Protein–RNA interactions for Protein: P07858

CTSB, Cathepsin B, humanhuman

Predictions only

Length 339 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTSBP07858 PRMT1-201ENST00000391851 1393 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
CTSBP07858 SPOCK3-215ENST00000510741 1963 ntAPPRIS ALT2 TSL 5 BASIC18.21■□□□□ 0.51
CTSBP07858 LGR4-201ENST00000379214 5206 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
CTSBP07858 SBDS-201ENST00000246868 1631 ntAPPRIS P2 TSL 1 (best) BASIC18.21■□□□□ 0.51
CTSBP07858 RFC2-213ENST00000621097 1635 ntTSL 5 BASIC18.21■□□□□ 0.51
CTSBP07858 CNOT9-209ENST00000627282 1621 ntTSL 2 BASIC18.21■□□□□ 0.51
CTSBP07858 GOSR2-210ENST00000576910 1891 ntAPPRIS ALT1 TSL 5 BASIC18.21■□□□□ 0.51
CTSBP07858 TMPOP1-202ENST00000424642 1267 ntBASIC18.21■□□□□ 0.51
CTSBP07858 CT47A1-201ENST00000433030 1288 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
CTSBP07858 PIGQ-209ENST00000470411 2112 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
CTSBP07858 SCPEP1-216ENST00000631024 444 ntTSL 5 BASIC18.21■□□□□ 0.51
CTSBP07858 P3H4-202ENST00000393928 2601 ntAPPRIS P2 TSL 1 (best) BASIC18.21■□□□□ 0.51
CTSBP07858 SNRPN-207ENST00000554227 1763 ntTSL 5 BASIC18.21■□□□□ 0.51
CTSBP07858 RELB-207ENST00000625761 2279 ntAPPRIS ALT2 TSL 5 BASIC18.21■□□□□ 0.51
CTSBP07858 PCMT1-203ENST00000367384 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
CTSBP07858 CCT5-205ENST00000506600 1939 ntTSL 2 BASIC18.21■□□□□ 0.51
CTSBP07858 FAM3A-215ENST00000447601 1800 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
CTSBP07858 ST3GAL3-205ENST00000347631 1324 ntTSL 5 BASIC18.21■□□□□ 0.51
CTSBP07858 TINCR-201ENST00000448587 3733 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
CTSBP07858 EIF2B1-201ENST00000424014 2477 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.5
CTSBP07858 CDC42EP2-201ENST00000279249 2023 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
CTSBP07858 CRYBB2P1-202ENST00000382734 1364 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
CTSBP07858 IQCJ-SCHIP1-204ENST00000485419 2445 ntAPPRIS ALT2 TSL 2 BASIC18.2■□□□□ 0.5
CTSBP07858 FKBP8-206ENST00000596558 1756 ntAPPRIS ALT1 TSL 2 BASIC18.2■□□□□ 0.5
CTSBP07858 AC139491.1-201ENST00000512675 1516 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
CTSBP07858 TPCN2-208ENST00000637342 2856 ntTSL 5 BASIC18.2■□□□□ 0.5
CTSBP07858 ERICH4-201ENST00000378187 946 ntAPPRIS P1 TSL 5 BASIC18.2■□□□□ 0.5
CTSBP07858 AC007663.1-201ENST00000438948 1240 ntBASIC18.2■□□□□ 0.5
CTSBP07858 PSMB5-205ENST00000493471 1117 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
CTSBP07858 RAB2A-211ENST00000531289 1058 ntTSL 2 BASIC18.2■□□□□ 0.5
CTSBP07858 CFL2-205ENST00000555765 632 ntTSL 2 BASIC18.2■□□□□ 0.5
CTSBP07858 MRM3-201ENST00000304478 1809 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
CTSBP07858 GOLGA6L5P-202ENST00000515341 1828 ntBASIC18.2■□□□□ 0.5
CTSBP07858 AKIP1-207ENST00000529876 1421 ntTSL 2 BASIC18.2■□□□□ 0.5
CTSBP07858 AC092338.2-201ENST00000568827 1415 ntBASIC18.2■□□□□ 0.5
CTSBP07858 RHBDL1-201ENST00000219551 1560 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
CTSBP07858 ALDOA-212ENST00000564546 2104 ntAPPRIS P2 TSL 1 (best) BASIC18.2■□□□□ 0.5
CTSBP07858 ENTPD8-204ENST00000472938 1749 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
CTSBP07858 PCID2-202ENST00000337344 1898 ntAPPRIS P1 TSL 2 BASIC18.2■□□□□ 0.5
CTSBP07858 DISC1-215ENST00000602281 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
CTSBP07858 SLC25A3-201ENST00000188376 1909 ntAPPRIS ALT1 TSL 1 (best) BASIC18.19■□□□□ 0.5
CTSBP07858 TM9SF1-203ENST00000524835 1938 ntTSL 2 BASIC18.19■□□□□ 0.5
CTSBP07858 TMEM8A-204ENST00000431232 3691 ntAPPRIS P2 TSL 1 (best) BASIC18.19■□□□□ 0.5
CTSBP07858 CHMP4A-201ENST00000347519 1393 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
CTSBP07858 ST3GAL3-204ENST00000335430 1805 ntTSL 5 BASIC18.19■□□□□ 0.5
CTSBP07858 FOXD4-201ENST00000382500 1974 ntAPPRIS P1 BASIC18.19■□□□□ 0.5
CTSBP07858 AC009133.6-201ENST00000609618 2252 ntAPPRIS P1 TSL 5 BASIC18.19■□□□□ 0.5
CTSBP07858 BRSK1-201ENST00000309383 3079 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
CTSBP07858 GPR162-201ENST00000311268 2768 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
