Protein–RNA interactions for Protein: P0CG48

UBC, Polyubiquitin-C, humanhuman

Known RBP Predictions only

Length 685 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBCP0CG48 PARL-206ENST00000435888 1098 ntTSL 5 BASIC16.82■□□□□ 0.28
UBCP0CG48 CROCCP5-201ENST00000436658 830 ntBASIC16.82■□□□□ 0.28
UBCP0CG48 HAGLR-207ENST00000452365 661 ntTSL 4 BASIC16.82■□□□□ 0.28
UBCP0CG48 AC091874.3-201ENST00000512672 1195 ntBASIC16.82■□□□□ 0.28
UBCP0CG48 AL929601.1-201ENST00000551565 573 ntTSL 4 BASIC16.82■□□□□ 0.28
UBCP0CG48 AL356020.1-201ENST00000554235 1076 ntTSL 5 BASIC16.82■□□□□ 0.28
UBCP0CG48 AC092143.2-201ENST00000554623 985 ntTSL 3 BASIC16.82■□□□□ 0.28
UBCP0CG48 CABIN1-202ENST00000337989 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
UBCP0CG48 LCORL-201ENST00000326877 5604 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
UBCP0CG48 C2orf81-201ENST00000290390 2227 ntAPPRIS P5 TSL 5 BASIC16.82■□□□□ 0.28
UBCP0CG48 PLEKHG2-202ENST00000409797 2205 ntAPPRIS ALT2 TSL 2 BASIC16.82■□□□□ 0.28
UBCP0CG48 FIP1L1-202ENST00000337488 2198 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
UBCP0CG48 MFHAS1-201ENST00000276282 6414 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
UBCP0CG48 BAIAP2-204ENST00000428708 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
UBCP0CG48 EVX1-202ENST00000496902 2955 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
UBCP0CG48 SMPD4-202ENST00000409031 4896 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
UBCP0CG48 SPNS1-204ENST00000352260 1948 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
UBCP0CG48 WAC-202ENST00000347934 2839 ntTSL 5 BASIC16.82■□□□□ 0.28
UBCP0CG48 TP53BP2-201ENST00000343537 4651 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
UBCP0CG48 STRN3-202ENST00000357479 2799 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
UBCP0CG48 USP48-204ENST00000400301 4309 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
UBCP0CG48 HAPLN4-201ENST00000291481 3449 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
UBCP0CG48 PDE1C-206ENST00000396193 5109 ntAPPRIS P4 TSL 2 BASIC16.82■□□□□ 0.28
UBCP0CG48 RNF114-201ENST00000244061 2503 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
UBCP0CG48 CEP78-201ENST00000277082 2542 ntAPPRIS ALT2 TSL 2 BASIC16.81■□□□□ 0.28
UBCP0CG48 HEBP2-204ENST00000607197 10014 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
UBCP0CG48 DAG1-219ENST00000538711 5582 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
UBCP0CG48 WWOX-202ENST00000402655 1594 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
UBCP0CG48 FAM72C-202ENST00000584486 2297 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
UBCP0CG48 CCDC17-202ENST00000421127 2216 ntAPPRIS ALT2 TSL 2 BASIC16.81■□□□□ 0.28
UBCP0CG48 CHST11-201ENST00000303694 5709 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
UBCP0CG48 AC007383.3-201ENST00000453039 1411 ntTSL 3 BASIC16.81■□□□□ 0.28
UBCP0CG48 MTAP-204ENST00000460874 1434 ntTSL 2 BASIC16.81■□□□□ 0.28
UBCP0CG48 PRR7-202ENST00000502922 1345 ntAPPRIS P1 TSL 2 BASIC16.81■□□□□ 0.28
UBCP0CG48 TIMM13-201ENST00000215570 1973 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
UBCP0CG48 CBY3-201ENST00000376974 785 ntAPPRIS P1 TSL 2 BASIC16.81■□□□□ 0.28
UBCP0CG48 SLC29A4P1-201ENST00000398760 971 ntBASIC16.81■□□□□ 0.28
UBCP0CG48 AC006970.2-201ENST00000450065 779 ntBASIC16.81■□□□□ 0.28
UBCP0CG48 ABHD17AP6-201ENST00000458502 1044 ntBASIC16.81■□□□□ 0.28
UBCP0CG48 AC016065.1-203ENST00000523225 1017 ntTSL 3 BASIC16.81■□□□□ 0.28
UBCP0CG48 C12orf75-205ENST00000549893 719 ntTSL 3 BASIC16.81■□□□□ 0.28
UBCP0CG48 AC105020.4-201ENST00000569467 563 ntTSL 4 BASIC16.81■□□□□ 0.28
UBCP0CG48 VPS53-216ENST00000574029 585 ntTSL 4 BASIC16.81■□□□□ 0.28
UBCP0CG48 KRT24-201ENST00000264651 1881 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
UBCP0CG48 PGAM1-201ENST00000334828 1830 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
UBCP0CG48 ANKMY1-209ENST00000405523 1827 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
UBCP0CG48 SPAG9-202ENST00000357122 4761 ntAPPRIS P2 TSL 1 (best) BASIC16.81■□□□□ 0.28
UBCP0CG48 MTMR1-208ENST00000445323 4516 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
UBCP0CG48 EPHX1-201ENST00000272167 1660 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
UBCP0CG48 SLC35F3-201ENST00000366617 2762 ntAPPRIS ALT1 TSL 1 (best) BASIC16.81■□□□□ 0.28
