Protein–RNA interactions for Protein: P04632

CAPNS1, Calpain small subunit 1, humanhuman

Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CAPNS1P04632 LEF1-AS1-203ENST00000507799 459 ntTSL 3 BASIC19.09■□□□□ 0.65
CAPNS1P04632 AC004080.2-201ENST00000523331 556 ntTSL 4 BASIC19.09■□□□□ 0.65
CAPNS1P04632 EEF2KMT-206ENST00000587133 873 ntAPPRIS ALT2 TSL 3 BASIC19.09■□□□□ 0.65
CAPNS1P04632 ZNF575-205ENST00000601282 1086 ntAPPRIS P1 TSL 2 BASIC19.09■□□□□ 0.65
CAPNS1P04632 AC027682.6-202ENST00000621378 795 ntTSL 2 BASIC19.09■□□□□ 0.65
CAPNS1P04632 VPS72-207ENST00000640458 689 ntTSL 5 BASIC19.09■□□□□ 0.65
CAPNS1P04632 TTC19-201ENST00000261647 3002 ntAPPRIS P2 TSL 1 (best) BASIC19.09■□□□□ 0.65
CAPNS1P04632 ISOC1-201ENST00000173527 1940 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
CAPNS1P04632 FAM216A-201ENST00000377673 1582 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
CAPNS1P04632 PCBP3-203ENST00000400308 1911 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
CAPNS1P04632 DTWD1-202ENST00000403028 1584 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
CAPNS1P04632 ACOT2-204ENST00000613168 1553 ntAPPRIS P5 TSL 1 (best) BASIC19.09■□□□□ 0.65
CAPNS1P04632 NUTM2D-201ENST00000381697 3290 ntAPPRIS P5 TSL 1 (best) BASIC19.09■□□□□ 0.65
CAPNS1P04632 Z82202.1-201ENST00000623446 1880 ntBASIC19.09■□□□□ 0.65
CAPNS1P04632 IFRD2-202ENST00000417626 2109 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
CAPNS1P04632 STX17-212ENST00000534052 2424 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
CAPNS1P04632 SLC1A6-202ENST00000430939 1794 ntTSL 2 BASIC19.09■□□□□ 0.65
CAPNS1P04632 FBXL12-205ENST00000586651 1736 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
CAPNS1P04632 CMTM7-201ENST00000334983 2038 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
CAPNS1P04632 PDLIM5-205ENST00000380180 2020 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
CAPNS1P04632 FBXO24-201ENST00000241071 2276 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
CAPNS1P04632 FGFR2-224ENST00000613048 4369 ntTSL 5 BASIC19.08■□□□□ 0.65
CAPNS1P04632 AOC3-204ENST00000591562 2522 ntTSL 2 BASIC19.08■□□□□ 0.65
CAPNS1P04632 PLSCR3-213ENST00000576362 1605 ntTSL 3 BASIC19.08■□□□□ 0.65
CAPNS1P04632 EIF5A-204ENST00000416016 1336 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
CAPNS1P04632 CTSH-201ENST00000220166 2190 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
CAPNS1P04632 GCGR-202ENST00000570996 1872 ntAPPRIS ALT2 TSL 2 BASIC19.08■□□□□ 0.65
CAPNS1P04632 SBK1-201ENST00000341901 4992 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
CAPNS1P04632 TMEM234-201ENST00000309777 1082 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
CAPNS1P04632 LCE3C-201ENST00000333881 425 ntAPPRIS P1 BASIC19.08■□□□□ 0.64
CAPNS1P04632 GPM6B-204ENST00000398361 1033 ntTSL 2 BASIC19.08■□□□□ 0.64
CAPNS1P04632 PSMB11-201ENST00000408907 2110 ntAPPRIS P1 BASIC19.08■□□□□ 0.64
CAPNS1P04632 AL450487.1-201ENST00000426799 995 ntBASIC19.08■□□□□ 0.64
CAPNS1P04632 LIN28AP1-201ENST00000429574 405 ntBASIC19.08■□□□□ 0.64
CAPNS1P04632 SNHG7-203ENST00000436596 509 ntTSL 2 BASIC19.08■□□□□ 0.64
CAPNS1P04632 BX664615.1-201ENST00000443558 458 ntBASIC19.08■□□□□ 0.64
CAPNS1P04632 AP002982.1-201ENST00000492365 877 ntBASIC19.08■□□□□ 0.64
CAPNS1P04632 LCE1C-202ENST00000607093 644 ntAPPRIS P2 BASIC19.08■□□□□ 0.64
CAPNS1P04632 H19-201ENST00000411754 1788 ntTSL 5 BASIC19.08■□□□□ 0.64
CAPNS1P04632 RHOA-202ENST00000418115 2031 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
CAPNS1P04632 LSR-214ENST00000621372 2274 ntAPPRIS P4 TSL 1 (best) BASIC19.08■□□□□ 0.64
CAPNS1P04632 NHLH2-201ENST00000320238 2512 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
CAPNS1P04632 ENTPD6-202ENST00000360031 2766 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.64
CAPNS1P04632 AC007383.3-201ENST00000453039 1411 ntTSL 3 BASIC19.08■□□□□ 0.64
CAPNS1P04632 CYTH1-209ENST00000589296 2159 ntTSL 5 BASIC19.08■□□□□ 0.64
CAPNS1P04632 CBX1-202ENST00000393408 2422 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
CAPNS1P04632 EPS8L1-203ENST00000540810 2360 ntTSL 2 BASIC19.07■□□□□ 0.64
CAPNS1P04632 PNKP-215ENST00000600910 1600 ntTSL 5 BASIC19.07■□□□□ 0.64
CAPNS1P04632 VAV1-210ENST00000602142 2620 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
CAPNS1P04632 EPS8L2-230ENST00000610855 1633 ntTSL 5 BASIC19.07■□□□□ 0.64