CTSBP07858 LRRC23-202ENST00000323702 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
CTSBP07858 GSTZ1-204ENST00000393734 1424 ntTSL 5 BASIC18.19■□□□□ 0.5
CTSBP07858 TRPT1-203ENST00000394547 865 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
CTSBP07858 AC103564.1-201ENST00000437330 562 ntTSL 5 BASIC18.19■□□□□ 0.5
CTSBP07858 AZIN1-AS1-215ENST00000522939 644 ntTSL 2 BASIC18.19■□□□□ 0.5
CTSBP07858 PSMD9-208ENST00000542602 516 ntTSL 3 BASIC18.19■□□□□ 0.5
CTSBP07858 TK2-213ENST00000563369 882 ntTSL 5 BASIC18.19■□□□□ 0.5
CTSBP07858 AC093484.2-201ENST00000580996 2166 ntBASIC18.19■□□□□ 0.5
CTSBP07858 RBM42-202ENST00000586618 771 ntTSL 3 BASIC18.19■□□□□ 0.5
CTSBP07858 ISOC2-201ENST00000085068 1122 ntTSL 2 BASIC18.19■□□□□ 0.5
CTSBP07858 ANTXR1-203ENST00000409829 2221 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
CTSBP07858 KREMEN2-206ENST00000575885 1798 ntTSL 2 BASIC18.19■□□□□ 0.5
CTSBP07858 SCFD2-204ENST00000611795 1320 ntTSL 5 BASIC18.19■□□□□ 0.5
CTSBP07858 AP001922.1-201ENST00000499390 1504 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
CTSBP07858 IFNAR2-204ENST00000382264 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
CTSBP07858 ST3GAL4-203ENST00000392669 1724 ntAPPRIS ALT1 TSL 1 (best) BASIC18.18■□□□□ 0.5
CTSBP07858 NEIL3-201ENST00000264596 2408 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
CTSBP07858 ZNF584-202ENST00000322834 1042 ntTSL 2 BASIC18.18■□□□□ 0.5
CTSBP07858 UQCRQ-201ENST00000378665 586 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
CTSBP07858 TMEM88B-201ENST00000378821 492 ntAPPRIS P1 TSL 2 BASIC18.18■□□□□ 0.5
CTSBP07858 MIR1224-201ENST00000408193 85 ntBASIC18.18■□□□□ 0.5
CTSBP07858 AL445685.1-201ENST00000425802 762 ntTSL 3 BASIC18.18■□□□□ 0.5
CTSBP07858 AL137013.1-201ENST00000432946 1228 ntBASIC18.18■□□□□ 0.5
CTSBP07858 AC098864.1-204ENST00000513752 805 ntTSL 4 BASIC18.18■□□□□ 0.5
CTSBP07858 HRASLS5-205ENST00000539221 1167 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
CTSBP07858 CLN6-221ENST00000637494 765 ntTSL 5 BASIC18.18■□□□□ 0.5
CTSBP07858 CFAP77-203ENST00000393216 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
CTSBP07858 TBC1D3P2-202ENST00000577902 1649 ntBASIC18.18■□□□□ 0.5
CTSBP07858 MELTF-202ENST00000296351 1650 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
CTSBP07858 TEX21P-204ENST00000641479 1693 ntBASIC18.18■□□□□ 0.5
CTSBP07858 GSTM4-201ENST00000326729 1321 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
CTSBP07858 NECAB3-202ENST00000375238 1942 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
CTSBP07858 STXBP2-203ENST00000441779 1914 ntTSL 2 BASIC18.17■□□□□ 0.5
CTSBP07858 CYP2E1-205ENST00000463117 1912 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.5
CTSBP07858 UHRF1-203ENST00000615884 2651 ntAPPRIS P1 TSL 2 BASIC18.17■□□□□ 0.5
CTSBP07858 CACNA1H-210ENST00000638323 8048 ntAPPRIS ALT2 TSL 5 BASIC18.17■□□□□ 0.5
CTSBP07858 ZNF346-201ENST00000358149 2314 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
CTSBP07858 KCNMA1-252ENST00000639120 2308 ntTSL 5 BASIC18.17■□□□□ 0.5
CTSBP07858 ZFC3H1-206ENST00000548100 1771 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
CTSBP07858 FOXK2-201ENST00000335255 5265 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
CTSBP07858 HOXB8-201ENST00000239144 1823 ntAPPRIS P2 TSL 2 BASIC18.17■□□□□ 0.5
CTSBP07858 ABCC5-204ENST00000392579 1848 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
CTSBP07858 COMMD1-201ENST00000311832 911 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
CTSBP07858 DGCR6-201ENST00000331444 1214 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
CTSBP07858 INSIG1-202ENST00000342407 1127 ntTSL 2 BASIC18.17■□□□□ 0.5
CTSBP07858 AIF1L-203ENST00000372298 849 ntTSL 3 BASIC18.17■□□□□ 0.5
CTSBP07858 TIMM17B-201ENST00000376582 950 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
CTSBP07858 AL035541.1-201ENST00000424850 823 ntTSL 2 BASIC18.17■□□□□ 0.5
CTSBP07858 SLC25A1P2-201ENST00000430693 912 ntBASIC18.17■□□□□ 0.5
CTSBP07858 AL929554.1-201ENST00000568665 460 ntAPPRIS P1 TSL 3 BASIC18.17■□□□□ 0.5
CTSBP07858 KANSL1-AS1-203ENST00000572973 424 ntTSL 3 BASIC18.17■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 66.2 ms