332 2691 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
COL11A1P12107 TSPAN14-202ENST00000341863 1037 ntTSL 5 BASIC21.82■■□□□ 1.08
COL11A1P12107 INSL3-202ENST00000379695 899 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
COL11A1P12107 NTRK3-206ENST00000540489 2145 ntTSL 5 BASIC21.82■■□□□ 1.08
COL11A1P12107 HMOX2-208ENST00000570646 2147 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
COL11A1P12107 VPS53-201ENST00000291074 2656 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
COL11A1P12107 MAP3K11-210ENST00000532507 1812 ntTSL 2 BASIC21.82■■□□□ 1.08
COL11A1P12107 CCDC106-201ENST00000308964 1546 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
COL11A1P12107 DMPK-203ENST00000354227 1982 ntTSL 2 BASIC21.82■■□□□ 1.08
COL11A1P12107 CDK5R2-201ENST00000302625 2508 ntAPPRIS P1 BASIC21.82■■□□□ 1.08
COL11A1P12107 NTMT1-211ENST00000617943 1346 ntTSL 3 BASIC21.82■■□□□ 1.08
COL11A1P12107 SNRPN-207ENST00000554227 1763 ntTSL 5 BASIC21.81■■□□□ 1.08
COL11A1P12107 PVRIG-201ENST00000317271 1583 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
COL11A1P12107 MAP7D2-203ENST00000443379 2476 ntAPPRIS ALT2 TSL 2 BASIC21.81■■□□□ 1.08
COL11A1P12107 NGEF-202ENST00000373552 2286 ntAPPRIS P1 TSL 2 BASIC21.81■■□□□ 1.08
COL11A1P12107 PWWP2AP1-201ENST00000429776 2273 ntBASIC21.81■■□□□ 1.08
COL11A1P12107 MALT1-201ENST00000345724 2866 ntAPPRIS ALT2 TSL 1 (best) BASIC21.81■■□□□ 1.08
COL11A1P12107 JADE2-204ENST00000402835 2797 ntTSL 5 BASIC21.81■■□□□ 1.08
COL11A1P12107 AC005091.1-201ENST00000441955 1190 ntTSL 3 BASIC21.81■■□□□ 1.08
COL11A1P12107 SEC1P-202ENST00000473944 940 ntBASIC21.81■■□□□ 1.08
COL11A1P12107 IFI27L1-206ENST00000554562 571 ntTSL 3 BASIC21.81■■□□□ 1.08
COL11A1P12107 AC138207.7-201ENST00000584499 668 ntTSL 5 BASIC21.81■■□□□ 1.08
COL11A1P12107 L34079.3-201ENST00000600242 546 ntTSL 4 BASIC21.81■■□□□ 1.08
COL11A1P12107 RAP1GDS1-201ENST00000264572 1686 ntTSL 5 BASIC21.81■■□□□ 1.08
COL11A1P12107 TEX21P-204ENST00000641479 1693 ntBASIC21.81■■□□□ 1.08
COL11A1P12107 MMAB-204ENST00000537236 1342 ntTSL 3 BASIC21.81■■□□□ 1.08
COL11A1P12107 PHKG2-202ENST00000424889 1566 ntTSL 2 BASIC21.81■■□□□ 1.08
COL11A1P12107 CERKL-205ENST00000409440 2425 ntTSL 2 BASIC21.81■■□□□ 1.08
COL11A1P12107 PHB2-203ENST00000535923 1515 ntAPPRIS P2 TSL 5 BASIC21.8■■□□□ 1.08
Retrieved 100 of 98,524 protein–RNA pairs in 19.2 ms