CAPNS1P04632 FBLN7-202ENST00000331203 2301 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
CAPNS1P04632 CEP78-201ENST00000277082 2542 ntAPPRIS ALT2 TSL 2 BASIC19.07■□□□□ 0.64
CAPNS1P04632 AC005082.1-201ENST00000413042 2259 ntBASIC19.07■□□□□ 0.64
CAPNS1P04632 ANTXR1-203ENST00000409829 2221 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
CAPNS1P04632 UBE2C-201ENST00000243893 476 ntTSL 2 BASIC19.07■□□□□ 0.64
CAPNS1P04632 VSIG2-202ENST00000403470 1191 ntTSL 2 BASIC19.07■□□□□ 0.64
CAPNS1P04632 SAPCD2P2-201ENST00000431719 1174 ntBASIC19.07■□□□□ 0.64
CAPNS1P04632 FP475955.1-201ENST00000624937 553 ntTSL 4 BASIC19.07■□□□□ 0.64
CAPNS1P04632 AP000550.4-202ENST00000639755 178 ntBASIC19.07■□□□□ 0.64
CAPNS1P04632 FAM69B-201ENST00000371691 2410 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
CAPNS1P04632 TMSB4X-203ENST00000380636 1702 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
CAPNS1P04632 CYGB-201ENST00000293230 2158 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
CAPNS1P04632 PTOV1-AS1-201ENST00000596521 2155 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
CAPNS1P04632 FHL1-219ENST00000618438 2178 ntTSL 3 BASIC19.07■□□□□ 0.64
CAPNS1P04632 CITED2-201ENST00000367651 2354 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
CAPNS1P04632 ANKRD24-201ENST00000262970 3711 ntAPPRIS ALT2 TSL 5 BASIC19.07■□□□□ 0.64
CAPNS1P04632 CCKBR-203ENST00000525462 2138 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
CAPNS1P04632 APLP2-204ENST00000345598 1862 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
CAPNS1P04632 DEDD2-204ENST00000595337 1894 ntAPPRIS P3 TSL 3 BASIC19.07■□□□□ 0.64
CAPNS1P04632 SCAMP3-201ENST00000302631 1446 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
CAPNS1P04632 MEF2B-203ENST00000410050 1429 ntTSL 5 BASIC19.07■□□□□ 0.64
CAPNS1P04632 INTS11-202ENST00000411962 1832 ntTSL 5 BASIC19.07■□□□□ 0.64
CAPNS1P04632 KRT19-201ENST00000361566 1390 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
CAPNS1P04632 PSPC1-201ENST00000338910 2407 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
CAPNS1P04632 PCDHB12-203ENST00000624949 1963 ntTSL 2 BASIC19.06■□□□□ 0.64
CAPNS1P04632 PSMD3-201ENST00000264639 2158 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
CAPNS1P04632 USP21-201ENST00000289865 2195 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
CAPNS1P04632 WDR37-203ENST00000381329 1307 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
CAPNS1P04632 PCMT1-203ENST00000367384 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
CAPNS1P04632 TRABD-201ENST00000303434 2329 ntAPPRIS P3 TSL 1 (best) BASIC19.06■□□□□ 0.64
CAPNS1P04632 SNAI3-AS1-202ENST00000563475 2081 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
CAPNS1P04632 MKRN1-208ENST00000474576 1661 ntTSL 5 BASIC19.06■□□□□ 0.64
CAPNS1P04632 TLCD1-201ENST00000292090 1017 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
CAPNS1P04632 SWI5-201ENST00000320188 980 ntAPPRIS P3 TSL 1 (best) BASIC19.06■□□□□ 0.64
CAPNS1P04632 TREX2-204ENST00000370212 861 ntTSL 5 BASIC19.06■□□□□ 0.64
CAPNS1P04632 TREX2-205ENST00000370231 1255 ntAPPRIS P1 TSL 5 BASIC19.06■□□□□ 0.64
CAPNS1P04632 INSL3-202ENST00000379695 899 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
CAPNS1P04632 TREX2-207ENST00000393862 907 ntAPPRIS P1 TSL 2 BASIC19.06■□□□□ 0.64
CAPNS1P04632 AC110769.1-201ENST00000420161 815 ntTSL 3 BASIC19.06■□□□□ 0.64
CAPNS1P04632 ICAM1-202ENST00000423829 1296 ntTSL 2 BASIC19.06■□□□□ 0.64
CAPNS1P04632 DCAKD-205ENST00000588499 990 ntAPPRIS P1 TSL 2 BASIC19.06■□□□□ 0.64
CAPNS1P04632 AC005906.2-206ENST00000638180 1029 ntTSL 5 BASIC19.06■□□□□ 0.64
CAPNS1P04632 CDH24-205ENST00000554034 2759 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
CAPNS1P04632 MCRS1-202ENST00000357123 1428 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
CAPNS1P04632 SMAD7-201ENST00000262158 3087 ntAPPRIS P3 TSL 1 (best) BASIC19.06■□□□□ 0.64
CAPNS1P04632 THOC3-201ENST00000265097 1589 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
CAPNS1P04632 TAF4-201ENST00000252996 4628 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
CAPNS1P04632 LDHD-201ENST00000300051 2067 ntAPPRIS P3 TSL 1 (best) BASIC19.05■□□□□ 0.64
CAPNS1P04632 UNC5D-204ENST00000420357 2966 ntTSL 5 BASIC19.05■□□□□ 0.64
CAPNS1P04632 TMCO6-203ENST00000394671 1887 ntAPPRIS P1 TSL 2 BASIC19.05■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 48.1 ms