UBCP0CG48 TMEM8B-204ENST00000439587 2150 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
UBCP0CG48 TINAGL1-202ENST00000457433 2140 ntAPPRIS ALT2 TSL 2 BASIC16.81■□□□□ 0.28
UBCP0CG48 GPRC5C-205ENST00000481232 1592 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
UBCP0CG48 AC092368.3-202ENST00000574180 1591 ntBASIC16.81■□□□□ 0.28
UBCP0CG48 VWA8-AS1-201ENST00000611103 2079 ntTSL 2 BASIC16.81■□□□□ 0.28
UBCP0CG48 PDP1-208ENST00000520728 2554 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
UBCP0CG48 DOLPP1-203ENST00000406974 2037 ntTSL 2 BASIC16.8■□□□□ 0.28
UBCP0CG48 SDHAP1-207ENST00000440850 2000 ntBASIC16.8■□□□□ 0.28
UBCP0CG48 IL10RB-201ENST00000290200 1963 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
UBCP0CG48 OTUD1-201ENST00000376495 2933 ntAPPRIS P1 BASIC16.8■□□□□ 0.28
UBCP0CG48 WNK2-202ENST00000395477 6834 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
UBCP0CG48 FRRS1L-201ENST00000561981 8197 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
UBCP0CG48 UNC119-202ENST00000335765 1424 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
UBCP0CG48 MEN1-201ENST00000312049 2761 ntAPPRIS ALT1 TSL 1 (best) BASIC16.8■□□□□ 0.28
UBCP0CG48 PPP2R5A-201ENST00000261461 3128 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
UBCP0CG48 SLC1A7-201ENST00000371491 1306 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
UBCP0CG48 HEXDC-201ENST00000327949 1733 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
UBCP0CG48 SLC25A47-201ENST00000361529 1738 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
UBCP0CG48 ARL2-201ENST00000246747 979 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
UBCP0CG48 RRAS-201ENST00000246792 1044 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
UBCP0CG48 GLI3-203ENST00000437480 451 ntTSL 2 BASIC16.8■□□□□ 0.28
UBCP0CG48 AC009065.4-203ENST00000562838 535 ntTSL 2 BASIC16.8■□□□□ 0.28
UBCP0CG48 IKBKGP1-201ENST00000612193 1073 ntBASIC16.8■□□□□ 0.28
UBCP0CG48 PTMS-207ENST00000619580 1150 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
UBCP0CG48 HSD17B12-213ENST00000637401 866 ntTSL 4 BASIC16.8■□□□□ 0.28
UBCP0CG48 HLA-B-256ENST00000639848 1089 ntBASIC16.8■□□□□ 0.28
UBCP0CG48 DIAPH1-201ENST00000253811 5789 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
UBCP0CG48 DIAPH1-202ENST00000389054 5795 ntAPPRIS P4 TSL 5 BASIC16.8■□□□□ 0.28
UBCP0CG48 DIAPH1-204ENST00000398557 5789 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
UBCP0CG48 TM9SF1-206ENST00000528669 2425 ntTSL 5 BASIC16.8■□□□□ 0.28
UBCP0CG48 AMACR-206ENST00000502637 1598 ntTSL 5 BASIC16.8■□□□□ 0.28
UBCP0CG48 AGAP4-201ENST00000311652 2715 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
UBCP0CG48 CACNA1B-205ENST00000371363 9758 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
UBCP0CG48 COX20-203ENST00000411948 2631 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
UBCP0CG48 ESPN-205ENST00000461727 1869 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
UBCP0CG48 ZIC1-201ENST00000282928 5241 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
UBCP0CG48 DNAJC11-201ENST00000294401 2210 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
UBCP0CG48 EHMT1-203ENST00000460843 5137 ntAPPRIS P2 TSL 5 BASIC16.8■□□□□ 0.28
UBCP0CG48 DCHS2-201ENST00000339452 5064 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
UBCP0CG48 AKAP17A-201ENST00000313871 3204 ntAPPRIS P2 TSL 1 (best) BASIC16.79■□□□□ 0.28
UBCP0CG48 TMEM41B-207ENST00000611268 1440 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
UBCP0CG48 OTOP2-201ENST00000331427 2147 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
UBCP0CG48 TREX2-203ENST00000338525 2116 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
UBCP0CG48 UMOD-202ENST00000396134 2408 ntAPPRIS ALT2 TSL 2 BASIC16.79■□□□□ 0.28
UBCP0CG48 MCEMP1-201ENST00000333598 1730 ntAPPRIS P2 TSL 1 (best) BASIC16.79■□□□□ 0.28
UBCP0CG48 EFR3A-201ENST00000254624 5438 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
UBCP0CG48 SIGLEC14-201ENST00000360844 2035 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
UBCP0CG48 POLR1D-203ENST00000399697 2036 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
UBCP0CG48 LRCH3-207ENST00000441090 2034 ntTSL 2 BASIC16.79■□□□□ 0.28
UBCP0CG48 PRSS23-201ENST00000280258 4015 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 39.6 ms